RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 EVI2AP22794 236 aa12.15□□□□□ -0.46
LDB3-208ENST00000623007 IFI27P40305 119 aaPredicted RBP12.15□□□□□ -0.46
LDB3-208ENST00000623007 CD300EQ496F6 205 aaPredicted RBP12.15□□□□□ -0.46
LDB3-208ENST00000623007 CDPF1Q6NVV7 123 aa12.15□□□□□ -0.46
LDB3-208ENST00000623007 ZNF664Q8N3J9 261 aa12.15□□□□□ -0.46
LDB3-208ENST00000623007 NPYP01303 97 aa12.14□□□□□ -0.47
LDB3-208ENST00000623007 HBDP02042 147 aa12.14□□□□□ -0.47
LDB3-208ENST00000623007 PIK3CD-AS1Q5SR53 167 aa12.14□□□□□ -0.47
LDB3-208ENST00000623007 SPATA12Q7Z6I5 190 aa12.14□□□□□ -0.47
LDB3-208ENST00000623007 C20orf78Q9BR46 151 aa12.14□□□□□ -0.47
LDB3-208ENST00000623007 MAP6D1Q9H9H5 199 aa12.14□□□□□ -0.47
LDB3-208ENST00000623007 KIR2DL5BA0A0G2JN68 375 aa12.13□□□□□ -0.47
LDB3-208ENST00000623007 KIR2DL5BA0A0G2JPC4 375 aa12.13□□□□□ -0.47
LDB3-208ENST00000623007 KIR2DL5AQ8N109 375 aa12.13□□□□□ -0.47
LDB3-208ENST00000623007 POM121L12Q8N7R1 296 aa12.13□□□□□ -0.47
LDB3-208ENST00000623007 Q8N8P6 123 aa12.13□□□□□ -0.47
LDB3-208ENST00000623007 DUX3Q96PT4 197 aa12.13□□□□□ -0.47
LDB3-208ENST00000623007 LINC00467Q9BRT7 94 aa12.13□□□□□ -0.47
LDB3-208ENST00000623007 ZNF256Q9Y2P7 627 aaPredicted RBP12.13□□□□□ -0.47
LDB3-208ENST00000623007 CCDC168Q8NDH2 2452 aa12.13□□□□□ -0.47
LDB3-208ENST00000623007 SYS1-DBNDD2H3BUS1 97 aa12.13□□□□□ -0.47
LDB3-208ENST00000623007 GNRH2O43555 120 aa12.13□□□□□ -0.47
LDB3-208ENST00000623007 G0S2P27469 103 aa12.13□□□□□ -0.47
LDB3-208ENST00000623007 DDTP30046 118 aa12.13□□□□□ -0.47
LDB3-208ENST00000623007 SPINK13Q1W4C9 94 aa12.13□□□□□ -0.47
LDB3-208ENST00000623007 C9orf85Q96MD7 179 aa12.13□□□□□ -0.47
LDB3-208ENST00000623007 NOTCH2Q04721 2471 aa12.12□□□□□ -0.47
LDB3-208ENST00000623007 A0A1W2PRX2 142 aa12.12□□□□□ -0.47
LDB3-208ENST00000623007 LINC01549A6NIU2 74 aa12.12□□□□□ -0.47
LDB3-208ENST00000623007 NUTF2P61970 127 aaKnown RBP12.12□□□□□ -0.47
LDB3-208ENST00000623007 TIMM8BQ9Y5J9 83 aaPredicted RBP12.12□□□□□ -0.47
LDB3-208ENST00000623007 SELENOKQ9Y6D0 94 aa12.12□□□□□ -0.47
LDB3-208ENST00000623007 IGHV3-16A0A0C4DH30 117 aa12.11□□□□□ -0.47
LDB3-208ENST00000623007 LOC389332A0A1B0GUA5 103 aa12.11□□□□□ -0.47
LDB3-208ENST00000623007 Q6ZQT7 251 aa12.11□□□□□ -0.47
LDB3-208ENST00000623007 Q8N976 141 aa12.11□□□□□ -0.47
LDB3-208ENST00000623007 MXRA5Q9NR99 2828 aa12.11□□□□□ -0.47
LDB3-208ENST00000623007 OR11H12B2RN74 326 aa12.1□□□□□ -0.47
LDB3-208ENST00000623007 NCR2O95944 276 aa12.1□□□□□ -0.47
LDB3-208ENST00000623007 IGKV3-20P01619 116 aa12.1□□□□□ -0.47
LDB3-208ENST00000623007 DEFA6Q01524 100 aa12.1□□□□□ -0.47
LDB3-208ENST00000623007 KIR3DS1Q14943 382 aa12.1□□□□□ -0.47
LDB3-208ENST00000623007 PTH2Q96A98 100 aa12.1□□□□□ -0.47
LDB3-208ENST00000623007 SMR3AQ99954 134 aa12.1□□□□□ -0.47
LDB3-208ENST00000623007 NDUFAF3Q9BU61 184 aa12.1□□□□□ -0.47
LDB3-208ENST00000623007 ZFHX3Q15911 3703 aa12.1□□□□□ -0.47
LDB3-208ENST00000623007 ITPR2Q14571 2701 aa12.1□□□□□ -0.47
LDB3-208ENST00000623007 FCER1GP30273 86 aa12.1□□□□□ -0.47
LDB3-208ENST00000623007 RPL32P62910 135 aaKnown RBP12.1□□□□□ -0.47
LDB3-208ENST00000623007 PRR31Q5SQ13 230 aa12.1□□□□□ -0.47
LDB3-208ENST00000623007 ZNF747Q9BV97 191 aa12.1□□□□□ -0.47
LDB3-208ENST00000623007 SMKR1H3BMG3 65 aa12.09□□□□□ -0.47
LDB3-208ENST00000623007 INSP01308 110 aa12.09□□□□□ -0.47
LDB3-208ENST00000623007 STHQ8IWL8 128 aa12.09□□□□□ -0.47
LDB3-208ENST00000623007 Q8N1Y9 231 aa12.09□□□□□ -0.47
LDB3-208ENST00000623007 C11orf44Q8N8P7 122 aa12.09□□□□□ -0.47
LDB3-208ENST00000623007 NRACQ8N912 160 aa12.09□□□□□ -0.47
LDB3-208ENST00000623007 TRAV12-2A0A075B6T6 113 aa12.08□□□□□ -0.48
LDB3-208ENST00000623007 KNCNA6PVL3 124 aa12.08□□□□□ -0.48
LDB3-208ENST00000623007 LINC00587B1AMM8 73 aa12.08□□□□□ -0.48
LDB3-208ENST00000623007 ORMDL2Q53FV1 153 aa12.08□□□□□ -0.48
LDB3-208ENST00000623007 MRPL52Q86TS9 123 aaKnown RBP12.08□□□□□ -0.48
LDB3-208ENST00000623007 TRAV9-2A0A087WT02 112 aa12.07□□□□□ -0.48
LDB3-208ENST00000623007 CBY3A6NI87 242 aa12.07□□□□□ -0.48
LDB3-208ENST00000623007 HSBP1L1C9JCN9 74 aa12.07□□□□□ -0.48
LDB3-208ENST00000623007 IGLV1-51P01701 117 aa12.07□□□□□ -0.48
LDB3-208ENST00000623007 C14orf178Q8N769 122 aaPredicted RBP12.07□□□□□ -0.48
LDB3-208ENST00000623007 PRO1933Q9H354 126 aa12.07□□□□□ -0.48
LDB3-208ENST00000623007 HIVEP2P31629 2446 aa12.07□□□□□ -0.48
LDB3-208ENST00000623007 INAFM1C9JVW0 142 aa12.06□□□□□ -0.48
LDB3-208ENST00000623007 SAP30O75446 220 aa12.06□□□□□ -0.48
LDB3-208ENST00000623007 CRLF1O75462 422 aa12.06□□□□□ -0.48
LDB3-208ENST00000623007 ATP5LO75964 103 aa12.06□□□□□ -0.48
LDB3-208ENST00000623007 SUMO2P61956 95 aaKnown RBP12.06□□□□□ -0.48
LDB3-208ENST00000623007 LAGE3Q14657 143 aa12.06□□□□□ -0.48
LDB3-208ENST00000623007 LBHQ53QV2 105 aaPredicted RBP12.06□□□□□ -0.48
LDB3-208ENST00000623007 ZNF705AQ6ZN79 300 aaPredicted RBP12.06□□□□□ -0.48
LDB3-208ENST00000623007 SMIM2Q9BVW6 85 aa12.06□□□□□ -0.48
LDB3-208ENST00000623007 ADARB2-AS1A8MUL3 147 aa12.06□□□□□ -0.48
LDB3-208ENST00000623007 ZNF415Q09FC8 603 aa12.06□□□□□ -0.48
LDB3-208ENST00000623007 LINC01545Q5VT33 79 aa12.06□□□□□ -0.48
LDB3-208ENST00000623007 PAM16Q9Y3D7 125 aa12.06□□□□□ -0.48
LDB3-208ENST00000623007 KIF25-AS1Q9Y6Z4 181 aa12.06□□□□□ -0.48
LDB3-208ENST00000623007 IGLV2-18A0A075B6J9 118 aa12.05□□□□□ -0.48
LDB3-208ENST00000623007 TCAPO15273 167 aa12.05□□□□□ -0.48
LDB3-208ENST00000623007 MGPP08493 103 aa12.05□□□□□ -0.48
LDB3-208ENST00000623007 INSL3P51460 131 aa12.05□□□□□ -0.48
LDB3-208ENST00000623007 ODF3L2Q3SX64 289 aa12.05□□□□□ -0.48
LDB3-208ENST00000623007 MIEN1Q9BRT3 115 aa12.05□□□□□ -0.48
LDB3-208ENST00000623007 SPXQ9BT56 116 aa12.05□□□□□ -0.48
LDB3-208ENST00000623007 TLN2Q9Y4G6 2542 aa12.05□□□□□ -0.48
LDB3-208ENST00000623007 H7C1H1 209 aa12.04□□□□□ -0.48
LDB3-208ENST00000623007 PF4P02776 101 aa12.04□□□□□ -0.48
LDB3-208ENST00000623007 LGALS9BQ3B8N2 356 aa12.04□□□□□ -0.48
LDB3-208ENST00000623007 SPATA45Q537H7 98 aa12.04□□□□□ -0.48
LDB3-208ENST00000623007 LGALS9CQ6DKI2 356 aa12.04□□□□□ -0.48
LDB3-208ENST00000623007 IFI27L1Q96BM0 104 aa12.04□□□□□ -0.48
LDB3-208ENST00000623007 A0A096LNJ9 63 aa12.03□□□□□ -0.48
LDB3-208ENST00000623007 NSUN5P1Q3KNT7 163 aa12.03□□□□□ -0.48
LDB3-208ENST00000623007 C1QTNF4Q9BXJ3 329 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms