RNA–Protein interactions for RNA: ENST00000629219.1

PKP4-218, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-218ENST00000629219 HERC1Q15751 4861 aa6.2□□□□□ -1.42
PKP4-218ENST00000629219 A8MWV9 139 aa6.2□□□□□ -1.42
PKP4-218ENST00000629219 CXCL1P09341 107 aa6.2□□□□□ -1.42
PKP4-218ENST00000629219 SFTA3P0C7M3 94 aa6.2□□□□□ -1.42
PKP4-218ENST00000629219 DNAH10OSP0CZ25 163 aa6.2□□□□□ -1.42
PKP4-218ENST00000629219 MGST1P10620 155 aaKnown RBP6.2□□□□□ -1.42
PKP4-218ENST00000629219 GYPEP15421 78 aa6.2□□□□□ -1.42
PKP4-218ENST00000629219 RHOHQ15669 191 aa6.2□□□□□ -1.42
PKP4-218ENST00000629219 ZNF876PQ49A33 203 aa6.2□□□□□ -1.42
PKP4-218ENST00000629219 CFAP126Q5VTH2 177 aa6.2□□□□□ -1.42
PKP4-218ENST00000629219 SGK494Q96LW2 274 aa6.2□□□□□ -1.42
PKP4-218ENST00000629219 DNAH5Q8TE73 4624 aa6.19□□□□□ -1.42
PKP4-218ENST00000629219 IGKV3D-20A0A0C4DH25 116 aa6.19□□□□□ -1.42
PKP4-218ENST00000629219 LTAP01374 205 aa6.19□□□□□ -1.42
PKP4-218ENST00000629219 TPT1P13693 172 aaKnown RBP6.19□□□□□ -1.42
PKP4-218ENST00000629219 ASIPP42127 132 aa6.19□□□□□ -1.42
PKP4-218ENST00000629219 RAB5CP51148 216 aa6.19□□□□□ -1.42
PKP4-218ENST00000629219 FGF8P55075 233 aaPredicted RBP6.19□□□□□ -1.42
PKP4-218ENST00000629219 UBE2G2P60604 165 aa6.19□□□□□ -1.42
PKP4-218ENST00000629219 ZNF674Q2M3X9 581 aa6.19□□□□□ -1.42
PKP4-218ENST00000629219 ZNF506Q5JVG8 444 aa6.19□□□□□ -1.42
PKP4-218ENST00000629219 FAM162BQ5T6X4 162 aa6.19□□□□□ -1.42
PKP4-218ENST00000629219 ZNF575Q86XF7 245 aa6.19□□□□□ -1.42
PKP4-218ENST00000629219 C10orf126Q8N4M7 172 aa6.19□□□□□ -1.42
PKP4-218ENST00000629219 OR11H4Q8NGC9 324 aa6.19□□□□□ -1.42
PKP4-218ENST00000629219 PRADC1Q9BSG0 188 aa6.19□□□□□ -1.42
PKP4-218ENST00000629219 LY96Q9Y6Y9 160 aa6.19□□□□□ -1.42
PKP4-218ENST00000629219 HSPG2P98160 4391 aa6.19□□□□□ -1.42
PKP4-218ENST00000629219 TRAV1-1A0A0B4J248 108 aa6.18□□□□□ -1.42
PKP4-218ENST00000629219 TRAV34A0A0B4J273 112 aa6.18□□□□□ -1.42
PKP4-218ENST00000629219 SMLR1H3BR10 107 aa6.18□□□□□ -1.42
PKP4-218ENST00000629219 RHODO00212 210 aa6.18□□□□□ -1.42
PKP4-218ENST00000629219 CDK2AP2O75956 126 aa6.18□□□□□ -1.42
PKP4-218ENST00000629219 LINC00315P59091 139 aa6.18□□□□□ -1.42
PKP4-218ENST00000629219 UBE2G1P62253 170 aa6.18□□□□□ -1.42
PKP4-218ENST00000629219 LINC01559Q495D7 138 aa6.18□□□□□ -1.42
PKP4-218ENST00000629219 EIF5AL1Q6IS14 154 aaKnown RBP6.18□□□□□ -1.42
PKP4-218ENST00000629219 TCTE3Q8IZS6 198 aa6.18□□□□□ -1.42
PKP4-218ENST00000629219 SLC25A29Q8N8R3 303 aa6.18□□□□□ -1.42
PKP4-218ENST00000629219 ZC2HC1AQ96GY0 325 aa6.18□□□□□ -1.42
PKP4-218ENST00000629219 LINC00479Q96M42 142 aa6.18□□□□□ -1.42
PKP4-218ENST00000629219 ZNF471Q9BX82 626 aaPredicted RBP6.18□□□□□ -1.42
PKP4-218ENST00000629219 SCRT2Q9NQ03 307 aa6.18□□□□□ -1.42
PKP4-218ENST00000629219 PGPEP1LA6NFU8 196 aa6.17□□□□□ -1.42
PKP4-218ENST00000629219 B4DEV8 164 aa6.17□□□□□ -1.42
PKP4-218ENST00000629219 KRBOX1C9JBD0 128 aa6.17□□□□□ -1.42
PKP4-218ENST00000629219 PFDN1O60925 122 aa6.17□□□□□ -1.42
PKP4-218ENST00000629219 LINC00694P0DN24 101 aa6.17□□□□□ -1.42
PKP4-218ENST00000629219 EVI2AP22794 236 aa6.17□□□□□ -1.42
PKP4-218ENST00000629219 S100A4P26447 101 aaKnown RBP6.17□□□□□ -1.42
PKP4-218ENST00000629219 AKR1C3P42330 323 aa6.17□□□□□ -1.42
PKP4-218ENST00000629219 CRIP1P50238 77 aa6.17□□□□□ -1.42
PKP4-218ENST00000629219 LINC01556Q5JQF7 62 aa6.17□□□□□ -1.42
PKP4-218ENST00000629219 UFSP1Q6NVU6 142 aa6.17□□□□□ -1.42
PKP4-218ENST00000629219 SYT8Q8NBV8 401 aa6.17□□□□□ -1.42
PKP4-218ENST00000629219 FAM213BQ8TBF2 198 aa6.17□□□□□ -1.42
PKP4-218ENST00000629219 SFT2D1Q8WV19 159 aa6.17□□□□□ -1.42
PKP4-218ENST00000629219 PARLQ9H300 379 aa6.17□□□□□ -1.42
PKP4-218ENST00000629219 C16orf90A8MZG2 172 aa6.16□□□□□ -1.42
PKP4-218ENST00000629219 PAGE4O60829 102 aa6.16□□□□□ -1.42
PKP4-218ENST00000629219 SH2D1AO60880 128 aa6.16□□□□□ -1.42
PKP4-218ENST00000629219 H2AFB1P0C5Y9 115 aa6.16□□□□□ -1.42
PKP4-218ENST00000629219 LELP1Q5T871 98 aa6.16□□□□□ -1.42
PKP4-218ENST00000629219 CST9LP1Q5W188 147 aa6.16□□□□□ -1.42
PKP4-218ENST00000629219 CDPF1Q6NVV7 123 aa6.16□□□□□ -1.42
PKP4-218ENST00000629219 TMUB2Q71RG4 321 aa6.16□□□□□ -1.42
PKP4-218ENST00000629219 C11orf52Q96A22 123 aa6.16□□□□□ -1.42
PKP4-218ENST00000629219 SMIM12Q96EX1 92 aa6.16□□□□□ -1.42
PKP4-218ENST00000629219 MLST8Q9BVC4 326 aa6.16□□□□□ -1.42
PKP4-218ENST00000629219 MANBALQ9NQG1 85 aa6.16□□□□□ -1.42
PKP4-218ENST00000629219 APOBP04114 4563 aaKnown RBP6.16□□□□□ -1.42
PKP4-218ENST00000629219 TRAV8-6A0A0B4J262 113 aa6.15□□□□□ -1.42
PKP4-218ENST00000629219 IGHV3-38A0A0C4DH36 116 aa6.15□□□□□ -1.42
PKP4-218ENST00000629219 TEX46H3BTG2 121 aa6.15□□□□□ -1.42
PKP4-218ENST00000629219 ERVFC1-1P60608 527 aa6.15□□□□□ -1.42
PKP4-218ENST00000629219 LAGE3Q14657 143 aa6.15□□□□□ -1.42
PKP4-218ENST00000629219 WFDC10BQ8IUB3 73 aa6.15□□□□□ -1.42
PKP4-218ENST00000629219 NHLRC2Q8NBF2 726 aa6.15□□□□□ -1.42
PKP4-218ENST00000629219 GTSF1LQ9H1H1 148 aa6.15□□□□□ -1.42
PKP4-218ENST00000629219 PGPEP1Q9NXJ5 209 aa6.15□□□□□ -1.42
PKP4-218ENST00000629219 MSRB1Q9NZV6 116 aa6.15□□□□□ -1.42
PKP4-218ENST00000629219 A0A087WWC5 75 aa6.14□□□□□ -1.43
PKP4-218ENST00000629219 TRBV10-1A0A0K0K1A3 114 aa6.14□□□□□ -1.43
PKP4-218ENST00000629219 LOC100131303A0A0U1RQF7 123 aa6.14□□□□□ -1.43
PKP4-218ENST00000629219 H3BVH4 76 aa6.14□□□□□ -1.43
PKP4-218ENST00000629219 EREGO14944 169 aa6.14□□□□□ -1.43
PKP4-218ENST00000629219 C1QBP02746 253 aa6.14□□□□□ -1.43
PKP4-218ENST00000629219 ARMS2P0C7Q2 107 aa6.14□□□□□ -1.43
PKP4-218ENST00000629219 TAGLN2P37802 199 aaKnown RBP6.14□□□□□ -1.43
PKP4-218ENST00000629219 SULT1A2P50226 295 aa6.14□□□□□ -1.43
PKP4-218ENST00000629219 SPATA12Q7Z6I5 190 aa6.14□□□□□ -1.43
PKP4-218ENST00000629219 ZFP82Q8N141 532 aa6.14□□□□□ -1.43
PKP4-218ENST00000629219 ATP6V0E2Q8NHE4 81 aa6.14□□□□□ -1.43
PKP4-218ENST00000629219 SFRP2Q96HF1 295 aa6.14□□□□□ -1.43
PKP4-218ENST00000629219 SSBP4Q9BWG4 385 aaPredicted RBP6.14□□□□□ -1.43
PKP4-218ENST00000629219 PHLDA3Q9Y5J5 127 aa6.14□□□□□ -1.43
PKP4-218ENST00000629219 SCO2A0A1W2PP80 73 aa6.13□□□□□ -1.43
PKP4-218ENST00000629219 IBA57-AS1B1ANH7 110 aa6.13□□□□□ -1.43
PKP4-218ENST00000629219 SNAI2O43623 268 aa6.13□□□□□ -1.43
PKP4-218ENST00000629219 CRYGDP07320 174 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms