RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 ZMAT4Q9H898 229 aa9.11□□□□□ -0.95
CLN8-212ENST00000637083 ZNF702PQ9H963 129 aa9.11□□□□□ -0.95
CLN8-212ENST00000637083 LINC01549A6NIU2 74 aa9.1□□□□□ -0.95
CLN8-212ENST00000637083 NXPH4O95158 308 aa9.1□□□□□ -0.95
CLN8-212ENST00000637083 IGKCP01834 107 aa9.1□□□□□ -0.95
CLN8-212ENST00000637083 RNASE3P12724 160 aaKnown RBP9.1□□□□□ -0.95
CLN8-212ENST00000637083 DEFB1P60022 68 aa9.1□□□□□ -0.95
CLN8-212ENST00000637083 ODF1Q14990 250 aa9.1□□□□□ -0.95
CLN8-212ENST00000637083 C7orf71A4D174 169 aa9.1□□□□□ -0.95
CLN8-212ENST00000637083 K7EQG2 157 aa9.1□□□□□ -0.95
CLN8-212ENST00000637083 HOXA3O43365 443 aaPredicted RBP9.1□□□□□ -0.95
CLN8-212ENST00000637083 GNRH2O43555 120 aa9.1□□□□□ -0.95
CLN8-212ENST00000637083 DPM2O94777 84 aa9.1□□□□□ -0.95
CLN8-212ENST00000637083 SEC11AP67812 179 aa9.1□□□□□ -0.95
CLN8-212ENST00000637083 C14orf178Q8N769 122 aaPredicted RBP9.1□□□□□ -0.95
CLN8-212ENST00000637083 FOXC2Q99958 501 aa9.1□□□□□ -0.95
CLN8-212ENST00000637083 DKK2Q9UBU2 259 aa9.1□□□□□ -0.95
CLN8-212ENST00000637083 NBPF19A0A087WUL8 3843 aa9.09□□□□□ -0.95
CLN8-212ENST00000637083 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.09□□□□□ -0.95
CLN8-212ENST00000637083 MGPP08493 103 aa9.09□□□□□ -0.95
CLN8-212ENST00000637083 POM121L12Q8N7R1 296 aa9.09□□□□□ -0.95
CLN8-212ENST00000637083 HELZ2Q9BYK8 2649 aaKnown RBP9.09□□□□□ -0.95
CLN8-212ENST00000637083 A0A0J9YX75 114 aa9.09□□□□□ -0.95
CLN8-212ENST00000637083 FGF6P10767 208 aa9.09□□□□□ -0.95
CLN8-212ENST00000637083 SYNJ2BPP57105 145 aa9.09□□□□□ -0.95
CLN8-212ENST00000637083 TMEM97Q5BJF2 176 aa9.09□□□□□ -0.95
CLN8-212ENST00000637083 C10orf99Q6UWK7 81 aa9.09□□□□□ -0.95
CLN8-212ENST00000637083 C2orf91Q6ZV80 131 aa9.09□□□□□ -0.95
CLN8-212ENST00000637083 IGHV4OR15-8A0A075B7B6 117 aa9.08□□□□□ -0.96
CLN8-212ENST00000637083 A0A087WW49 117 aa9.08□□□□□ -0.96
CLN8-212ENST00000637083 ZNF688P0C7X2 276 aa9.08□□□□□ -0.96
CLN8-212ENST00000637083 HOXD3P31249 432 aaPredicted RBP9.08□□□□□ -0.96
CLN8-212ENST00000637083 RPL32P62910 135 aaKnown RBP9.08□□□□□ -0.96
CLN8-212ENST00000637083 ZNF124Q15973 351 aa9.08□□□□□ -0.96
CLN8-212ENST00000637083 SYT8Q8NBV8 401 aa9.08□□□□□ -0.96
CLN8-212ENST00000637083 RASL10AQ92737 203 aa9.08□□□□□ -0.96
CLN8-212ENST00000637083 MXRA5Q9NR99 2828 aa9.08□□□□□ -0.96
CLN8-212ENST00000637083 A0A087WX48 190 aa9.07□□□□□ -0.96
CLN8-212ENST00000637083 TRAV12-1A0A0B4J245 112 aa9.07□□□□□ -0.96
CLN8-212ENST00000637083 TRAV12-3A0A0B4J271 114 aa9.07□□□□□ -0.96
CLN8-212ENST00000637083 CD7P09564 240 aa9.07□□□□□ -0.96
CLN8-212ENST00000637083 NPSP0C0P6 89 aa9.07□□□□□ -0.96
CLN8-212ENST00000637083 HLA-DRB4P13762 266 aa9.07□□□□□ -0.96
CLN8-212ENST00000637083 EDN2P20800 178 aa9.07□□□□□ -0.96
CLN8-212ENST00000637083 CDKN1BP46527 198 aa9.07□□□□□ -0.96
CLN8-212ENST00000637083 NMUP48645 174 aa9.07□□□□□ -0.96
CLN8-212ENST00000637083 HSD52Q0P140 79 aa9.07□□□□□ -0.96
CLN8-212ENST00000637083 Q8N2B8 174 aa9.07□□□□□ -0.96
CLN8-212ENST00000637083 HLA-DRB4X5D2U9 266 aa9.07□□□□□ -0.96
CLN8-212ENST00000637083 A6NDN8 102 aa9.07□□□□□ -0.96
CLN8-212ENST00000637083 PLNP26678 52 aa9.07□□□□□ -0.96
CLN8-212ENST00000637083 FOXI2Q6ZQN5 318 aa9.07□□□□□ -0.96
CLN8-212ENST00000637083 TMEM86BQ8N661 226 aa9.07□□□□□ -0.96
CLN8-212ENST00000637083 TOMM6Q96B49 74 aa9.07□□□□□ -0.96
CLN8-212ENST00000637083 Q96MF0 132 aa9.07□□□□□ -0.96
CLN8-212ENST00000637083 PEMTQ9UBM1 199 aa9.07□□□□□ -0.96
CLN8-212ENST00000637083 TP73-AS1Q9UF72 201 aa9.07□□□□□ -0.96
CLN8-212ENST00000637083 PTTG1IPP53801 180 aa9.06□□□□□ -0.96
CLN8-212ENST00000637083 UBE2V1Q13404 147 aa9.06□□□□□ -0.96
CLN8-212ENST00000637083 ZNF469Q96JG9 3925 aaPredicted RBP9.06□□□□□ -0.96
CLN8-212ENST00000637083 CREBBPQ92793 2442 aa9.06□□□□□ -0.96
CLN8-212ENST00000637083 TRAV2A0A0B4J234 112 aa9.05□□□□□ -0.96
CLN8-212ENST00000637083 SCGB3A1Q96QR1 104 aa9.05□□□□□ -0.96
CLN8-212ENST00000637083 HHLA3Q9XRX5 114 aa9.05□□□□□ -0.96
CLN8-212ENST00000637083 TEX15Q9BXT5 2789 aa9.05□□□□□ -0.96
CLN8-212ENST00000637083 H7C1H1 209 aa9.05□□□□□ -0.96
CLN8-212ENST00000637083 TAX1BP3O14907 124 aa9.05□□□□□ -0.96
CLN8-212ENST00000637083 HIGD1BQ9P298 99 aa9.05□□□□□ -0.96
CLN8-212ENST00000637083 SELENOKQ9Y6D0 94 aa9.05□□□□□ -0.96
CLN8-212ENST00000637083 KIF25-AS1Q9Y6Z4 181 aa9.05□□□□□ -0.96
CLN8-212ENST00000637083 APCP25054 2843 aa9.05□□□□□ -0.96
CLN8-212ENST00000637083 TRGV11A0A075B6L2 103 aa9.04□□□□□ -0.96
CLN8-212ENST00000637083 IGHV1OR15-1A0A075B7D0 117 aa9.04□□□□□ -0.96
CLN8-212ENST00000637083 LINC01619G3V211 115 aa9.04□□□□□ -0.96
CLN8-212ENST00000637083 TCTEX1D4Q5JR98 221 aa9.04□□□□□ -0.96
CLN8-212ENST00000637083 ZC2HC1BQ5TFG8 222 aa9.04□□□□□ -0.96
CLN8-212ENST00000637083 RPL39LQ96EH5 51 aaKnown RBP9.04□□□□□ -0.96
CLN8-212ENST00000637083 C9orf85Q96MD7 179 aa9.04□□□□□ -0.96
CLN8-212ENST00000637083 TMEM160Q9NX00 188 aa9.04□□□□□ -0.96
CLN8-212ENST00000637083 MRPL35Q9NZE8 188 aaKnown RBP9.04□□□□□ -0.96
CLN8-212ENST00000637083 IGHV3-16A0A0C4DH30 117 aa9.04□□□□□ -0.96
CLN8-212ENST00000637083 F8VRH5 84 aa9.04□□□□□ -0.96
CLN8-212ENST00000637083 VAMP3Q15836 100 aa9.04□□□□□ -0.96
CLN8-212ENST00000637083 CSTL1Q9H114 145 aa9.04□□□□□ -0.96
CLN8-212ENST00000637083 DOPEY2Q9Y3R5 2298 aa9.03□□□□□ -0.96
CLN8-212ENST00000637083 VCYO14598 125 aa9.03□□□□□ -0.96
CLN8-212ENST00000637083 C2orf66Q6UXQ4 117 aa9.03□□□□□ -0.96
CLN8-212ENST00000637083 ERASQ7Z444 233 aa9.03□□□□□ -0.96
CLN8-212ENST00000637083 C4orf3Q8WVX3 66 aa9.03□□□□□ -0.96
CLN8-212ENST00000637083 KIR2DL4Q99706 377 aa9.03□□□□□ -0.96
CLN8-212ENST00000637083 F5H697 171 aa9.02□□□□□ -0.97
CLN8-212ENST00000637083 SPRY2O43597 315 aa9.02□□□□□ -0.97
CLN8-212ENST00000637083 LINC00315P59091 139 aa9.02□□□□□ -0.97
CLN8-212ENST00000637083 ADAMTSL5Q6ZMM2 481 aa9.02□□□□□ -0.97
CLN8-212ENST00000637083 PCP2Q8IVA1 136 aa9.02□□□□□ -0.97
CLN8-212ENST00000637083 DUX5Q96PT3 197 aa9.02□□□□□ -0.97
CLN8-212ENST00000637083 CYSLTR1Q9Y271 337 aa9.02□□□□□ -0.97
CLN8-212ENST00000637083 CHTOPQ9Y3Y2 248 aaKnown RBP9.02□□□□□ -0.97
CLN8-212ENST00000637083 TENM4Q6N022 2769 aa9.02□□□□□ -0.97
CLN8-212ENST00000637083 IGKV3-20P01619 116 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms