RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 RAB5CP51148 216 aa12.52□□□□□ -0.41
CLN6-210ENST00000635747 C9orf85Q96MD7 179 aa12.52□□□□□ -0.41
CLN6-210ENST00000635747 GATA1P15976 413 aaPredicted RBP12.51□□□□□ -0.41
CLN6-210ENST00000635747 S100A4P26447 101 aaKnown RBP12.51□□□□□ -0.41
CLN6-210ENST00000635747 FMC1Q96HJ9 113 aa12.51□□□□□ -0.41
CLN6-210ENST00000635747 RS1O15537 224 aa12.5□□□□□ -0.41
CLN6-210ENST00000635747 RNASE3P12724 160 aaKnown RBP12.5□□□□□ -0.41
CLN6-210ENST00000635747 UBE2G1P62253 170 aa12.5□□□□□ -0.41
CLN6-210ENST00000635747 PIK3CD-AS1Q5SR53 167 aa12.5□□□□□ -0.41
CLN6-210ENST00000635747 CFAP126Q5VTH2 177 aa12.5□□□□□ -0.41
CLN6-210ENST00000635747 CST9LP1Q5W188 147 aa12.5□□□□□ -0.41
CLN6-210ENST00000635747 Q86TA4 180 aa12.5□□□□□ -0.41
CLN6-210ENST00000635747 PRADC1Q9BSG0 188 aa12.5□□□□□ -0.41
CLN6-210ENST00000635747 BOLA1Q9Y3E2 137 aa12.5□□□□□ -0.41
CLN6-210ENST00000635747 TRBV6-4A0A1B0GX49 114 aa12.49□□□□□ -0.41
CLN6-210ENST00000635747 LINC00315P59091 139 aa12.49□□□□□ -0.41
CLN6-210ENST00000635747 COX8CQ7Z4L0 72 aa12.49□□□□□ -0.41
CLN6-210ENST00000635747 MBD3L1Q8WWY6 194 aa12.49□□□□□ -0.41
CLN6-210ENST00000635747 LY96Q9Y6Y9 160 aa12.49□□□□□ -0.41
CLN6-210ENST00000635747 TRBV6-1A0A0K0K1D8 114 aa12.48□□□□□ -0.41
CLN6-210ENST00000635747 C16orf90A8MZG2 172 aa12.48□□□□□ -0.41
CLN6-210ENST00000635747 EVI2AP22794 236 aa12.48□□□□□ -0.41
CLN6-210ENST00000635747 ASIPP42127 132 aa12.48□□□□□ -0.41
CLN6-210ENST00000635747 SULT1A2P50226 295 aa12.48□□□□□ -0.41
CLN6-210ENST00000635747 TIRAPP58753 221 aa12.48□□□□□ -0.41
CLN6-210ENST00000635747 RHOHQ15669 191 aa12.48□□□□□ -0.41
CLN6-210ENST00000635747 ZNF506Q5JVG8 444 aa12.48□□□□□ -0.41
CLN6-210ENST00000635747 NFE4Q86UQ8 179 aa12.48□□□□□ -0.41
CLN6-210ENST00000635747 NHLRC2Q8NBF2 726 aa12.48□□□□□ -0.41
CLN6-210ENST00000635747 SFT2D1Q8WV19 159 aa12.48□□□□□ -0.41
CLN6-210ENST00000635747 IGKV3D-20A0A0C4DH25 116 aa12.47□□□□□ -0.41
CLN6-210ENST00000635747 PGPEP1LA6NFU8 196 aa12.47□□□□□ -0.41
CLN6-210ENST00000635747 B4DEV8 164 aa12.47□□□□□ -0.41
CLN6-210ENST00000635747 MGST1P10620 155 aaKnown RBP12.47□□□□□ -0.41
CLN6-210ENST00000635747 FAM162BQ5T6X4 162 aa12.47□□□□□ -0.41
CLN6-210ENST00000635747 ZNF575Q86XF7 245 aa12.47□□□□□ -0.41
CLN6-210ENST00000635747 SLC25A29Q8N8R3 303 aa12.47□□□□□ -0.41
CLN6-210ENST00000635747 FAM213BQ8TBF2 198 aa12.47□□□□□ -0.41
CLN6-210ENST00000635747 IL36BQ9NZH7 164 aa12.47□□□□□ -0.41
CLN6-210ENST00000635747 A8MWV9 139 aa12.46□□□□□ -0.41
CLN6-210ENST00000635747 S100A9P06702 114 aaKnown RBP12.46□□□□□ -0.41
CLN6-210ENST00000635747 ZFP2Q6ZN57 461 aa12.46□□□□□ -0.41
CLN6-210ENST00000635747 ZC2HC1AQ96GY0 325 aa12.46□□□□□ -0.41
CLN6-210ENST00000635747 LOC100131303A0A0U1RQF7 123 aa12.45□□□□□ -0.42
CLN6-210ENST00000635747 PAGE4O60829 102 aa12.45□□□□□ -0.42
CLN6-210ENST00000635747 LTAP01374 205 aa12.45□□□□□ -0.42
CLN6-210ENST00000635747 AKR1C3P42330 323 aa12.45□□□□□ -0.42
CLN6-210ENST00000635747 DNLZQ5SXM8 178 aa12.45□□□□□ -0.42
CLN6-210ENST00000635747 TRAV1-1A0A0B4J248 108 aa12.44□□□□□ -0.42
CLN6-210ENST00000635747 KRBOX1C9JBD0 128 aa12.44□□□□□ -0.42
CLN6-210ENST00000635747 H2AFB1P0C5Y9 115 aa12.44□□□□□ -0.42
CLN6-210ENST00000635747 DNAH10OSP0CZ25 163 aa12.44□□□□□ -0.42
CLN6-210ENST00000635747 CRIP1P50238 77 aa12.44□□□□□ -0.42
CLN6-210ENST00000635747 C10orf126Q8N4M7 172 aa12.44□□□□□ -0.42
CLN6-210ENST00000635747 SYT8Q8NBV8 401 aa12.44□□□□□ -0.42
CLN6-210ENST00000635747 IGHV3-73A0A0B4J1V6 119 aa12.43□□□□□ -0.42
CLN6-210ENST00000635747 EREGO14944 169 aa12.43□□□□□ -0.42
CLN6-210ENST00000635747 SH2D1AO60880 128 aa12.43□□□□□ -0.42
CLN6-210ENST00000635747 ZNF674Q2M3X9 581 aa12.43□□□□□ -0.42
CLN6-210ENST00000635747 Q6ZRN7 208 aaPredicted RBP12.43□□□□□ -0.42
CLN6-210ENST00000635747 SPATA12Q7Z6I5 190 aa12.43□□□□□ -0.42
CLN6-210ENST00000635747 WFDC10BQ8IUB3 73 aa12.43□□□□□ -0.42
CLN6-210ENST00000635747 TRAV8-6A0A0B4J262 113 aa12.42□□□□□ -0.42
CLN6-210ENST00000635747 TEX46H3BTG2 121 aa12.42□□□□□ -0.42
CLN6-210ENST00000635747 ALKAL2Q6UX46 152 aa12.42□□□□□ -0.42
CLN6-210ENST00000635747 PARLQ9H300 379 aa12.42□□□□□ -0.42
CLN6-210ENST00000635747 IGHV3-38A0A0C4DH36 116 aa12.41□□□□□ -0.42
CLN6-210ENST00000635747 H3BVH4 76 aa12.41□□□□□ -0.42
CLN6-210ENST00000635747 M0R036 132 aa12.41□□□□□ -0.42
CLN6-210ENST00000635747 ARMS2P0C7Q2 107 aa12.41□□□□□ -0.42
CLN6-210ENST00000635747 LINC01559Q495D7 138 aa12.41□□□□□ -0.42
CLN6-210ENST00000635747 TEX261Q6UWH6 196 aa12.41□□□□□ -0.42
CLN6-210ENST00000635747 MSRB1Q9NZV6 116 aa12.41□□□□□ -0.42
CLN6-210ENST00000635747 A0A1B0GV50 99 aa12.4□□□□□ -0.42
CLN6-210ENST00000635747 RHODO00212 210 aa12.4□□□□□ -0.42
CLN6-210ENST00000635747 CRYGDP07320 174 aa12.4□□□□□ -0.42
CLN6-210ENST00000635747 ERVFC1-1P60608 527 aa12.4□□□□□ -0.42
CLN6-210ENST00000635747 BLOC1S1P78537 153 aa12.4□□□□□ -0.42
CLN6-210ENST00000635747 ATP6V0E2Q8NHE4 81 aa12.4□□□□□ -0.42
CLN6-210ENST00000635747 GTSF1LQ9H1H1 148 aa12.4□□□□□ -0.42
CLN6-210ENST00000635747 PHLDA3Q9Y5J5 127 aa12.4□□□□□ -0.42
CLN6-210ENST00000635747 CDK2AP2O75956 126 aa12.39□□□□□ -0.43
CLN6-210ENST00000635747 LINC01556Q5JQF7 62 aa12.39□□□□□ -0.43
CLN6-210ENST00000635747 OR10J3Q5JRS4 329 aa12.39□□□□□ -0.43
CLN6-210ENST00000635747 LELP1Q5T871 98 aa12.39□□□□□ -0.43
CLN6-210ENST00000635747 DMRTA1Q5VZB9 504 aa12.39□□□□□ -0.43
CLN6-210ENST00000635747 PGPEP1Q9NXJ5 209 aa12.39□□□□□ -0.43
CLN6-210ENST00000635747 LRP1BQ9NZR2 4599 aa12.38□□□□□ -0.43
CLN6-210ENST00000635747 SCO2A0A1W2PP80 73 aa12.38□□□□□ -0.43
CLN6-210ENST00000635747 GRIFINA4D1Z8 144 aa12.38□□□□□ -0.43
CLN6-210ENST00000635747 BAGE2Q86Y30 109 aa12.38□□□□□ -0.43
CLN6-210ENST00000635747 SCRT2Q9NQ03 307 aa12.38□□□□□ -0.43
CLN6-210ENST00000635747 MANBALQ9NQG1 85 aa12.38□□□□□ -0.43
CLN6-210ENST00000635747 RYR1P21817 5038 aa12.37□□□□□ -0.43
CLN6-210ENST00000635747 ZFP82Q8N141 532 aa12.37□□□□□ -0.43
CLN6-210ENST00000635747 TNFRSF18Q9Y5U5 241 aa12.37□□□□□ -0.43
CLN6-210ENST00000635747 TMSB15BA0A087X1C1 80 aa12.36□□□□□ -0.43
CLN6-210ENST00000635747 CXCL1P09341 107 aa12.36□□□□□ -0.43
CLN6-210ENST00000635747 KRTAP10-2P60368 255 aa12.36□□□□□ -0.43
CLN6-210ENST00000635747 UFSP1Q6NVU6 142 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms