RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 NTN5Q8WTR8 489 aaPredicted RBP12.35□□□□□ -0.43
CLN6-220ENST00000637450 AQP10Q96PS8 301 aa12.35□□□□□ -0.43
CLN6-220ENST00000637450 GTSF1LQ9H1H1 148 aa12.35□□□□□ -0.43
CLN6-220ENST00000637450 TMEM167BQ9NRX6 74 aa12.35□□□□□ -0.43
CLN6-220ENST00000637450 SRRM2Q9UQ35 2752 aaKnown RBP12.35□□□□□ -0.43
CLN6-220ENST00000637450 DMBT1Q9UGM3 2413 aaPredicted RBP12.35□□□□□ -0.43
CLN6-220ENST00000637450 CXorf1O96002 111 aa12.34□□□□□ -0.43
CLN6-220ENST00000637450 SMR3BP02814 79 aaPredicted RBP12.34□□□□□ -0.43
CLN6-220ENST00000637450 MGST1P10620 155 aaKnown RBP12.34□□□□□ -0.43
CLN6-220ENST00000637450 ZFP69Q49AA0 526 aa12.34□□□□□ -0.43
CLN6-220ENST00000637450 CYB561D1Q8N8Q1 229 aa12.34□□□□□ -0.43
CLN6-220ENST00000637450 TNFSF18Q9UNG2 199 aa12.34□□□□□ -0.43
CLN6-220ENST00000637450 IGHV3-30P01768 117 aa12.33□□□□□ -0.44
CLN6-220ENST00000637450 IGHV3-33P01772 117 aa12.33□□□□□ -0.44
CLN6-220ENST00000637450 IGHV3-30-3P0DP02 117 aa12.33□□□□□ -0.44
CLN6-220ENST00000637450 IGHV3-30-5P0DP03 117 aa12.33□□□□□ -0.44
CLN6-220ENST00000637450 SAPCD1Q5SSQ6 148 aa12.33□□□□□ -0.44
CLN6-220ENST00000637450 Q8N814 137 aa12.33□□□□□ -0.44
CLN6-220ENST00000637450 ATP6V0E2Q8NHE4 81 aa12.33□□□□□ -0.44
CLN6-220ENST00000637450 ACTR3CQ9C0K3 210 aaPredicted RBP12.33□□□□□ -0.44
CLN6-220ENST00000637450 Q9HAA7 133 aa12.33□□□□□ -0.44
CLN6-220ENST00000637450 Q6ZSN1 163 aa12.32□□□□□ -0.44
CLN6-220ENST00000637450 TMEM70Q9BUB7 260 aa12.32□□□□□ -0.44
CLN6-220ENST00000637450 SH3BGRL3Q9H299 93 aa12.32□□□□□ -0.44
CLN6-220ENST00000637450 IGKV3D-20A0A0C4DH25 116 aa12.31□□□□□ -0.44
CLN6-220ENST00000637450 A0A1W2PRE2 83 aa12.31□□□□□ -0.44
CLN6-220ENST00000637450 Q5BKY6 102 aa12.31□□□□□ -0.44
CLN6-220ENST00000637450 LINC00479Q96M42 142 aa12.31□□□□□ -0.44
CLN6-220ENST00000637450 HAMPP81172 84 aa12.3□□□□□ -0.44
CLN6-220ENST00000637450 LAGE3Q14657 143 aa12.3□□□□□ -0.44
CLN6-220ENST00000637450 PIK3CD-AS1Q5SR53 167 aa12.3□□□□□ -0.44
CLN6-220ENST00000637450 ZFP2Q6ZN57 461 aa12.3□□□□□ -0.44
CLN6-220ENST00000637450 MED28Q9H204 178 aa12.3□□□□□ -0.44
CLN6-220ENST00000637450 PARLQ9H300 379 aa12.3□□□□□ -0.44
CLN6-220ENST00000637450 TRAV34A0A0B4J273 112 aa12.29□□□□□ -0.44
CLN6-220ENST00000637450 A8MWV9 139 aa12.29□□□□□ -0.44
CLN6-220ENST00000637450 FAM229AH3BQW9 127 aa12.29□□□□□ -0.44
CLN6-220ENST00000637450 FABP5P3A8MUU1 101 aa12.28□□□□□ -0.44
CLN6-220ENST00000637450 LINC00694P0DN24 101 aa12.28□□□□□ -0.44
CLN6-220ENST00000637450 S100A4P26447 101 aaKnown RBP12.28□□□□□ -0.44
CLN6-220ENST00000637450 TM2D2Q9BX73 214 aa12.28□□□□□ -0.44
CLN6-220ENST00000637450 ARL2-SNX15V9GYD0 113 aa12.28□□□□□ -0.44
CLN6-220ENST00000637450 FLG2Q5D862 2391 aaPredicted RBP12.28□□□□□ -0.44
CLN6-220ENST00000637450 GAGE12JA6NER3 117 aa12.27□□□□□ -0.45
CLN6-220ENST00000637450 ASIPP42127 132 aa12.27□□□□□ -0.45
CLN6-220ENST00000637450 GAGE1Q13065 139 aa12.27□□□□□ -0.45
CLN6-220ENST00000637450 GAGE4Q13068 117 aa12.27□□□□□ -0.45
CLN6-220ENST00000637450 GAGE5Q13069 117 aa12.27□□□□□ -0.45
CLN6-220ENST00000637450 ZNF726P1Q15940 193 aa12.27□□□□□ -0.45
CLN6-220ENST00000637450 LGALSLQ3ZCW2 172 aaPredicted RBP12.27□□□□□ -0.45
CLN6-220ENST00000637450 GAGE13Q4V321 117 aa12.27□□□□□ -0.45
CLN6-220ENST00000637450 RPL7L1Q6DKI1 246 aaKnown RBP12.27□□□□□ -0.45
CLN6-220ENST00000637450 UFSP1Q6NVU6 142 aa12.27□□□□□ -0.45
CLN6-220ENST00000637450 Q8N3U1 123 aa12.27□□□□□ -0.45
CLN6-220ENST00000637450 FAM30AQ9NZY2 134 aa12.27□□□□□ -0.45
CLN6-220ENST00000637450 PTTG1O95997 202 aa12.26□□□□□ -0.45
CLN6-220ENST00000637450 IFNA7P01567 189 aa12.26□□□□□ -0.45
CLN6-220ENST00000637450 INO80EQ8NBZ0 244 aaPredicted RBP12.26□□□□□ -0.45
CLN6-220ENST00000637450 OR2T35Q8NGX2 323 aa12.26□□□□□ -0.45
CLN6-220ENST00000637450 JPT2Q9H910 190 aa12.26□□□□□ -0.45
CLN6-220ENST00000637450 IL36BQ9NZH7 164 aa12.26□□□□□ -0.45
CLN6-220ENST00000637450 Q9UF83 564 aa12.26□□□□□ -0.45
CLN6-220ENST00000637450 CTXND1A0A1B0GTU2 59 aa12.25□□□□□ -0.45
CLN6-220ENST00000637450 RNF222A6NCQ9 220 aa12.25□□□□□ -0.45
CLN6-220ENST00000637450 C1QBP02746 253 aa12.25□□□□□ -0.45
CLN6-220ENST00000637450 GIPP09681 153 aaPredicted RBP12.25□□□□□ -0.45
CLN6-220ENST00000637450 SAMD10Q9BYL1 202 aa12.25□□□□□ -0.45
CLN6-220ENST00000637450 TRAV8-3A0A0A6YYJ7 113 aa12.24□□□□□ -0.45
CLN6-220ENST00000637450 BORCS7-ASMTA0A0B4J1R7 106 aa12.24□□□□□ -0.45
CLN6-220ENST00000637450 B4DEV8 164 aa12.24□□□□□ -0.45
CLN6-220ENST00000637450 PEX7O00628 323 aa12.24□□□□□ -0.45
CLN6-220ENST00000637450 CRIP1P50238 77 aa12.24□□□□□ -0.45
CLN6-220ENST00000637450 FGF8P55075 233 aaPredicted RBP12.24□□□□□ -0.45
CLN6-220ENST00000637450 UBE2G2P60604 165 aa12.24□□□□□ -0.45
CLN6-220ENST00000637450 WFDC2Q14508 124 aa12.24□□□□□ -0.45
CLN6-220ENST00000637450 DNLZQ5SXM8 178 aa12.24□□□□□ -0.45
CLN6-220ENST00000637450 DMRTA1Q5VZB9 504 aa12.24□□□□□ -0.45
CLN6-220ENST00000637450 C14orf178Q8N769 122 aaPredicted RBP12.24□□□□□ -0.45
CLN6-220ENST00000637450 NKX6-2Q9C056 277 aaPredicted RBP12.24□□□□□ -0.45
CLN6-220ENST00000637450 A0A087WWC5 75 aa12.23□□□□□ -0.45
CLN6-220ENST00000637450 FAM74A7A6NL05 159 aa12.23□□□□□ -0.45
CLN6-220ENST00000637450 COX8CQ7Z4L0 72 aa12.23□□□□□ -0.45
CLN6-220ENST00000637450 DAZ4Q86SG3 579 aaKnown RBP12.23□□□□□ -0.45
CLN6-220ENST00000637450 Q86TA4 180 aa12.23□□□□□ -0.45
CLN6-220ENST00000637450 HIST1H2BAQ96A08 127 aa12.23□□□□□ -0.45
CLN6-220ENST00000637450 DAZ3Q9NR90 486 aaKnown RBP12.23□□□□□ -0.45
CLN6-220ENST00000637450 KRBOX1C9JBD0 128 aa12.22□□□□□ -0.45
CLN6-220ENST00000637450 ARMS2P0C7Q2 107 aa12.22□□□□□ -0.45
CLN6-220ENST00000637450 TOR2AQ5JU69 321 aa12.22□□□□□ -0.45
CLN6-220ENST00000637450 ZC2HC1AQ96GY0 325 aa12.22□□□□□ -0.45
CLN6-220ENST00000637450 BATF3Q9NR55 127 aa12.22□□□□□ -0.45
CLN6-220ENST00000637450 FXYD6-FXYD2A0A087WZ82 144 aa12.21□□□□□ -0.45
CLN6-220ENST00000637450 H3BVH4 76 aa12.21□□□□□ -0.45
CLN6-220ENST00000637450 SYT8Q8NBV8 401 aa12.21□□□□□ -0.45
CLN6-220ENST00000637450 ZFP30Q9Y2G7 519 aa12.21□□□□□ -0.45
CLN6-220ENST00000637450 RHODO00212 210 aa12.2□□□□□ -0.46
CLN6-220ENST00000637450 GRIFINA4D1Z8 144 aa12.19□□□□□ -0.46
CLN6-220ENST00000637450 M0R036 132 aa12.19□□□□□ -0.46
CLN6-220ENST00000637450 LECT2O14960 151 aa12.19□□□□□ -0.46
CLN6-220ENST00000637450 SH2D1AO60880 128 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms