RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 ERVFC1-1P60608 527 aa6.01□□□□□ -1.45
CDKL5-209ENST00000635828 IBA57Q5T440 356 aaKnown RBP6.01□□□□□ -1.45
CDKL5-209ENST00000635828 ISOC2Q96AB3 205 aa6.01□□□□□ -1.45
CDKL5-209ENST00000635828 SPINK4O60575 86 aa6.01□□□□□ -1.45
CDKL5-209ENST00000635828 TAGLN2P37802 199 aaKnown RBP6.01□□□□□ -1.45
CDKL5-209ENST00000635828 TMEM241Q24JQ0 296 aa6.01□□□□□ -1.45
CDKL5-209ENST00000635828 Q6ZSN1 163 aa6.01□□□□□ -1.45
CDKL5-209ENST00000635828 WWC2-AS2Q96NR7 200 aa6.01□□□□□ -1.45
CDKL5-209ENST00000635828 A0A0J9YY99 117 aa6□□□□□ -1.45
CDKL5-209ENST00000635828 TMEM218A2RU14 115 aa6□□□□□ -1.45
CDKL5-209ENST00000635828 TMEM189A5PLL7 270 aa6□□□□□ -1.45
CDKL5-209ENST00000635828 SPART-AS1P0CW21 52 aa6□□□□□ -1.45
CDKL5-209ENST00000635828 ZNF876PQ49A33 203 aa6□□□□□ -1.45
CDKL5-209ENST00000635828 PHLDA1Q8WV24 401 aaPredicted RBP6□□□□□ -1.45
CDKL5-209ENST00000635828 C9orf85Q96MD7 179 aa6□□□□□ -1.45
CDKL5-209ENST00000635828 A0A087WWL8 130 aa6□□□□□ -1.45
CDKL5-209ENST00000635828 P01737 135 aa6□□□□□ -1.45
CDKL5-209ENST00000635828 S100A4P26447 101 aaKnown RBP6□□□□□ -1.45
CDKL5-209ENST00000635828 DAD1P61803 113 aa6□□□□□ -1.45
CDKL5-209ENST00000635828 S100A9P06702 114 aaKnown RBP6□□□□□ -1.45
CDKL5-209ENST00000635828 CASC10Q5T4H9 136 aa6□□□□□ -1.45
CDKL5-209ENST00000635828 MUC7Q8TAX7 377 aa6□□□□□ -1.45
CDKL5-209ENST00000635828 LINC00467Q9BRT7 94 aa6□□□□□ -1.45
CDKL5-209ENST00000635828 V9GYV3 84 aa6□□□□□ -1.45
CDKL5-209ENST00000635828 LOC100131303A0A0U1RQF7 123 aa5.99□□□□□ -1.45
CDKL5-209ENST00000635828 DAZ2Q13117 558 aaKnown RBP5.99□□□□□ -1.45
CDKL5-209ENST00000635828 TRGV2A0A075B6R0 118 aa5.99□□□□□ -1.45
CDKL5-209ENST00000635828 FBLL1A6NHQ2 334 aaKnown RBP5.99□□□□□ -1.45
CDKL5-209ENST00000635828 F8W036 122 aa5.99□□□□□ -1.45
CDKL5-209ENST00000635828 ZNF415Q09FC8 603 aa5.99□□□□□ -1.45
CDKL5-209ENST00000635828 DEFB104AQ8WTQ1 72 aa5.99□□□□□ -1.45
CDKL5-209ENST00000635828 SFRP2Q96HF1 295 aa5.99□□□□□ -1.45
CDKL5-209ENST00000635828 IGLL5B9A064 214 aa5.99□□□□□ -1.45
CDKL5-209ENST00000635828 ASIPP42127 132 aa5.99□□□□□ -1.45
CDKL5-209ENST00000635828 LYZL1Q6UWQ5 148 aa5.99□□□□□ -1.45
CDKL5-209ENST00000635828 DAZAP1Q96EP5 407 aaKnown RBP5.99□□□□□ -1.45
CDKL5-209ENST00000635828 NAT8Q9UHE5 227 aa5.99□□□□□ -1.45
CDKL5-209ENST00000635828 DEFB131BA0A096LNP1 70 aa5.98□□□□□ -1.45
CDKL5-209ENST00000635828 A0A096LPF7 62 aa5.98□□□□□ -1.45
CDKL5-209ENST00000635828 P0DMU3 169 aa5.98□□□□□ -1.45
CDKL5-209ENST00000635828 FAM231AP0DMU4 169 aa5.98□□□□□ -1.45
CDKL5-209ENST00000635828 FAM231CP0DMU5 169 aa5.98□□□□□ -1.45
CDKL5-209ENST00000635828 RPP21Q9H633 154 aaKnown RBP5.98□□□□□ -1.45
CDKL5-209ENST00000635828 TRGV11A0A075B6L2 103 aa5.98□□□□□ -1.45
CDKL5-209ENST00000635828 F5H768 121 aa5.98□□□□□ -1.45
CDKL5-209ENST00000635828 FAM74A4Q5TZK3 123 aa5.98□□□□□ -1.45
CDKL5-209ENST00000635828 ZNF493Q6ZR52 646 aa5.98□□□□□ -1.45
CDKL5-209ENST00000635828 LINC00612Q8N6U2 182 aa5.98□□□□□ -1.45
CDKL5-209ENST00000635828 KCNS1Q96KK3 526 aa5.98□□□□□ -1.45
CDKL5-209ENST00000635828 PGLYRP4Q96LB8 373 aa5.98□□□□□ -1.45
CDKL5-209ENST00000635828 SCRT2Q9NQ03 307 aa5.98□□□□□ -1.45
CDKL5-209ENST00000635828 IL36BQ9NZH7 164 aa5.98□□□□□ -1.45
CDKL5-209ENST00000635828 IGLC6P0CF74 106 aa5.98□□□□□ -1.45
CDKL5-209ENST00000635828 RASL10AQ92737 203 aa5.98□□□□□ -1.45
CDKL5-209ENST00000635828 M0R2P5 195 aa5.97□□□□□ -1.45
CDKL5-209ENST00000635828 RNF212Q495C1 297 aa5.97□□□□□ -1.45
CDKL5-209ENST00000635828 CFAP126Q5VTH2 177 aa5.97□□□□□ -1.45
CDKL5-209ENST00000635828 TRAV26-1A0A087WT03 109 aa5.97□□□□□ -1.45
CDKL5-209ENST00000635828 GAS8-AS1O95177 125 aa5.97□□□□□ -1.45
CDKL5-209ENST00000635828 CFAP161Q6P656 301 aa5.97□□□□□ -1.45
CDKL5-209ENST00000635828 TMEM88Q6PEY1 159 aa5.97□□□□□ -1.45
CDKL5-209ENST00000635828 ATRAIDQ6UW56 229 aa5.97□□□□□ -1.45
CDKL5-209ENST00000635828 PHLDA3Q9Y5J5 127 aa5.97□□□□□ -1.45
CDKL5-209ENST00000635828 LYRM9A8MSI8 78 aa5.97□□□□□ -1.45
CDKL5-209ENST00000635828 NTF3P20783 257 aa5.97□□□□□ -1.45
CDKL5-209ENST00000635828 EVI2AP22794 236 aa5.97□□□□□ -1.45
CDKL5-209ENST00000635828 FAM3BP58499 235 aaPredicted RBP5.97□□□□□ -1.45
CDKL5-209ENST00000635828 C14orf178Q8N769 122 aaPredicted RBP5.97□□□□□ -1.45
CDKL5-209ENST00000635828 VSIG2Q96IQ7 327 aa5.97□□□□□ -1.45
CDKL5-209ENST00000635828 HIGD1CA8MV81 97 aa5.96□□□□□ -1.45
CDKL5-209ENST00000635828 GATCO43716 136 aaKnown RBP5.96□□□□□ -1.45
CDKL5-209ENST00000635828 FHL2Q14192 279 aa5.96□□□□□ -1.45
CDKL5-209ENST00000635828 FER1L6-AS1Q8NA97 138 aa5.96□□□□□ -1.45
CDKL5-209ENST00000635828 SMIM12Q96EX1 92 aa5.96□□□□□ -1.45
CDKL5-209ENST00000635828 SSBP4Q9BWG4 385 aaPredicted RBP5.96□□□□□ -1.45
CDKL5-209ENST00000635828 SMDT1Q9H4I9 107 aa5.96□□□□□ -1.46
CDKL5-209ENST00000635828 TRAV26-2A0A0B4J265 109 aa5.95□□□□□ -1.46
CDKL5-209ENST00000635828 SNAI2O43623 268 aa5.95□□□□□ -1.46
CDKL5-209ENST00000635828 CRYGDP07320 174 aa5.95□□□□□ -1.46
CDKL5-209ENST00000635828 UQCC3Q6UW78 93 aa5.95□□□□□ -1.46
CDKL5-209ENST00000635828 IGHV4-4A0A075B6R2 117 aa5.95□□□□□ -1.46
CDKL5-209ENST00000635828 APOC3P02656 99 aa5.95□□□□□ -1.46
CDKL5-209ENST00000635828 FAM74A3Q4VXF1 159 aa5.95□□□□□ -1.46
CDKL5-209ENST00000635828 SPANXN1Q5VSR9 72 aa5.95□□□□□ -1.46
CDKL5-209ENST00000635828 UFSP1Q6NVU6 142 aa5.95□□□□□ -1.46
CDKL5-209ENST00000635828 CEMP1Q6PRD7 247 aaPredicted RBP5.95□□□□□ -1.46
CDKL5-209ENST00000635828 FAM231DQ6ZW35 169 aa5.95□□□□□ -1.46
CDKL5-209ENST00000635828 NUP35Q8NFH5 326 aa5.95□□□□□ -1.46
CDKL5-209ENST00000635828 OR10G8Q8NGN5 311 aa5.95□□□□□ -1.46
CDKL5-209ENST00000635828 LY96Q9Y6Y9 160 aa5.95□□□□□ -1.46
CDKL5-209ENST00000635828 OR4C5Q8NGB2 326 aa5.95□□□□□ -1.46
CDKL5-209ENST00000635828 ATP5G1P05496 136 aa5.94□□□□□ -1.46
CDKL5-209ENST00000635828 C10orf91Q5T1B1 145 aa5.94□□□□□ -1.46
CDKL5-209ENST00000635828 SLC25A29Q8N8R3 303 aa5.94□□□□□ -1.46
CDKL5-209ENST00000635828 SEC11CQ9BY50 192 aa5.94□□□□□ -1.46
CDKL5-209ENST00000635828 LGALS9BQ3B8N2 356 aa5.94□□□□□ -1.46
CDKL5-209ENST00000635828 DNLZQ5SXM8 178 aa5.94□□□□□ -1.46
CDKL5-209ENST00000635828 OSTCQ9NRP0 149 aa5.94□□□□□ -1.46
CDKL5-209ENST00000635828 URGCP-MRPS24S4R325 110 aa5.94□□□□□ -1.46
CDKL5-209ENST00000635828 ALMS1Q8TCU4 4167 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms