RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 GOLT1AQ6ZVE7 132 aa8.85□□□□□ -0.99
CLN6-217ENST00000636964 ATP5L2Q7Z4Y8 100 aa8.85□□□□□ -0.99
CLN6-217ENST00000636964 NF1P21359 2839 aa8.85□□□□□ -0.99
CLN6-217ENST00000636964 A0A1W2PPM0 123 aa8.85□□□□□ -0.99
CLN6-217ENST00000636964 MRPS12O15235 138 aaKnown RBP8.85□□□□□ -0.99
CLN6-217ENST00000636964 IGHG2P01859 326 aa8.85□□□□□ -0.99
CLN6-217ENST00000636964 XGP55808 180 aa8.85□□□□□ -0.99
CLN6-217ENST00000636964 WFDC2Q14508 124 aa8.85□□□□□ -0.99
CLN6-217ENST00000636964 TTC32Q5I0X7 151 aa8.85□□□□□ -0.99
CLN6-217ENST00000636964 PGLYRP4Q96LB8 373 aa8.85□□□□□ -0.99
CLN6-217ENST00000636964 V9GYY9 64 aa8.85□□□□□ -0.99
CLN6-217ENST00000636964 A0A096LNJ9 63 aa8.84□□□□□ -0.99
CLN6-217ENST00000636964 TRBV12-3P01733 135 aa8.84□□□□□ -0.99
CLN6-217ENST00000636964 C19orf54Q5BKX5 351 aa8.84□□□□□ -0.99
CLN6-217ENST00000636964 CIARTQ8N365 385 aaPredicted RBP8.84□□□□□ -0.99
CLN6-217ENST00000636964 OTORQ9NRC9 128 aa8.84□□□□□ -0.99
CLN6-217ENST00000636964 ITPR3Q14573 2671 aa8.84□□□□□ -0.99
CLN6-217ENST00000636964 ORM1P02763 201 aa8.84□□□□□ -0.99
CLN6-217ENST00000636964 FAM159AQ6UWV7 190 aa8.84□□□□□ -0.99
CLN6-217ENST00000636964 KRTAP1-3Q8IUG1 177 aa8.84□□□□□ -0.99
CLN6-217ENST00000636964 WFDC11Q8NEX6 87 aa8.84□□□□□ -0.99
CLN6-217ENST00000636964 ZNF747Q9BV97 191 aa8.84□□□□□ -0.99
CLN6-217ENST00000636964 CSN3P07498 182 aa8.83□□□□□ -1
CLN6-217ENST00000636964 PRSS22Q9GZN4 317 aa8.83□□□□□ -1
CLN6-217ENST00000636964 FLNBO75369 2602 aaKnown RBP8.83□□□□□ -1
CLN6-217ENST00000636964 APOHP02749 345 aaPredicted RBP8.83□□□□□ -1
CLN6-217ENST00000636964 IGF1P05019 195 aa8.83□□□□□ -1
CLN6-217ENST00000636964 INSL3P51460 131 aa8.83□□□□□ -1
CLN6-217ENST00000636964 PRNTQ86SH4 94 aa8.83□□□□□ -1
CLN6-217ENST00000636964 PSMG3-AS1Q96PY0 264 aa8.83□□□□□ -1
CLN6-217ENST00000636964 ZFAND3Q9H8U3 227 aa8.83□□□□□ -1
CLN6-217ENST00000636964 ITPR2Q14571 2701 aa8.83□□□□□ -1
CLN6-217ENST00000636964 TRBV7-1A0A0A6YYK4 115 aa8.83□□□□□ -1
CLN6-217ENST00000636964 Q6AWC8 147 aa8.83□□□□□ -1
CLN6-217ENST00000636964 IL17RELQ6ZVW7 336 aa8.83□□□□□ -1
CLN6-217ENST00000636964 MLST8Q9BVC4 326 aa8.83□□□□□ -1
CLN6-217ENST00000636964 SMAD5-AS1Q9Y6J3 95 aa8.83□□□□□ -1
CLN6-217ENST00000636964 NDUFV3P56181 108 aaKnown RBP8.82□□□□□ -1
CLN6-217ENST00000636964 MAP1LC3AQ9H492 121 aa8.82□□□□□ -1
CLN6-217ENST00000636964 KLF12Q9Y4X4 402 aa8.82□□□□□ -1
CLN6-217ENST00000636964 C9JAW5 83 aa8.82□□□□□ -1
CLN6-217ENST00000636964 HLA-DMBP28068 263 aa8.82□□□□□ -1
CLN6-217ENST00000636964 KLK9Q2XQG4 91 aa8.82□□□□□ -1
CLN6-217ENST00000636964 C10orf99Q6UWK7 81 aa8.82□□□□□ -1
CLN6-217ENST00000636964 KLK9Q9UKQ9 250 aa8.82□□□□□ -1
CLN6-217ENST00000636964 C19orf71A6NCJ1 209 aa8.82□□□□□ -1
CLN6-217ENST00000636964 CDIP1Q9H305 208 aa8.82□□□□□ -1
CLN6-217ENST00000636964 JMJD1CQ15652 2540 aa8.81□□□□□ -1
CLN6-217ENST00000636964 CLPSL1A2RUU4 121 aa8.81□□□□□ -1
CLN6-217ENST00000636964 CRIP2P52943 208 aaPredicted RBP8.81□□□□□ -1
CLN6-217ENST00000636964 DUX3Q96PT4 197 aa8.81□□□□□ -1
CLN6-217ENST00000636964 RPP21Q9H633 154 aaKnown RBP8.81□□□□□ -1
CLN6-217ENST00000636964 EDA2RQ9HAV5 297 aa8.81□□□□□ -1
CLN6-217ENST00000636964 TINCRA0A1B0GVN0 87 aa8.81□□□□□ -1
CLN6-217ENST00000636964 J3KT08 172 aa8.81□□□□□ -1
CLN6-217ENST00000636964 OR5AL1P0C617 328 aa8.81□□□□□ -1
CLN6-217ENST00000636964 PCP2Q8IVA1 136 aa8.81□□□□□ -1
CLN6-217ENST00000636964 FMC1Q96HJ9 113 aa8.81□□□□□ -1
CLN6-217ENST00000636964 FLNAP21333 2647 aaKnown RBP8.81□□□□□ -1
CLN6-217ENST00000636964 FAM223BA6NKX1 122 aa8.8□□□□□ -1
CLN6-217ENST00000636964 IGLV2-11P01706 119 aa8.8□□□□□ -1
CLN6-217ENST00000636964 FAM223AQ8IWN6 122 aa8.8□□□□□ -1
CLN6-217ENST00000636964 ZNF785A8K8V0 405 aa8.8□□□□□ -1
CLN6-217ENST00000636964 F8W1H4 67 aa8.8□□□□□ -1
CLN6-217ENST00000636964 LTAP01374 205 aa8.8□□□□□ -1
CLN6-217ENST00000636964 AAMDCQ9H7C9 122 aa8.8□□□□□ -1
CLN6-217ENST00000636964 PKIGQ9Y2B9 76 aa8.8□□□□□ -1
CLN6-217ENST00000636964 BUB3O43684 328 aa8.8□□□□□ -1
CLN6-217ENST00000636964 ZNF415Q09FC8 603 aa8.8□□□□□ -1
CLN6-217ENST00000636964 UNQ9165/PRO28630Q6UXU0 137 aa8.8□□□□□ -1
CLN6-217ENST00000636964 Q86TA4 180 aa8.8□□□□□ -1
CLN6-217ENST00000636964 GCN1Q92616 2671 aaKnown RBP8.79□□□□□ -1
CLN6-217ENST00000636964 A0A0U1RRA0 63 aa8.79□□□□□ -1
CLN6-217ENST00000636964 K7EMI3 77 aa8.79□□□□□ -1
CLN6-217ENST00000636964 HOXA3O43365 443 aaPredicted RBP8.79□□□□□ -1
CLN6-217ENST00000636964 FXYD7P58549 80 aa8.79□□□□□ -1
CLN6-217ENST00000636964 BAALCQ8WXS3 180 aa8.79□□□□□ -1
CLN6-217ENST00000636964 IGKV2-40A0A087WW87 121 aaPredicted RBP8.79□□□□□ -1
CLN6-217ENST00000636964 K7ERJ3 54 aa8.79□□□□□ -1
CLN6-217ENST00000636964 IGKV2D-40P01614 121 aaPredicted RBP8.79□□□□□ -1
CLN6-217ENST00000636964 SAMD5Q5TGI4 173 aa8.79□□□□□ -1
CLN6-217ENST00000636964 OR4X2Q8NGF9 303 aa8.79□□□□□ -1
CLN6-217ENST00000636964 TMEM101Q96IK0 257 aa8.79□□□□□ -1
CLN6-217ENST00000636964 LINC00477Q96M19 166 aa8.79□□□□□ -1
CLN6-217ENST00000636964 PDZD2O15018 2839 aa8.79□□□□□ -1
CLN6-217ENST00000636964 IFITM1P13164 125 aa8.79□□□□□ -1
CLN6-217ENST00000636964 GAGE2BQ13066 116 aa8.79□□□□□ -1
CLN6-217ENST00000636964 GAGE2EQ4V326 116 aa8.79□□□□□ -1
CLN6-217ENST00000636964 METTL26Q96S19 204 aa8.79□□□□□ -1
CLN6-217ENST00000636964 VGLL1Q99990 258 aa8.79□□□□□ -1
CLN6-217ENST00000636964 GAGE2DQ9UEU5 116 aa8.79□□□□□ -1
CLN6-217ENST00000636964 HIVEP2P31629 2446 aa8.78□□□□□ -1
CLN6-217ENST00000636964 FSHBP01225 129 aa8.78□□□□□ -1
CLN6-217ENST00000636964 LYPD1Q8N2G4 141 aa8.78□□□□□ -1
CLN6-217ENST00000636964 RNF182Q8N6D2 247 aa8.78□□□□□ -1
CLN6-217ENST00000636964 A8MWL6 223 aa8.78□□□□□ -1
CLN6-217ENST00000636964 EVI2AP22794 236 aa8.78□□□□□ -1
CLN6-217ENST00000636964 FXYD2P54710 66 aa8.78□□□□□ -1
CLN6-217ENST00000636964 Q6YL49 198 aa8.78□□□□□ -1
CLN6-217ENST00000636964 RBPMS2Q6ZRY4 209 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms