RNA–Protein interactions for RNA: ENST00000636934.1

CLN8-211, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-211ENST00000636934 NAV2Q8IVL1 2488 aa13.84□□□□□ -0.19
CLN8-211ENST00000636934 PRSS1P07477 247 aa13.84□□□□□ -0.19
CLN8-211ENST00000636934 FOXI2Q6ZQN5 318 aa13.84□□□□□ -0.19
CLN8-211ENST00000636934 POM121L12Q8N7R1 296 aa13.84□□□□□ -0.19
CLN8-211ENST00000636934 PEMTQ9UBM1 199 aa13.84□□□□□ -0.19
CLN8-211ENST00000636934 TRAV12-3A0A0B4J271 114 aa13.83□□□□□ -0.19
CLN8-211ENST00000636934 LINC01619G3V211 115 aa13.83□□□□□ -0.19
CLN8-211ENST00000636934 MGPP08493 103 aa13.83□□□□□ -0.19
CLN8-211ENST00000636934 SUMO2P61956 95 aaKnown RBP13.83□□□□□ -0.19
CLN8-211ENST00000636934 ZFHX3Q15911 3703 aa13.83□□□□□ -0.2
CLN8-211ENST00000636934 POLQO75417 2590 aa13.83□□□□□ -0.2
CLN8-211ENST00000636934 PTPN13Q12923 2485 aa13.83□□□□□ -0.2
CLN8-211ENST00000636934 TRAV2A0A0B4J234 112 aa13.83□□□□□ -0.2
CLN8-211ENST00000636934 CDKN1BP46527 198 aa13.83□□□□□ -0.2
CLN8-211ENST00000636934 GAGE1Q13065 139 aa13.83□□□□□ -0.2
CLN8-211ENST00000636934 TCTEX1D4Q5JR98 221 aa13.83□□□□□ -0.2
CLN8-211ENST00000636934 C4orf3Q8WVX3 66 aa13.83□□□□□ -0.2
CLN8-211ENST00000636934 NUDT3O95989 172 aa13.82□□□□□ -0.2
CLN8-211ENST00000636934 CD7P09564 240 aa13.82□□□□□ -0.2
CLN8-211ENST00000636934 RASL10AQ92737 203 aa13.82□□□□□ -0.2
CLN8-211ENST00000636934 ODF1Q14990 250 aa13.81□□□□□ -0.2
CLN8-211ENST00000636934 ANKRD39Q53RE8 183 aa13.81□□□□□ -0.2
CLN8-211ENST00000636934 DUX5Q96PT3 197 aa13.81□□□□□ -0.2
CLN8-211ENST00000636934 G0S2P27469 103 aa13.81□□□□□ -0.2
CLN8-211ENST00000636934 SYT8Q8NBV8 401 aa13.81□□□□□ -0.2
CLN8-211ENST00000636934 TMEM208Q9BTX3 173 aa13.81□□□□□ -0.2
CLN8-211ENST00000636934 ZMAT4Q9H898 229 aa13.81□□□□□ -0.2
CLN8-211ENST00000636934 DLEU1O43261 78 aa13.8□□□□□ -0.2
CLN8-211ENST00000636934 FOXC2Q99958 501 aa13.8□□□□□ -0.2
CLN8-211ENST00000636934 DKK2Q9UBU2 259 aa13.8□□□□□ -0.2
CLN8-211ENST00000636934 CREBBPQ92793 2442 aa13.8□□□□□ -0.2
CLN8-211ENST00000636934 IGHV1OR15-1A0A075B7D0 117 aa13.79□□□□□ -0.2
CLN8-211ENST00000636934 DPM2O94777 84 aa13.79□□□□□ -0.2
CLN8-211ENST00000636934 SLURP1P55000 103 aa13.79□□□□□ -0.2
CLN8-211ENST00000636934 RPL32P62910 135 aaKnown RBP13.79□□□□□ -0.2
CLN8-211ENST00000636934 MPV17L2Q567V2 206 aa13.79□□□□□ -0.2
CLN8-211ENST00000636934 SETXQ7Z333 2677 aaKnown RBP13.79□□□□□ -0.2
CLN8-211ENST00000636934 IGHV3-16A0A0C4DH30 117 aa13.78□□□□□ -0.2
CLN8-211ENST00000636934 SIVA1O15304 175 aa13.78□□□□□ -0.2
CLN8-211ENST00000636934 SPRY2O43597 315 aa13.78□□□□□ -0.2
CLN8-211ENST00000636934 IGKCP01834 107 aa13.78□□□□□ -0.2
CLN8-211ENST00000636934 OR9G4Q8NGQ1 327 aa13.78□□□□□ -0.2
CLN8-211ENST00000636934 WFDC12Q8WWY7 111 aa13.78□□□□□ -0.2
CLN8-211ENST00000636934 C9orf85Q96MD7 179 aa13.78□□□□□ -0.2
CLN8-211ENST00000636934 KIF25-AS1Q9Y6Z4 181 aa13.78□□□□□ -0.2
CLN8-211ENST00000636934 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.78□□□□□ -0.2
CLN8-211ENST00000636934 IGKV3-20P01619 116 aa13.78□□□□□ -0.2
CLN8-211ENST00000636934 BVES-AS1Q5T3Y7 98 aa13.78□□□□□ -0.2
CLN8-211ENST00000636934 BOD1L2Q8IYS8 172 aa13.78□□□□□ -0.2
CLN8-211ENST00000636934 OR11H1Q8NG94 326 aa13.78□□□□□ -0.2
CLN8-211ENST00000636934 ORAOV1Q8WV07 137 aa13.78□□□□□ -0.2
CLN8-211ENST00000636934 LINC01549A6NIU2 74 aa13.77□□□□□ -0.21
CLN8-211ENST00000636934 FGF6P10767 208 aa13.77□□□□□ -0.21
CLN8-211ENST00000636934 WFDC11Q8NEX6 87 aa13.77□□□□□ -0.21
CLN8-211ENST00000636934 RPL39LQ96EH5 51 aaKnown RBP13.77□□□□□ -0.21
CLN8-211ENST00000636934 CENPEQ02224 2701 aa13.77□□□□□ -0.21
CLN8-211ENST00000636934 TRGV11A0A075B6L2 103 aa13.76□□□□□ -0.21
CLN8-211ENST00000636934 DEFB136Q30KP8 78 aa13.76□□□□□ -0.21
CLN8-211ENST00000636934 KHDC1LQ5JSQ8 128 aa13.76□□□□□ -0.21
CLN8-211ENST00000636934 ADAMTSL5Q6ZMM2 481 aa13.76□□□□□ -0.21
CLN8-211ENST00000636934 TOMM6Q96B49 74 aa13.76□□□□□ -0.21
CLN8-211ENST00000636934 TP73-AS1Q9UF72 201 aa13.76□□□□□ -0.21
CLN8-211ENST00000636934 TRAV12-1A0A0B4J245 112 aa13.76□□□□□ -0.21
CLN8-211ENST00000636934 SPINK13Q1W4C9 94 aa13.76□□□□□ -0.21
CLN8-211ENST00000636934 C2orf91Q6ZV80 131 aa13.76□□□□□ -0.21
CLN8-211ENST00000636934 TRAV12-2A0A075B6T6 113 aa13.75□□□□□ -0.21
CLN8-211ENST00000636934 A0A087WX48 190 aa13.75□□□□□ -0.21
CLN8-211ENST00000636934 LINC00315P59091 139 aa13.75□□□□□ -0.21
CLN8-211ENST00000636934 AMTNQ6UX39 209 aa13.75□□□□□ -0.21
CLN8-211ENST00000636934 C18orf65Q6ZTR6 163 aa13.75□□□□□ -0.21
CLN8-211ENST00000636934 ABCA12Q86UK0 2595 aa13.75□□□□□ -0.21
CLN8-211ENST00000636934 PLNP26678 52 aa13.74□□□□□ -0.21
CLN8-211ENST00000636934 Q6ZSV7 163 aa13.74□□□□□ -0.21
CLN8-211ENST00000636934 KLHL30-AS1Q8NEE0 82 aa13.74□□□□□ -0.21
CLN8-211ENST00000636934 DYNLRB2Q8TF09 96 aa13.74□□□□□ -0.21
CLN8-211ENST00000636934 SCGB3A1Q96QR1 104 aa13.74□□□□□ -0.21
CLN8-211ENST00000636934 CSTL1Q9H114 145 aa13.74□□□□□ -0.21
CLN8-211ENST00000636934 COX11Q9Y6N1 276 aa13.74□□□□□ -0.21
CLN8-211ENST00000636934 ZANQ9Y493 2812 aa13.74□□□□□ -0.21
CLN8-211ENST00000636934 DNAJC9-AS1A6NH13 148 aa13.73□□□□□ -0.21
CLN8-211ENST00000636934 A8MTW9 85 aa13.73□□□□□ -0.21
CLN8-211ENST00000636934 HLA-DRB4P13762 266 aa13.73□□□□□ -0.21
CLN8-211ENST00000636934 NMUP48645 174 aa13.73□□□□□ -0.21
CLN8-211ENST00000636934 Q8N1Y9 231 aa13.73□□□□□ -0.21
CLN8-211ENST00000636934 HLA-DRB4X5D2U9 266 aa13.73□□□□□ -0.21
CLN8-211ENST00000636934 F5H697 171 aa13.73□□□□□ -0.21
CLN8-211ENST00000636934 SUMO4Q6EEV6 95 aa13.73□□□□□ -0.21
CLN8-211ENST00000636934 HHLA3Q9XRX5 114 aa13.73□□□□□ -0.21
CLN8-211ENST00000636934 H7C1H1 209 aa13.72□□□□□ -0.21
CLN8-211ENST00000636934 J3QKU1 62 aa13.72□□□□□ -0.21
CLN8-211ENST00000636934 VCYO14598 125 aa13.72□□□□□ -0.21
CLN8-211ENST00000636934 DEFB131AP59861 70 aa13.72□□□□□ -0.21
CLN8-211ENST00000636934 SEC11AP67812 179 aa13.72□□□□□ -0.21
CLN8-211ENST00000636934 TMEM97Q5BJF2 176 aa13.72□□□□□ -0.21
CLN8-211ENST00000636934 GCN1Q92616 2671 aaKnown RBP13.72□□□□□ -0.21
CLN8-211ENST00000636934 FLNBO75369 2602 aaKnown RBP13.72□□□□□ -0.21
CLN8-211ENST00000636934 SCGB2A2Q13296 93 aa13.71□□□□□ -0.21
CLN8-211ENST00000636934 MRPL35Q9NZE8 188 aaKnown RBP13.71□□□□□ -0.21
CLN8-211ENST00000636934 MDFICQ9P1T7 246 aa13.71□□□□□ -0.21
CLN8-211ENST00000636934 DOPEY2Q9Y3R5 2298 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms