RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 IFNA7P01567 189 aa12.93□□□□□ -0.34
ATG4B-226ENST00000625810 S100A4P26447 101 aaKnown RBP12.93□□□□□ -0.34
ATG4B-226ENST00000625810 LINC01556Q5JQF7 62 aa12.93□□□□□ -0.34
ATG4B-226ENST00000625810 PTH2Q96A98 100 aa12.93□□□□□ -0.34
ATG4B-226ENST00000625810 EPM2AB3EWF7 344 aa12.92□□□□□ -0.34
ATG4B-226ENST00000625810 RNASE3P12724 160 aaKnown RBP12.92□□□□□ -0.34
ATG4B-226ENST00000625810 LINC00479Q96M42 142 aa12.92□□□□□ -0.34
ATG4B-226ENST00000625810 FAT1Q14517 4588 aa12.91□□□□□ -0.34
ATG4B-226ENST00000625810 CTXND1A0A1B0GTU2 59 aa12.91□□□□□ -0.34
ATG4B-226ENST00000625810 RNF222A6NCQ9 220 aa12.91□□□□□ -0.34
ATG4B-226ENST00000625810 MGST1P10620 155 aaKnown RBP12.91□□□□□ -0.34
ATG4B-226ENST00000625810 XGP55808 180 aa12.91□□□□□ -0.34
ATG4B-226ENST00000625810 UBE2G2P60604 165 aa12.91□□□□□ -0.34
ATG4B-226ENST00000625810 ATP6V0E2Q8NHE4 81 aa12.91□□□□□ -0.34
ATG4B-226ENST00000625810 FABP5P3A8MUU1 101 aa12.9□□□□□ -0.34
ATG4B-226ENST00000625810 IBA57-AS1B1ANH7 110 aa12.9□□□□□ -0.34
ATG4B-226ENST00000625810 IGHV3-30P01768 117 aa12.9□□□□□ -0.34
ATG4B-226ENST00000625810 IGHV3-33P01772 117 aa12.9□□□□□ -0.34
ATG4B-226ENST00000625810 IGHV3-30-3P0DP02 117 aa12.9□□□□□ -0.34
ATG4B-226ENST00000625810 IGHV3-30-5P0DP03 117 aa12.9□□□□□ -0.34
ATG4B-226ENST00000625810 KRTAP10-1P60331 282 aa12.9□□□□□ -0.34
ATG4B-226ENST00000625810 LGALSLQ3ZCW2 172 aaPredicted RBP12.9□□□□□ -0.34
ATG4B-226ENST00000625810 AKR1C8PQ5T2L2 129 aa12.9□□□□□ -0.34
ATG4B-226ENST00000625810 LELP1Q5T871 98 aa12.9□□□□□ -0.34
ATG4B-226ENST00000625810 OR2T35Q8NGX2 323 aa12.9□□□□□ -0.34
ATG4B-226ENST00000625810 GTSF1LQ9H1H1 148 aa12.9□□□□□ -0.34
ATG4B-226ENST00000625810 Q9HAA7 133 aa12.9□□□□□ -0.34
ATG4B-226ENST00000625810 ARL2-SNX15V9GYD0 113 aa12.9□□□□□ -0.34
ATG4B-226ENST00000625810 IGKV3D-20A0A0C4DH25 116 aa12.89□□□□□ -0.35
ATG4B-226ENST00000625810 GCSHP23434 173 aa12.89□□□□□ -0.35
ATG4B-226ENST00000625810 ASIPP42127 132 aa12.89□□□□□ -0.35
ATG4B-226ENST00000625810 ZNF726P1Q15940 193 aa12.89□□□□□ -0.35
ATG4B-226ENST00000625810 A8MWV9 139 aa12.88□□□□□ -0.35
ATG4B-226ENST00000625810 PEX7O00628 323 aa12.88□□□□□ -0.35
ATG4B-226ENST00000625810 FGF8P55075 233 aaPredicted RBP12.88□□□□□ -0.35
ATG4B-226ENST00000625810 NKX6-2Q9C056 277 aaPredicted RBP12.88□□□□□ -0.35
ATG4B-226ENST00000625810 PARLQ9H300 379 aa12.88□□□□□ -0.35
ATG4B-226ENST00000625810 ZFP2Q6ZN57 461 aa12.87□□□□□ -0.35
ATG4B-226ENST00000625810 HIST1H2BAQ96A08 127 aa12.87□□□□□ -0.35
ATG4B-226ENST00000625810 IGLV5-52A0A0A0MRZ9 124 aa12.86□□□□□ -0.35
ATG4B-226ENST00000625810 GAGE12JA6NER3 117 aa12.86□□□□□ -0.35
ATG4B-226ENST00000625810 FAM74A7A6NL05 159 aa12.86□□□□□ -0.35
ATG4B-226ENST00000625810 B4DEV8 164 aa12.86□□□□□ -0.35
ATG4B-226ENST00000625810 GAGE1Q13065 139 aa12.86□□□□□ -0.35
ATG4B-226ENST00000625810 GAGE4Q13068 117 aa12.86□□□□□ -0.35
ATG4B-226ENST00000625810 GAGE5Q13069 117 aa12.86□□□□□ -0.35
ATG4B-226ENST00000625810 GAGE13Q4V321 117 aa12.86□□□□□ -0.35
ATG4B-226ENST00000625810 PIK3CD-AS1Q5SR53 167 aa12.86□□□□□ -0.35
ATG4B-226ENST00000625810 Q6ZSN1 163 aa12.86□□□□□ -0.35
ATG4B-226ENST00000625810 Q86TA4 180 aa12.86□□□□□ -0.35
ATG4B-226ENST00000625810 HERC1Q15751 4861 aa12.86□□□□□ -0.35
ATG4B-226ENST00000625810 VPS13BQ7Z7G8 4022 aa12.86□□□□□ -0.35
ATG4B-226ENST00000625810 LRCOL1A6NCL2 159 aa12.85□□□□□ -0.35
ATG4B-226ENST00000625810 FRZBQ92765 325 aa12.85□□□□□ -0.35
ATG4B-226ENST00000625810 IL36BQ9NZH7 164 aa12.85□□□□□ -0.35
ATG4B-226ENST00000625810 DMBT1Q9UGM3 2413 aaPredicted RBP12.85□□□□□ -0.35
ATG4B-226ENST00000625810 H3BVH4 76 aa12.84□□□□□ -0.35
ATG4B-226ENST00000625810 M0R036 132 aa12.84□□□□□ -0.35
ATG4B-226ENST00000625810 UBE2G1P62253 170 aa12.84□□□□□ -0.35
ATG4B-226ENST00000625810 SYT8Q8NBV8 401 aa12.84□□□□□ -0.35
ATG4B-226ENST00000625810 NTN5Q8WTR8 489 aaPredicted RBP12.84□□□□□ -0.35
ATG4B-226ENST00000625810 JPT2Q9H910 190 aa12.84□□□□□ -0.35
ATG4B-226ENST00000625810 ZFP30Q9Y2G7 519 aa12.84□□□□□ -0.35
ATG4B-226ENST00000625810 MAP1LC3B2A6NCE7 125 aa12.83□□□□□ -0.36
ATG4B-226ENST00000625810 ARPC5O15511 151 aa12.83□□□□□ -0.36
ATG4B-226ENST00000625810 INAFM2P0DMQ5 153 aa12.83□□□□□ -0.36
ATG4B-226ENST00000625810 Q5VSD8 79 aa12.83□□□□□ -0.36
ATG4B-226ENST00000625810 DMRTA1Q5VZB9 504 aa12.83□□□□□ -0.36
ATG4B-226ENST00000625810 ZC2HC1AQ96GY0 325 aa12.83□□□□□ -0.36
ATG4B-226ENST00000625810 TM2D2Q9BX73 214 aa12.83□□□□□ -0.36
ATG4B-226ENST00000625810 MAP1LC3BQ9GZQ8 125 aa12.83□□□□□ -0.36
ATG4B-226ENST00000625810 GRIFINA4D1Z8 144 aa12.82□□□□□ -0.36
ATG4B-226ENST00000625810 ARMS2P0C7Q2 107 aa12.82□□□□□ -0.36
ATG4B-226ENST00000625810 CRIP1P50238 77 aa12.82□□□□□ -0.36
ATG4B-226ENST00000625810 Q8N814 137 aa12.82□□□□□ -0.36
ATG4B-226ENST00000625810 STOML3Q8TAV4 291 aa12.82□□□□□ -0.36
ATG4B-226ENST00000625810 FMC1Q96HJ9 113 aa12.82□□□□□ -0.36
ATG4B-226ENST00000625810 SAMD10Q9BYL1 202 aa12.82□□□□□ -0.36
ATG4B-226ENST00000625810 KRBOX1C9JBD0 128 aa12.81□□□□□ -0.36
ATG4B-226ENST00000625810 SH2D1AO60880 128 aa12.81□□□□□ -0.36
ATG4B-226ENST00000625810 LAGE3Q14657 143 aa12.81□□□□□ -0.36
ATG4B-226ENST00000625810 FAM162BQ5T6X4 162 aa12.81□□□□□ -0.36
ATG4B-226ENST00000625810 CST9LP1Q5W188 147 aa12.81□□□□□ -0.36
ATG4B-226ENST00000625810 OR11H4Q8NGC9 324 aa12.81□□□□□ -0.36
ATG4B-226ENST00000625810 RHODO00212 210 aa12.8□□□□□ -0.36
ATG4B-226ENST00000625810 SMR3BP02814 79 aaPredicted RBP12.8□□□□□ -0.36
ATG4B-226ENST00000625810 RGS21Q2M5E4 152 aa12.8□□□□□ -0.36
ATG4B-226ENST00000625810 DNLZQ5SXM8 178 aa12.8□□□□□ -0.36
ATG4B-226ENST00000625810 FAM74A4Q5TZK3 123 aa12.8□□□□□ -0.36
ATG4B-226ENST00000625810 C14orf178Q8N769 122 aaPredicted RBP12.8□□□□□ -0.36
ATG4B-226ENST00000625810 CYTL1Q9NRR1 136 aa12.8□□□□□ -0.36
ATG4B-226ENST00000625810 PHLDA3Q9Y5J5 127 aa12.8□□□□□ -0.36
ATG4B-226ENST00000625810 MYCBP2O75592 4640 aa12.79□□□□□ -0.36
ATG4B-226ENST00000625810 A0A087WWC5 75 aa12.79□□□□□ -0.36
ATG4B-226ENST00000625810 TMSB15BA0A087X1C1 80 aa12.79□□□□□ -0.36
ATG4B-226ENST00000625810 G3V3Q6 166 aa12.79□□□□□ -0.36
ATG4B-226ENST00000625810 LINC00694P0DN24 101 aa12.79□□□□□ -0.36
ATG4B-226ENST00000625810 TPT1P13693 172 aaKnown RBP12.79□□□□□ -0.36
ATG4B-226ENST00000625810 UFSP1Q6NVU6 142 aa12.79□□□□□ -0.36
ATG4B-226ENST00000625810 COX8CQ7Z4L0 72 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms