RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 COX6CP09669 75 aa3.45□□□□□ -1.86
SCN1A-210ENST00000635776 Q8N2B8 174 aa3.45□□□□□ -1.86
SCN1A-210ENST00000635776 LCNL1Q6ZST4 164 aa3.45□□□□□ -1.86
SCN1A-210ENST00000635776 SMKR1H3BMG3 65 aa3.45□□□□□ -1.86
SCN1A-210ENST00000635776 RNF185Q96GF1 192 aa3.45□□□□□ -1.86
SCN1A-210ENST00000635776 CHAC1Q9BUX1 264 aa3.45□□□□□ -1.86
SCN1A-210ENST00000635776 ZNF843Q8N446 348 aa3.44□□□□□ -1.86
SCN1A-210ENST00000635776 Q8N976 141 aa3.44□□□□□ -1.86
SCN1A-210ENST00000635776 TMEM101Q96IK0 257 aa3.44□□□□□ -1.86
SCN1A-210ENST00000635776 SPANXA1Q9NS26 97 aa3.44□□□□□ -1.86
SCN1A-210ENST00000635776 BVES-AS1Q5T3Y7 98 aa3.44□□□□□ -1.86
SCN1A-210ENST00000635776 TMEM170BQ5T4T1 132 aa3.44□□□□□ -1.86
SCN1A-210ENST00000635776 LINC00467Q9BRT7 94 aa3.44□□□□□ -1.86
SCN1A-210ENST00000635776 MCRIP2Q9BUT9 160 aaKnown RBP3.44□□□□□ -1.86
SCN1A-210ENST00000635776 GEMIN7Q9H840 131 aaKnown RBP3.44□□□□□ -1.86
SCN1A-210ENST00000635776 MSRB1Q9NZV6 116 aa3.44□□□□□ -1.86
SCN1A-210ENST00000635776 PF4P02776 101 aa3.44□□□□□ -1.86
SCN1A-210ENST00000635776 SRD5A1P18405 259 aa3.44□□□□□ -1.86
SCN1A-210ENST00000635776 URB1-AS1Q96HZ7 61 aa3.44□□□□□ -1.86
SCN1A-210ENST00000635776 ZNF702PQ9H963 129 aa3.44□□□□□ -1.86
SCN1A-210ENST00000635776 PCNTO95613 3336 aa3.44□□□□□ -1.86
SCN1A-210ENST00000635776 MRPL35Q9NZE8 188 aaKnown RBP3.44□□□□□ -1.86
SCN1A-210ENST00000635776 Q6ZVH6 145 aa3.44□□□□□ -1.86
SCN1A-210ENST00000635776 CITED1Q99966 193 aa3.44□□□□□ -1.86
SCN1A-210ENST00000635776 TP53TG1Q9Y2A0 90 aa3.44□□□□□ -1.86
SCN1A-210ENST00000635776 ZNF815PA8K554 130 aa3.44□□□□□ -1.86
SCN1A-210ENST00000635776 RPL24P83731 157 aaKnown RBP3.44□□□□□ -1.86
SCN1A-210ENST00000635776 TRBV10-1A0A0K0K1A3 114 aa3.43□□□□□ -1.86
SCN1A-210ENST00000635776 FSHBP01225 129 aa3.43□□□□□ -1.86
SCN1A-210ENST00000635776 INSL3P51460 131 aa3.43□□□□□ -1.86
SCN1A-210ENST00000635776 ODF1Q14990 250 aa3.43□□□□□ -1.86
SCN1A-210ENST00000635776 AMMECR1LQ6DCA0 310 aa3.43□□□□□ -1.86
SCN1A-210ENST00000635776 ZFP2Q6ZN57 461 aa3.43□□□□□ -1.86
SCN1A-210ENST00000635776 ZNF256Q9Y2P7 627 aaPredicted RBP3.43□□□□□ -1.86
SCN1A-210ENST00000635776 SPCS1Q9Y6A9 102 aa3.43□□□□□ -1.86
SCN1A-210ENST00000635776 TLN1Q9Y490 2541 aaKnown RBP3.43□□□□□ -1.86
SCN1A-210ENST00000635776 RAB37Q96AX2 223 aa3.43□□□□□ -1.86
SCN1A-210ENST00000635776 C9orf118A6NHY6 69 aa3.43□□□□□ -1.86
SCN1A-210ENST00000635776 DCANP1Q8TF63 244 aa3.43□□□□□ -1.86
SCN1A-210ENST00000635776 DSCAMO60469 2012 aa3.43□□□□□ -1.86
SCN1A-210ENST00000635776 TRBV27A0A0K0K1C4 114 aa3.43□□□□□ -1.86
SCN1A-210ENST00000635776 MYMXA0A1B0GTQ4 84 aa3.43□□□□□ -1.86
SCN1A-210ENST00000635776 NSUN5P1Q3KNT7 163 aa3.43□□□□□ -1.86
SCN1A-210ENST00000635776 GTSCR1Q86UQ5 136 aa3.43□□□□□ -1.86
SCN1A-210ENST00000635776 FAM110AQ9BQ89 295 aa3.43□□□□□ -1.86
SCN1A-210ENST00000635776 UBE2L6O14933 153 aa3.43□□□□□ -1.86
SCN1A-210ENST00000635776 IGKV3-20P01619 116 aa3.43□□□□□ -1.86
SCN1A-210ENST00000635776 RIPPLY3P57055 190 aa3.43□□□□□ -1.86
SCN1A-210ENST00000635776 SPINK13Q1W4C9 94 aa3.43□□□□□ -1.86
SCN1A-210ENST00000635776 FAM19A4Q96LR4 140 aa3.43□□□□□ -1.86
SCN1A-210ENST00000635776 IGHV3-16A0A0C4DH30 117 aa3.43□□□□□ -1.86
SCN1A-210ENST00000635776 C9orf85Q96MD7 179 aa3.43□□□□□ -1.86
SCN1A-210ENST00000635776 E9PLD3 99 aa3.43□□□□□ -1.86
SCN1A-210ENST00000635776 SFTA2Q6UW10 78 aa3.43□□□□□ -1.86
SCN1A-210ENST00000635776 STPG4Q8N801 248 aa3.43□□□□□ -1.86
SCN1A-210ENST00000635776 TRBV12-3P01733 135 aa3.43□□□□□ -1.86
SCN1A-210ENST00000635776 SUMO4Q6EEV6 95 aa3.43□□□□□ -1.86
SCN1A-210ENST00000635776 EDA2RQ9HAV5 297 aa3.43□□□□□ -1.86
SCN1A-210ENST00000635776 CD28P10747 220 aa3.42□□□□□ -1.86
SCN1A-210ENST00000635776 PYGO1Q9Y3Y4 419 aa3.42□□□□□ -1.86
SCN1A-210ENST00000635776 ZNF479Q96JC4 524 aa3.42□□□□□ -1.86
SCN1A-210ENST00000635776 PRADC1Q9BSG0 188 aa3.42□□□□□ -1.86
SCN1A-210ENST00000635776 DSCAML1Q8TD84 2053 aa3.42□□□□□ -1.86
SCN1A-210ENST00000635776 C11orf86A6NJI1 115 aa3.42□□□□□ -1.86
SCN1A-210ENST00000635776 H3BMM0 161 aa3.42□□□□□ -1.86
SCN1A-210ENST00000635776 GNRH2O43555 120 aa3.42□□□□□ -1.86
SCN1A-210ENST00000635776 SAP30O75446 220 aa3.42□□□□□ -1.86
SCN1A-210ENST00000635776 HTN1P15515 57 aa3.42□□□□□ -1.86
SCN1A-210ENST00000635776 NRACQ8N912 160 aa3.42□□□□□ -1.86
SCN1A-210ENST00000635776 ZMAT4Q9H898 229 aa3.42□□□□□ -1.86
SCN1A-210ENST00000635776 DKK2Q9UBU2 259 aa3.42□□□□□ -1.86
SCN1A-210ENST00000635776 PIEZO1Q92508 2521 aa3.42□□□□□ -1.86
SCN1A-210ENST00000635776 PRSS29PA6NIE9 313 aa3.42□□□□□ -1.86
SCN1A-210ENST00000635776 F6UB75 175 aa3.42□□□□□ -1.86
SCN1A-210ENST00000635776 H3BUT2 72 aa3.42□□□□□ -1.86
SCN1A-210ENST00000635776 POM121L12Q8N7R1 296 aa3.42□□□□□ -1.86
SCN1A-210ENST00000635776 C20orf203Q8NBC4 194 aa3.42□□□□□ -1.86
SCN1A-210ENST00000635776 SCGB1C2P0DMR2 95 aa3.42□□□□□ -1.86
SCN1A-210ENST00000635776 SAMD5Q5TGI4 173 aa3.42□□□□□ -1.86
SCN1A-210ENST00000635776 TRBV20-1A0A075B6N2 111 aa3.42□□□□□ -1.86
SCN1A-210ENST00000635776 Q1RN00 199 aa3.42□□□□□ -1.86
SCN1A-210ENST00000635776 C20orf173Q96LM9 149 aa3.42□□□□□ -1.86
SCN1A-210ENST00000635776 CCL24O00175 119 aa3.42□□□□□ -1.86
SCN1A-210ENST00000635776 RNASE1P07998 156 aaKnown RBP3.42□□□□□ -1.86
SCN1A-210ENST00000635776 NDUFA7O95182 113 aa3.41□□□□□ -1.86
SCN1A-210ENST00000635776 POLR2KP53803 58 aaKnown RBP3.41□□□□□ -1.86
SCN1A-210ENST00000635776 LINC00173Q6ZV60 143 aa3.41□□□□□ -1.86
SCN1A-210ENST00000635776 NEXN-AS1Q8NBZ9 246 aa3.41□□□□□ -1.86
SCN1A-210ENST00000635776 RASL10AQ92737 203 aa3.41□□□□□ -1.86
SCN1A-210ENST00000635776 RANBP2P49792 3224 aaKnown RBP3.41□□□□□ -1.86
SCN1A-210ENST00000635776 TRGV2A0A075B6R0 118 aa3.41□□□□□ -1.86
SCN1A-210ENST00000635776 C16orf95Q9H693 158 aa3.41□□□□□ -1.86
SCN1A-210ENST00000635776 C11orf21Q9P2W6 132 aa3.41□□□□□ -1.86
SCN1A-210ENST00000635776 BRCA2P51587 3418 aa3.41□□□□□ -1.86
SCN1A-210ENST00000635776 TRBV25-1A0A075B6N4 114 aa3.41□□□□□ -1.86
SCN1A-210ENST00000635776 C16orf74Q96GX8 76 aa3.41□□□□□ -1.86
SCN1A-210ENST00000635776 MDFICQ9P1T7 246 aa3.41□□□□□ -1.86
SCN1A-210ENST00000635776 A0A087WWL8 130 aa3.41□□□□□ -1.86
SCN1A-210ENST00000635776 Q8N1Y9 231 aa3.41□□□□□ -1.86
SCN1A-210ENST00000635776 NHP2Q9NX24 153 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms