RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-231	ENST00000636816	IGHV4-4	A0A075B6R2	117 aa		11.72	□□□□□ -0.53
CACNA1A-231	ENST00000636816		M0R381	172 aa		11.72	□□□□□ -0.53
CACNA1A-231	ENST00000636816	HSBP1	O75506	76 aa		11.72	□□□□□ -0.53
CACNA1A-231	ENST00000636816	HLA-DRB4	P13762	266 aa		11.72	□□□□□ -0.53
CACNA1A-231	ENST00000636816	PKIA	P61925	76 aa		11.72	□□□□□ -0.53
CACNA1A-231	ENST00000636816	SIGLEC8	Q9NYZ4	499 aa		11.72	□□□□□ -0.53
CACNA1A-231	ENST00000636816	HLA-DRB4	X5D2U9	266 aa		11.72	□□□□□ -0.53
CACNA1A-231	ENST00000636816	LOC389332	A0A1B0GUA5	103 aa		11.72	□□□□□ -0.53
CACNA1A-231	ENST00000636816	OR4C46	A6NHA9	309 aa		11.72	□□□□□ -0.53
CACNA1A-231	ENST00000636816	LINC00614	P0C842	121 aa		11.72	□□□□□ -0.53
CACNA1A-231	ENST00000636816	CKS2	P33552	79 aa		11.72	□□□□□ -0.53
CACNA1A-231	ENST00000636816	ORMDL3	Q8N138	153 aa		11.72	□□□□□ -0.53
CACNA1A-231	ENST00000636816	SCRT2	Q9NQ03	307 aa		11.72	□□□□□ -0.53
CACNA1A-231	ENST00000636816	SAP30	O75446	220 aa		11.71	□□□□□ -0.53
CACNA1A-231	ENST00000636816	CD7	P09564	240 aa		11.71	□□□□□ -0.53
CACNA1A-231	ENST00000636816	RBMY1A1	P0DJD3	496 aa	Known RBP	11.71	□□□□□ -0.53
CACNA1A-231	ENST00000636816	RBMY1C	P0DJD4	496 aa		11.71	□□□□□ -0.53
CACNA1A-231	ENST00000636816	GATA1	P15976	413 aa	Predicted RBP	11.71	□□□□□ -0.53
CACNA1A-231	ENST00000636816	TSPO	P30536	169 aa		11.71	□□□□□ -0.53
CACNA1A-231	ENST00000636816	CACNG7	P62955	275 aa		11.71	□□□□□ -0.53
CACNA1A-231	ENST00000636816	RBMY1F	Q15415	496 aa	Known RBP	11.71	□□□□□ -0.53
CACNA1A-231	ENST00000636816	ODF3L2	Q3SX64	289 aa		11.71	□□□□□ -0.53
CACNA1A-231	ENST00000636816	F8	P00451	2351 aa		11.71	□□□□□ -0.53
CACNA1A-231	ENST00000636816	TRAV25	A0A0B4J276	109 aa		11.7	□□□□□ -0.54
CACNA1A-231	ENST00000636816	CRX	O43186	299 aa	Predicted RBP	11.7	□□□□□ -0.54
CACNA1A-231	ENST00000636816	NPY	P01303	97 aa		11.7	□□□□□ -0.54
CACNA1A-231	ENST00000636816	PHLDA3	Q9Y5J5	127 aa		11.7	□□□□□ -0.54
CACNA1A-231	ENST00000636816		A8MTW9	85 aa		11.7	□□□□□ -0.54
CACNA1A-231	ENST00000636816	SCGB1D1	O95968	90 aa		11.7	□□□□□ -0.54
CACNA1A-231	ENST00000636816	IFI27	P40305	119 aa	Predicted RBP	11.7	□□□□□ -0.54
CACNA1A-231	ENST00000636816	NDUFA11	Q86Y39	141 aa		11.69	□□□□□ -0.54
CACNA1A-231	ENST00000636816	CHCHD1	Q96BP2	118 aa	Known RBP	11.69	□□□□□ -0.54
CACNA1A-231	ENST00000636816	MDFIC	Q9P1T7	246 aa		11.69	□□□□□ -0.54
CACNA1A-231	ENST00000636816	TRAV26-2	A0A0B4J265	109 aa		11.68	□□□□□ -0.54
CACNA1A-231	ENST00000636816	TSTD3	H0UI37	97 aa		11.68	□□□□□ -0.54
CACNA1A-231	ENST00000636816	MED14OS	P0DP75	135 aa		11.68	□□□□□ -0.54
CACNA1A-231	ENST00000636816	KRTDAP	P60985	99 aa		11.68	□□□□□ -0.54
CACNA1A-231	ENST00000636816	TDRG1	Q3Y452	100 aa		11.68	□□□□□ -0.54
CACNA1A-231	ENST00000636816	PRSS3P2	Q8NHM4	247 aa		11.68	□□□□□ -0.54
CACNA1A-231	ENST00000636816	IGHV1-24	A0A0C4DH33	117 aa		11.68	□□□□□ -0.54
CACNA1A-231	ENST00000636816	PRM2	P04554	102 aa		11.68	□□□□□ -0.54
CACNA1A-231	ENST00000636816		Q8N1Y9	231 aa		11.68	□□□□□ -0.54
CACNA1A-231	ENST00000636816	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	11.68	□□□□□ -0.54
CACNA1A-231	ENST00000636816	IGHV1OR15-1	A0A075B7D0	117 aa		11.67	□□□□□ -0.54
CACNA1A-231	ENST00000636816	IGHV3-16	A0A0C4DH30	117 aa		11.67	□□□□□ -0.54
CACNA1A-231	ENST00000636816	SMIM15	Q7Z3B0	74 aa		11.67	□□□□□ -0.54
CACNA1A-231	ENST00000636816	C14orf178	Q8N769	122 aa	Predicted RBP	11.67	□□□□□ -0.54
CACNA1A-231	ENST00000636816	IGLV1-51	P01701	117 aa		11.67	□□□□□ -0.54
CACNA1A-231	ENST00000636816	LINC00173	Q6ZV60	143 aa		11.67	□□□□□ -0.54
CACNA1A-231	ENST00000636816	CYSRT1	A8MQ03	144 aa		11.66	□□□□□ -0.54
CACNA1A-231	ENST00000636816	C3orf79	P0CE67	100 aa		11.66	□□□□□ -0.54
CACNA1A-231	ENST00000636816	ZNF664	Q8N3J9	261 aa		11.66	□□□□□ -0.54
CACNA1A-231	ENST00000636816		Q8N976	141 aa		11.66	□□□□□ -0.54
CACNA1A-231	ENST00000636816	JPT2	Q9H910	190 aa		11.66	□□□□□ -0.54
CACNA1A-231	ENST00000636816	TNFRSF6B	O95407	300 aa		11.65	□□□□□ -0.54
CACNA1A-231	ENST00000636816	HTN1	P15515	57 aa		11.65	□□□□□ -0.54
CACNA1A-231	ENST00000636816	DDT	P30046	118 aa		11.65	□□□□□ -0.54
CACNA1A-231	ENST00000636816	FA2H	Q7L5A8	372 aa		11.65	□□□□□ -0.54
CACNA1A-231	ENST00000636816	SPATA3	Q8NHX4	192 aa		11.65	□□□□□ -0.54
CACNA1A-231	ENST00000636816	TENM1	Q9UKZ4	2725 aa		11.65	□□□□□ -0.54
CACNA1A-231	ENST00000636816	PPBP	P02775	128 aa		11.65	□□□□□ -0.55
CACNA1A-231	ENST00000636816	DEFA6	Q01524	100 aa		11.65	□□□□□ -0.55
CACNA1A-231	ENST00000636816	AP5S1	Q9NUS5	200 aa		11.65	□□□□□ -0.55
CACNA1A-231	ENST00000636816	JMJD1C	Q15652	2540 aa		11.64	□□□□□ -0.55
CACNA1A-231	ENST00000636816	OR11H12	B2RN74	326 aa		11.64	□□□□□ -0.55
CACNA1A-231	ENST00000636816	NXPH4	O95158	308 aa		11.64	□□□□□ -0.55
CACNA1A-231	ENST00000636816	PF4	P02776	101 aa		11.64	□□□□□ -0.55
CACNA1A-231	ENST00000636816	LINC00482	Q8N8I6	264 aa		11.64	□□□□□ -0.55
CACNA1A-231	ENST00000636816	C9orf85	Q96MD7	179 aa		11.64	□□□□□ -0.55
CACNA1A-231	ENST00000636816	NRAC	Q8N912	160 aa		11.63	□□□□□ -0.55
CACNA1A-231	ENST00000636816	WFDC10A	Q9H1F0	79 aa		11.63	□□□□□ -0.55
CACNA1A-231	ENST00000636816	PRO1933	Q9H354	126 aa		11.63	□□□□□ -0.55
CACNA1A-231	ENST00000636816	CBY3	A6NI87	242 aa		11.63	□□□□□ -0.55
CACNA1A-231	ENST00000636816	OR2K2	Q8NGT1	345 aa		11.63	□□□□□ -0.55
CACNA1A-231	ENST00000636816	DPH3P1	Q9H4G8	78 aa		11.63	□□□□□ -0.55
CACNA1A-231	ENST00000636816		A0A096LNJ9	63 aa		11.62	□□□□□ -0.55
CACNA1A-231	ENST00000636816	MGP	P08493	103 aa		11.62	□□□□□ -0.55
CACNA1A-231	ENST00000636816	SPATA12	Q7Z6I5	190 aa		11.62	□□□□□ -0.55
CACNA1A-231	ENST00000636816	LURAP1L	Q8IV03	231 aa		11.62	□□□□□ -0.55
CACNA1A-231	ENST00000636816	STH	Q8IWL8	128 aa		11.62	□□□□□ -0.55
CACNA1A-231	ENST00000636816	C14orf144	Q96I85	54 aa		11.62	□□□□□ -0.55
CACNA1A-231	ENST00000636816	MAP1LC3A	Q9H492	121 aa		11.62	□□□□□ -0.55
CACNA1A-231	ENST00000636816	KIF25-AS1	Q9Y6Z4	181 aa		11.62	□□□□□ -0.55
CACNA1A-231	ENST00000636816	LINC00315	P59091	139 aa		11.61	□□□□□ -0.55
CACNA1A-231	ENST00000636816	XCL2	Q9UBD3	114 aa		11.61	□□□□□ -0.55
CACNA1A-231	ENST00000636816	BAHCC1	Q9P281	2608 aa		11.61	□□□□□ -0.55
CACNA1A-231	ENST00000636816	LEPROTL1	O95214	131 aa		11.61	□□□□□ -0.55
CACNA1A-231	ENST00000636816	BEAN1	Q3B7T3	259 aa		11.61	□□□□□ -0.55
CACNA1A-231	ENST00000636816	TRPT1	Q86TN4	253 aa	Known RBP	11.61	□□□□□ -0.55
CACNA1A-231	ENST00000636816	VWF	P04275	2813 aa		11.6	□□□□□ -0.55
CACNA1A-231	ENST00000636816		A0A087WWL8	130 aa		11.6	□□□□□ -0.55
CACNA1A-231	ENST00000636816	AP1S3	Q96PC3	154 aa		11.6	□□□□□ -0.55
CACNA1A-231	ENST00000636816	C19orf73	Q9NVV2	129 aa		11.6	□□□□□ -0.55
CACNA1A-231	ENST00000636816	LAMTOR2	Q9Y2Q5	125 aa		11.6	□□□□□ -0.55
CACNA1A-231	ENST00000636816	CFAP161	Q6P656	301 aa		11.59	□□□□□ -0.55
CACNA1A-231	ENST00000636816	RASL10A	Q92737	203 aa		11.59	□□□□□ -0.55
CACNA1A-231	ENST00000636816	RPL39L	Q96EH5	51 aa	Known RBP	11.59	□□□□□ -0.55
CACNA1A-231	ENST00000636816	MRAP2	Q96G30	205 aa		11.59	□□□□□ -0.55
CACNA1A-231	ENST00000636816	CLUHP3	Q96NS8	147 aa		11.59	□□□□□ -0.55
CACNA1A-231	ENST00000636816	ATR	Q13535	2644 aa		11.59	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms