RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 HCFC1P51610 2035 aa6.4□□□□□ -1.38
SMN2-214ENST00000626847 A0A0A6YYD4 124 aa6.4□□□□□ -1.39
SMN2-214ENST00000626847 TRBV5-4A0A0C4DH59 114 aa6.4□□□□□ -1.39
SMN2-214ENST00000626847 SPTY2D1-AS1A0A0U1RR47 76 aa6.4□□□□□ -1.39
SMN2-214ENST00000626847 LOC101059948A0A1B0GTJ6 334 aa6.4□□□□□ -1.39
SMN2-214ENST00000626847 LINC00473A8K010 186 aa6.4□□□□□ -1.39
SMN2-214ENST00000626847 NDUFC1O43677 76 aa6.4□□□□□ -1.39
SMN2-214ENST00000626847 NDUFS5O43920 106 aa6.4□□□□□ -1.39
SMN2-214ENST00000626847 SPINK4O60575 86 aa6.4□□□□□ -1.39
SMN2-214ENST00000626847 LGALS3P17931 250 aaKnown RBP6.4□□□□□ -1.39
SMN2-214ENST00000626847 DUTP33316 252 aaKnown RBP6.4□□□□□ -1.39
SMN2-214ENST00000626847 APOC4P55056 127 aa6.4□□□□□ -1.39
SMN2-214ENST00000626847 CACNG7P62955 275 aa6.4□□□□□ -1.39
SMN2-214ENST00000626847 NT5CQ8TCD5 201 aa6.4□□□□□ -1.39
SMN2-214ENST00000626847 WFDC5Q8TCV5 224 aa6.4□□□□□ -1.39
SMN2-214ENST00000626847 NPCDR1Q9BY65 106 aa6.4□□□□□ -1.39
SMN2-214ENST00000626847 LHFPL6Q9Y693 200 aa6.4□□□□□ -1.39
SMN2-214ENST00000626847 STAB1Q9NY15 2570 aa6.4□□□□□ -1.39
SMN2-214ENST00000626847 JMJD1CQ15652 2540 aa6.39□□□□□ -1.39
SMN2-214ENST00000626847 SS18L1O75177 396 aaPredicted RBP6.39□□□□□ -1.39
SMN2-214ENST00000626847 BGLAPP02818 100 aa6.39□□□□□ -1.39
SMN2-214ENST00000626847 CD70P32970 193 aa6.39□□□□□ -1.39
SMN2-214ENST00000626847 MYCNOSP40205 109 aa6.39□□□□□ -1.39
SMN2-214ENST00000626847 SUB1P53999 127 aaKnown RBP eCLIP6.39□□□□□ -1.39
SMN2-214ENST00000626847 TMEM52BQ4KMG9 183 aa6.39□□□□□ -1.39
SMN2-214ENST00000626847 ORMDL2Q53FV1 153 aa6.39□□□□□ -1.39
SMN2-214ENST00000626847 ZFP2Q6ZN57 461 aa6.39□□□□□ -1.39
SMN2-214ENST00000626847 PHPT1Q9NRX4 125 aaPredicted RBP6.39□□□□□ -1.39
SMN2-214ENST00000626847 SLC25A15Q9Y619 301 aa6.39□□□□□ -1.39
SMN2-214ENST00000626847 TMSB15BA0A087X1C1 80 aa6.38□□□□□ -1.39
SMN2-214ENST00000626847 LTAP01374 205 aa6.38□□□□□ -1.39
SMN2-214ENST00000626847 RFPL3SP0C7P2 107 aa6.38□□□□□ -1.39
SMN2-214ENST00000626847 FHL1Q13642 323 aa6.38□□□□□ -1.39
SMN2-214ENST00000626847 GDF5OSQ5U4N7 250 aa6.38□□□□□ -1.39
SMN2-214ENST00000626847 OR8A1Q8NGG7 326 aa6.38□□□□□ -1.39
SMN2-214ENST00000626847 METTL26Q96S19 204 aa6.38□□□□□ -1.39
SMN2-214ENST00000626847 TMEM243Q9BU79 118 aa6.38□□□□□ -1.39
SMN2-214ENST00000626847 DEFB127Q9H1M4 99 aa6.38□□□□□ -1.39
SMN2-214ENST00000626847 PRRC2CQ9Y520 2896 aaKnown RBP6.37□□□□□ -1.39
SMN2-214ENST00000626847 COL6A5A8TX70 2615 aa6.37□□□□□ -1.39
SMN2-214ENST00000626847 COX6B1P14854 86 aa6.37□□□□□ -1.39
SMN2-214ENST00000626847 FCER1GP30273 86 aa6.37□□□□□ -1.39
SMN2-214ENST00000626847 CEMP1Q6PRD7 247 aaPredicted RBP6.37□□□□□ -1.39
SMN2-214ENST00000626847 SCGB1D4Q6XE38 83 aa6.37□□□□□ -1.39
SMN2-214ENST00000626847 LY6G5BQ8NDX9 201 aa6.37□□□□□ -1.39
SMN2-214ENST00000626847 EEF1AKMT3Q96AZ1 226 aa6.37□□□□□ -1.39
SMN2-214ENST00000626847 ZNF799Q96GE5 643 aa6.37□□□□□ -1.39
SMN2-214ENST00000626847 TM2D3Q9BRN9 247 aa6.37□□□□□ -1.39
SMN2-214ENST00000626847 PRRC2AP48634 2157 aaKnown RBP6.37□□□□□ -1.39
SMN2-214ENST00000626847 A0A0D9SEW6 157 aa6.36□□□□□ -1.39
SMN2-214ENST00000626847 MRPS12O15235 138 aaKnown RBP6.36□□□□□ -1.39
SMN2-214ENST00000626847 IGLV3-25P01717 112 aa6.36□□□□□ -1.39
SMN2-214ENST00000626847 CCL1P22362 96 aa6.36□□□□□ -1.39
SMN2-214ENST00000626847 SAA4P35542 130 aa6.36□□□□□ -1.39
SMN2-214ENST00000626847 DAD1P61803 113 aa6.36□□□□□ -1.39
SMN2-214ENST00000626847 ZNF497Q6ZNH5 498 aa6.36□□□□□ -1.39
SMN2-214ENST00000626847 VSIG2Q96IQ7 327 aa6.36□□□□□ -1.39
SMN2-214ENST00000626847 C1orf147Q96MC9 270 aaPredicted RBP6.36□□□□□ -1.39
SMN2-214ENST00000626847 ZNF492Q9P255 531 aa6.36□□□□□ -1.39
SMN2-214ENST00000626847 PRO1854Q9UHT4 67 aa6.36□□□□□ -1.39
SMN2-214ENST00000626847 WDR83OSQ9Y284 106 aa6.36□□□□□ -1.39
SMN2-214ENST00000626847 HIGD1CA8MV81 97 aa6.35□□□□□ -1.39
SMN2-214ENST00000626847 HMGN2P05204 90 aaKnown RBP6.35□□□□□ -1.39
SMN2-214ENST00000626847 SLC25A16P16260 332 aa6.35□□□□□ -1.39
SMN2-214ENST00000626847 ZNF823P16415 610 aa6.35□□□□□ -1.39
SMN2-214ENST00000626847 IFI27P40305 119 aaPredicted RBP6.35□□□□□ -1.39
SMN2-214ENST00000626847 RIGQ13278 110 aa6.35□□□□□ -1.39
SMN2-214ENST00000626847 C2orf82Q6UX34 121 aa6.35□□□□□ -1.39
SMN2-214ENST00000626847 FP248Q71RG6 208 aaPredicted RBP6.35□□□□□ -1.39
SMN2-214ENST00000626847 KTN1-AS1Q86SY8 53 aa6.35□□□□□ -1.39
SMN2-214ENST00000626847 C11orf45Q8TAV5 145 aa6.35□□□□□ -1.39
SMN2-214ENST00000626847 RBM12B-AS1Q9P1G2 102 aa6.35□□□□□ -1.39
SMN2-214ENST00000626847 GTF3C1Q12789 2109 aa6.35□□□□□ -1.39
SMN2-214ENST00000626847 KIAA2026Q5HYC2 2103 aa6.35□□□□□ -1.39
SMN2-214ENST00000626847 C17orf100A8MU93 164 aa6.34□□□□□ -1.39
SMN2-214ENST00000626847 INS-IGF2F8WCM5 200 aa6.34□□□□□ -1.39
SMN2-214ENST00000626847 SMKR1H3BMG3 65 aa6.34□□□□□ -1.39
SMN2-214ENST00000626847 PRYO14603 147 aa6.34□□□□□ -1.39
SMN2-214ENST00000626847 IGLV2-8P01709 118 aa6.34□□□□□ -1.39
SMN2-214ENST00000626847 ARL14EPLP0DKL9 152 aa6.34□□□□□ -1.39
SMN2-214ENST00000626847 PLNP26678 52 aa6.34□□□□□ -1.39
SMN2-214ENST00000626847 FXYD4P59646 89 aa6.34□□□□□ -1.39
SMN2-214ENST00000626847 FXYD3Q14802 87 aa6.34□□□□□ -1.39
SMN2-214ENST00000626847 MDP1Q86V88 176 aa6.34□□□□□ -1.39
SMN2-214ENST00000626847 DAND5Q8N907 189 aa6.34□□□□□ -1.39
SMN2-214ENST00000626847 KIAA1549Q9HCM3 1950 aa6.34□□□□□ -1.4
SMN2-214ENST00000626847 IGHV5-10-1A0A0J9YXX1 117 aa6.33□□□□□ -1.4
SMN2-214ENST00000626847 LINC01546A6NGU7 62 aa6.33□□□□□ -1.4
SMN2-214ENST00000626847 SNRPD3P62318 126 aaKnown RBP6.33□□□□□ -1.4
SMN2-214ENST00000626847 SPANXN5Q5MJ07 72 aa6.33□□□□□ -1.4
SMN2-214ENST00000626847 PVRIGQ6DKI7 326 aa6.33□□□□□ -1.4
SMN2-214ENST00000626847 SFTPA2Q8IWL1 248 aa6.33□□□□□ -1.4
SMN2-214ENST00000626847 TAC3Q9UHF0 121 aa6.33□□□□□ -1.4
SMN2-214ENST00000626847 ABCA4P78363 2273 aa6.33□□□□□ -1.4
SMN2-214ENST00000626847 TRPM6Q9BX84 2022 aa6.33□□□□□ -1.4
SMN2-214ENST00000626847 TRBV27A0A0K0K1C4 114 aa6.33□□□□□ -1.4
SMN2-214ENST00000626847 K7EMT4 169 aa6.33□□□□□ -1.4
SMN2-214ENST00000626847 CCL21O00585 134 aa6.33□□□□□ -1.4
SMN2-214ENST00000626847 UBE2L6O14933 153 aa6.33□□□□□ -1.4
SMN2-214ENST00000626847 MIC13Q5XKP0 118 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms