RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 PSMB8P28062 276 aa6.99□□□□□ -1.29
VCL-206ENST00000623461 LOXP28300 417 aaPredicted RBP6.99□□□□□ -1.29
VCL-206ENST00000623461 RNF138Q8WVD3 245 aa6.99□□□□□ -1.29
VCL-206ENST00000623461 TIMM17AQ99595 171 aa6.99□□□□□ -1.29
VCL-206ENST00000623461 hADV29S1A0JD25 119 aa6.99□□□□□ -1.29
VCL-206ENST00000623461 PFN2P35080 140 aa6.99□□□□□ -1.29
VCL-206ENST00000623461 ZFP2Q6ZN57 461 aa6.99□□□□□ -1.29
VCL-206ENST00000623461 ODF3L1Q8IXM7 274 aa6.99□□□□□ -1.29
VCL-206ENST00000623461 FGF23Q9GZV9 251 aaPredicted RBP6.99□□□□□ -1.29
VCL-206ENST00000623461 KLHL30-AS1Q8NEE0 82 aa6.99□□□□□ -1.29
VCL-206ENST00000623461 MSRB2Q9Y3D2 182 aa6.99□□□□□ -1.29
VCL-206ENST00000623461 A0A1W2PRX2 142 aa6.98□□□□□ -1.29
VCL-206ENST00000623461 LGALS9O00182 355 aa6.98□□□□□ -1.29
VCL-206ENST00000623461 TCL1BO95988 128 aa6.98□□□□□ -1.29
VCL-206ENST00000623461 APOC4P55056 127 aa6.98□□□□□ -1.29
VCL-206ENST00000623461 IGHV3-53P01767 116 aa6.98□□□□□ -1.29
VCL-206ENST00000623461 MED14OSP0DP75 135 aa6.98□□□□□ -1.29
VCL-206ENST00000623461 TTTY13Q9BZ97 58 aa6.98□□□□□ -1.29
VCL-206ENST00000623461 IGLV2-8P01709 118 aa6.98□□□□□ -1.29
VCL-206ENST00000623461 UBE2E1P51965 193 aa6.98□□□□□ -1.29
VCL-206ENST00000623461 KIAA1549Q9HCM3 1950 aa6.98□□□□□ -1.29
VCL-206ENST00000623461 OVOL3O00110 214 aa6.98□□□□□ -1.29
VCL-206ENST00000623461 C11orf53Q8IXP5 236 aa6.98□□□□□ -1.29
VCL-206ENST00000623461 Q9H8V8 135 aa6.98□□□□□ -1.29
VCL-206ENST00000623461 IGLV3-9A0A075B6K5 115 aa6.98□□□□□ -1.29
VCL-206ENST00000623461 SLC25A29Q8N8R3 303 aa6.98□□□□□ -1.29
VCL-206ENST00000623461 NSUN5P1Q3KNT7 163 aa6.97□□□□□ -1.29
VCL-206ENST00000623461 PIP4P2Q8N4L2 257 aa6.97□□□□□ -1.29
VCL-206ENST00000623461 C3orf22Q8N5N4 141 aa6.97□□□□□ -1.29
VCL-206ENST00000623461 PTH2Q96A98 100 aa6.97□□□□□ -1.29
VCL-206ENST00000623461 SPINK13Q1W4C9 94 aa6.97□□□□□ -1.29
VCL-206ENST00000623461 LINC01356Q8N9X3 169 aa6.97□□□□□ -1.29
VCL-206ENST00000623461 I3L2K1 104 aa6.97□□□□□ -1.29
VCL-206ENST00000623461 COL8A2P25067 703 aa6.97□□□□□ -1.29
VCL-206ENST00000623461 Q8N1Y9 231 aa6.97□□□□□ -1.29
VCL-206ENST00000623461 KAAG1Q9UBP8 84 aa6.97□□□□□ -1.29
VCL-206ENST00000623461 JMJD7-PLA2G4BH0Y9G9 81 aa6.97□□□□□ -1.29
VCL-206ENST00000623461 P0C879 139 aa6.97□□□□□ -1.29
VCL-206ENST00000623461 KLK9Q9UKQ9 250 aa6.97□□□□□ -1.29
VCL-206ENST00000623461 WNK1Q9H4A3 2382 aa6.97□□□□□ -1.29
VCL-206ENST00000623461 FOXE3Q13461 319 aa6.97□□□□□ -1.29
VCL-206ENST00000623461 IGKV3D-7A0A0C4DH55 119 aa6.96□□□□□ -1.29
VCL-206ENST00000623461 RS1O15537 224 aa6.96□□□□□ -1.29
VCL-206ENST00000623461 IGHV1-69P01742 117 aa6.96□□□□□ -1.29
VCL-206ENST00000623461 SAA4P35542 130 aa6.96□□□□□ -1.29
VCL-206ENST00000623461 Q6ZS92 163 aa6.96□□□□□ -1.29
VCL-206ENST00000623461 RPL39LQ96EH5 51 aaKnown RBP6.96□□□□□ -1.29
VCL-206ENST00000623461 SUMO4Q6EEV6 95 aa6.96□□□□□ -1.3
VCL-206ENST00000623461 ZNRF2Q8NHG8 242 aa6.96□□□□□ -1.3
VCL-206ENST00000623461 H3BUX3 64 aa6.96□□□□□ -1.3
VCL-206ENST00000623461 GDF5OSQ5U4N7 250 aa6.96□□□□□ -1.3
VCL-206ENST00000623461 MBD6Q96DN6 1003 aa6.96□□□□□ -1.3
VCL-206ENST00000623461 A0A0G2JNJ9 132 aa6.96□□□□□ -1.3
VCL-206ENST00000623461 MSRB1Q9NZV6 116 aa6.96□□□□□ -1.3
VCL-206ENST00000623461 Q9UFV3 132 aa6.96□□□□□ -1.3
VCL-206ENST00000623461 CRYGBP07316 175 aa6.96□□□□□ -1.3
VCL-206ENST00000623461 WI2-2373I1.2A0A1W2PRP0 233 aa6.95□□□□□ -1.3
VCL-206ENST00000623461 DEFB131AP59861 70 aa6.95□□□□□ -1.3
VCL-206ENST00000623461 NBL1P41271 181 aa6.95□□□□□ -1.3
VCL-206ENST00000623461 H3BUA1 57 aa6.95□□□□□ -1.3
VCL-206ENST00000623461 E7EQL1 145 aa6.95□□□□□ -1.3
VCL-206ENST00000623461 GNRH2O43555 120 aa6.95□□□□□ -1.3
VCL-206ENST00000623461 IMUPQ9GZP8 106 aa6.95□□□□□ -1.3
VCL-206ENST00000623461 IGHV7-4-1A0A0J9YVY3 117 aa6.95□□□□□ -1.3
VCL-206ENST00000623461 DIAPH2-AS1Q14236 149 aa6.95□□□□□ -1.3
VCL-206ENST00000623461 ZNF503Q96F45 646 aa6.95□□□□□ -1.3
VCL-206ENST00000623461 LHBP01229 141 aa6.94□□□□□ -1.3
VCL-206ENST00000623461 MED13Q9UHV7 2174 aa6.94□□□□□ -1.3
VCL-206ENST00000623461 IGKV1OR2-108A0A075B7D4 117 aa6.94□□□□□ -1.3
VCL-206ENST00000623461 P0DMU3 169 aa6.94□□□□□ -1.3
VCL-206ENST00000623461 FAM231AP0DMU4 169 aa6.94□□□□□ -1.3
VCL-206ENST00000623461 FAM231CP0DMU5 169 aa6.94□□□□□ -1.3
VCL-206ENST00000623461 DSCAMO60469 2012 aa6.94□□□□□ -1.3
VCL-206ENST00000623461 PTPRQQ9UMZ3 2332 aa6.93□□□□□ -1.3
VCL-206ENST00000623461 IGHV3-38A0A0C4DH36 116 aa6.93□□□□□ -1.3
VCL-206ENST00000623461 A0A0J9YXV3 536 aa6.93□□□□□ -1.3
VCL-206ENST00000623461 IGKV1-17P01599 117 aa6.93□□□□□ -1.3
VCL-206ENST00000623461 C9orf47Q6ZRZ4 202 aa6.93□□□□□ -1.3
VCL-206ENST00000623461 ZNF295-AS1Q8N0V1 137 aa6.93□□□□□ -1.3
VCL-206ENST00000623461 IGHV3-16A0A0C4DH30 117 aa6.93□□□□□ -1.3
VCL-206ENST00000623461 K7EIM0 57 aa6.93□□□□□ -1.3
VCL-206ENST00000623461 SORL1Q92673 2214 aa6.93□□□□□ -1.3
VCL-206ENST00000623461 UBE2E2Q96LR5 201 aa6.93□□□□□ -1.3
VCL-206ENST00000623461 ADAMTS9Q9P2N4 1935 aa6.93□□□□□ -1.3
VCL-206ENST00000623461 SVIPQ8NHG7 77 aa6.93□□□□□ -1.3
VCL-206ENST00000623461 MLST8Q9BVC4 326 aa6.93□□□□□ -1.3
VCL-206ENST00000623461 NPBQ8NG41 125 aa6.93□□□□□ -1.3
VCL-206ENST00000623461 IL17DQ8TAD2 202 aa6.93□□□□□ -1.3
VCL-206ENST00000623461 CLEC2BQ92478 149 aa6.93□□□□□ -1.3
VCL-206ENST00000623461 COL5A1P20908 1838 aaPredicted RBP6.93□□□□□ -1.3
VCL-206ENST00000623461 MED13LQ71F56 2210 aa6.93□□□□□ -1.3
VCL-206ENST00000623461 C2orf91Q6ZV80 131 aa6.93□□□□□ -1.3
VCL-206ENST00000623461 TMEM105Q8N8V8 129 aa6.92□□□□□ -1.3
VCL-206ENST00000623461 SND1-IT1Q9HBX3 110 aa6.92□□□□□ -1.3
VCL-206ENST00000623461 LINC01619G3V211 115 aa6.92□□□□□ -1.3
VCL-206ENST00000623461 G3V318 75 aa6.92□□□□□ -1.3
VCL-206ENST00000623461 J3QLI3 93 aa6.92□□□□□ -1.3
VCL-206ENST00000623461 J3QKU1 62 aa6.92□□□□□ -1.3
VCL-206ENST00000623461 LOXL1Q08397 574 aaPredicted RBP6.92□□□□□ -1.3
VCL-206ENST00000623461 RNASE13Q5GAN3 156 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms