RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 FAM74A7A6NL05 159 aa12.92□□□□□ -0.34
CLN6-213ENST00000636212 C1QBP02746 253 aa12.92□□□□□ -0.34
CLN6-213ENST00000636212 ASIPP42127 132 aa12.92□□□□□ -0.34
CLN6-213ENST00000636212 UBE2G1P62253 170 aa12.92□□□□□ -0.34
CLN6-213ENST00000636212 WFDC10BQ8IUB3 73 aa12.92□□□□□ -0.34
CLN6-213ENST00000636212 LINC00479Q96M42 142 aa12.92□□□□□ -0.34
CLN6-213ENST00000636212 LOC100131303A0A0U1RQF7 123 aa12.91□□□□□ -0.34
CLN6-213ENST00000636212 MGST1P10620 155 aaKnown RBP12.91□□□□□ -0.34
CLN6-213ENST00000636212 TIRAPP58753 221 aa12.91□□□□□ -0.34
CLN6-213ENST00000636212 ZNF506Q5JVG8 444 aa12.91□□□□□ -0.34
CLN6-213ENST00000636212 Q86TA4 180 aa12.91□□□□□ -0.34
CLN6-213ENST00000636212 SLC25A29Q8N8R3 303 aa12.91□□□□□ -0.34
CLN6-213ENST00000636212 MSRB1Q9NZV6 116 aa12.91□□□□□ -0.34
CLN6-213ENST00000636212 TRAV8-6A0A0B4J262 113 aa12.9□□□□□ -0.34
CLN6-213ENST00000636212 PGPEP1LA6NFU8 196 aa12.9□□□□□ -0.34
CLN6-213ENST00000636212 PFDN1O60925 122 aa12.9□□□□□ -0.34
CLN6-213ENST00000636212 DNAH10OSP0CZ25 163 aa12.9□□□□□ -0.34
CLN6-213ENST00000636212 EIF5AP63241 154 aaKnown RBP12.9□□□□□ -0.34
CLN6-213ENST00000636212 Q6ZRN7 208 aaPredicted RBP12.9□□□□□ -0.34
CLN6-213ENST00000636212 FMC1Q96HJ9 113 aa12.9□□□□□ -0.34
CLN6-213ENST00000636212 TCEAL7Q9BRU2 100 aa12.9□□□□□ -0.34
CLN6-213ENST00000636212 ZNF471Q9BX82 626 aaPredicted RBP12.9□□□□□ -0.34
CLN6-213ENST00000636212 ZFP30Q9Y2G7 519 aa12.9□□□□□ -0.34
CLN6-213ENST00000636212 DNAH11Q96DT5 4516 aa12.9□□□□□ -0.34
CLN6-213ENST00000636212 IGHV3-73A0A0B4J1V6 119 aa12.89□□□□□ -0.35
CLN6-213ENST00000636212 A8MWV9 139 aa12.89□□□□□ -0.35
CLN6-213ENST00000636212 B4DEV8 164 aa12.89□□□□□ -0.35
CLN6-213ENST00000636212 CRYGDP07320 174 aa12.89□□□□□ -0.35
CLN6-213ENST00000636212 RNASE3P12724 160 aaKnown RBP12.89□□□□□ -0.35
CLN6-213ENST00000636212 LGALSLQ3ZCW2 172 aaPredicted RBP12.89□□□□□ -0.35
CLN6-213ENST00000636212 CST9LP1Q5W188 147 aa12.89□□□□□ -0.35
CLN6-213ENST00000636212 PGPEP1Q9NXJ5 209 aa12.89□□□□□ -0.35
CLN6-213ENST00000636212 IGHV3-38A0A0C4DH36 116 aa12.88□□□□□ -0.35
CLN6-213ENST00000636212 FHITP49789 147 aa12.88□□□□□ -0.35
CLN6-213ENST00000636212 KRTAP10-2P60368 255 aa12.88□□□□□ -0.35
CLN6-213ENST00000636212 OR10J3Q5JRS4 329 aa12.88□□□□□ -0.35
CLN6-213ENST00000636212 PIK3CD-AS1Q5SR53 167 aa12.88□□□□□ -0.35
CLN6-213ENST00000636212 DPPA3Q6W0C5 159 aa12.88□□□□□ -0.35
CLN6-213ENST00000636212 TMUB2Q71RG4 321 aa12.88□□□□□ -0.35
CLN6-213ENST00000636212 SYT8Q8NBV8 401 aa12.88□□□□□ -0.35
CLN6-213ENST00000636212 TNFRSF18Q9Y5U5 241 aa12.88□□□□□ -0.35
CLN6-213ENST00000636212 PCLOQ9Y6V0 5065 aa12.87□□□□□ -0.35
CLN6-213ENST00000636212 IGKV3D-20A0A0C4DH25 116 aa12.87□□□□□ -0.35
CLN6-213ENST00000636212 DYNC1H1Q14204 4646 aaKnown RBP12.87□□□□□ -0.35
CLN6-213ENST00000636212 A0A1B0GVG6 124 aa12.86□□□□□ -0.35
CLN6-213ENST00000636212 UMAD1C9J7I0 102 aa12.86□□□□□ -0.35
CLN6-213ENST00000636212 SEC11BP0C7V7 166 aa12.86□□□□□ -0.35
CLN6-213ENST00000636212 TPT1P13693 172 aaKnown RBP12.86□□□□□ -0.35
CLN6-213ENST00000636212 AKR1C3P42330 323 aa12.86□□□□□ -0.35
CLN6-213ENST00000636212 FAM162BQ5T6X4 162 aa12.86□□□□□ -0.35
CLN6-213ENST00000636212 ZFP2Q6ZN57 461 aa12.86□□□□□ -0.35
CLN6-213ENST00000636212 MAPKAPK5-AS1Q8N8E1 139 aa12.86□□□□□ -0.35
CLN6-213ENST00000636212 ATP6V0E2Q8NHE4 81 aa12.86□□□□□ -0.35
CLN6-213ENST00000636212 IL36BQ9NZH7 164 aa12.86□□□□□ -0.35
CLN6-213ENST00000636212 CDPF1Q6NVV7 123 aa12.85□□□□□ -0.35
CLN6-213ENST00000636212 SFT2D1Q8WV19 159 aa12.85□□□□□ -0.35
CLN6-213ENST00000636212 ZC2HC1AQ96GY0 325 aa12.85□□□□□ -0.35
CLN6-213ENST00000636212 PARLQ9H300 379 aa12.85□□□□□ -0.35
CLN6-213ENST00000636212 M0R036 132 aa12.84□□□□□ -0.35
CLN6-213ENST00000636212 PSCAO43653 123 aa12.84□□□□□ -0.35
CLN6-213ENST00000636212 LINC01556Q5JQF7 62 aa12.84□□□□□ -0.35
CLN6-213ENST00000636212 LELP1Q5T871 98 aa12.84□□□□□ -0.35
CLN6-213ENST00000636212 FAM213BQ8TBF2 198 aa12.84□□□□□ -0.35
CLN6-213ENST00000636212 GTSF1LQ9H1H1 148 aa12.84□□□□□ -0.35
CLN6-213ENST00000636212 TRBV6-1A0A0K0K1D8 114 aa12.83□□□□□ -0.36
CLN6-213ENST00000636212 KRBOX1C9JBD0 128 aa12.83□□□□□ -0.36
CLN6-213ENST00000636212 H3BVH4 76 aa12.83□□□□□ -0.36
CLN6-213ENST00000636212 RHODO00212 210 aa12.83□□□□□ -0.36
CLN6-213ENST00000636212 SH2D1AO60880 128 aa12.83□□□□□ -0.36
CLN6-213ENST00000636212 S100A9P06702 114 aaKnown RBP12.83□□□□□ -0.36
CLN6-213ENST00000636212 COX8CQ7Z4L0 72 aa12.83□□□□□ -0.36
CLN6-213ENST00000636212 PAGE4O60829 102 aa12.82□□□□□ -0.36
CLN6-213ENST00000636212 ARMS2P0C7Q2 107 aa12.82□□□□□ -0.36
CLN6-213ENST00000636212 DNLZQ5SXM8 178 aa12.82□□□□□ -0.36
CLN6-213ENST00000636212 C9orf62Q8N4C0 152 aa12.82□□□□□ -0.36
CLN6-213ENST00000636212 PHLDA3Q9Y5J5 127 aa12.82□□□□□ -0.36
CLN6-213ENST00000636212 A0A087WTM6 91 aa12.81□□□□□ -0.36
CLN6-213ENST00000636212 GRIFINA4D1Z8 144 aa12.81□□□□□ -0.36
CLN6-213ENST00000636212 LTAP01374 205 aa12.81□□□□□ -0.36
CLN6-213ENST00000636212 CRIP1P50238 77 aa12.81□□□□□ -0.36
CLN6-213ENST00000636212 ZNF674Q2M3X9 581 aa12.81□□□□□ -0.36
CLN6-213ENST00000636212 EIF5AL1Q6IS14 154 aaKnown RBP12.81□□□□□ -0.36
CLN6-213ENST00000636212 MBD3L1Q8WWY6 194 aa12.81□□□□□ -0.36
CLN6-213ENST00000636212 GAGE12JA6NER3 117 aa12.8□□□□□ -0.36
CLN6-213ENST00000636212 GAGE1Q13065 139 aa12.8□□□□□ -0.36
CLN6-213ENST00000636212 GAGE4Q13068 117 aa12.8□□□□□ -0.36
CLN6-213ENST00000636212 GAGE5Q13069 117 aa12.8□□□□□ -0.36
CLN6-213ENST00000636212 LINC01559Q495D7 138 aa12.8□□□□□ -0.36
CLN6-213ENST00000636212 GAGE13Q4V321 117 aa12.8□□□□□ -0.36
CLN6-213ENST00000636212 SLC51BQ86UW2 128 aa12.8□□□□□ -0.36
CLN6-213ENST00000636212 TMSB15BA0A087X1C1 80 aa12.79□□□□□ -0.36
CLN6-213ENST00000636212 A0A1B0GV50 99 aa12.79□□□□□ -0.36
CLN6-213ENST00000636212 IBA57-AS1B1ANH7 110 aa12.79□□□□□ -0.36
CLN6-213ENST00000636212 IGHV3-30P01768 117 aa12.79□□□□□ -0.36
CLN6-213ENST00000636212 IGHV3-33P01772 117 aa12.79□□□□□ -0.36
CLN6-213ENST00000636212 H2AFB1P0C5Y9 115 aa12.79□□□□□ -0.36
CLN6-213ENST00000636212 IGHV3-30-3P0DP02 117 aa12.79□□□□□ -0.36
CLN6-213ENST00000636212 IGHV3-30-5P0DP03 117 aa12.79□□□□□ -0.36
CLN6-213ENST00000636212 FAM74A4Q5TZK3 123 aa12.79□□□□□ -0.36
CLN6-213ENST00000636212 DMRTA1Q5VZB9 504 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 560.5 ms