RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 PRSS3P2Q8NHM4 247 aa16.02■□□□□ 0.16
LIME1-210ENST00000621325 RNF185Q96GF1 192 aa16.02■□□□□ 0.16
LIME1-210ENST00000621325 TIMM8BQ9Y5J9 83 aaPredicted RBP16.02■□□□□ 0.16
LIME1-210ENST00000621325 J3QKU1 62 aa16.02■□□□□ 0.15
LIME1-210ENST00000621325 LEPROTL1O95214 131 aa16.01■□□□□ 0.15
LIME1-210ENST00000621325 ST20Q9HBF5 79 aa16.01■□□□□ 0.15
LIME1-210ENST00000621325 AP5S1Q9NUS5 200 aa16.01■□□□□ 0.15
LIME1-210ENST00000621325 PDZD2O15018 2839 aa16.01■□□□□ 0.15
LIME1-210ENST00000621325 OR4C46A6NHA9 309 aa16■□□□□ 0.15
LIME1-210ENST00000621325 K7EP34 96 aa16■□□□□ 0.15
LIME1-210ENST00000621325 CKS2P33552 79 aa16■□□□□ 0.15
LIME1-210ENST00000621325 FAM19A4Q96LR4 140 aa16■□□□□ 0.15
LIME1-210ENST00000621325 UBE2E2Q96LR5 201 aa16■□□□□ 0.15
LIME1-210ENST00000621325 SIGLEC8Q9NYZ4 499 aa16■□□□□ 0.15
LIME1-210ENST00000621325 TEX48A0A1B0GUV7 120 aa16■□□□□ 0.15
LIME1-210ENST00000621325 NPYP01303 97 aa16■□□□□ 0.15
LIME1-210ENST00000621325 HOXD3P31249 432 aaPredicted RBP16■□□□□ 0.15
LIME1-210ENST00000621325 RPL24P83731 157 aaKnown RBP16■□□□□ 0.15
LIME1-210ENST00000621325 HSD52Q0P140 79 aa16■□□□□ 0.15
LIME1-210ENST00000621325 ITPR2Q14571 2701 aa16■□□□□ 0.15
LIME1-210ENST00000621325 ACANP16112 2415 aa15.99■□□□□ 0.15
LIME1-210ENST00000621325 DEFB136Q30KP8 78 aa15.99■□□□□ 0.15
LIME1-210ENST00000621325 HIST2H2BDQ6DRA6 164 aa15.99■□□□□ 0.15
LIME1-210ENST00000621325 FA2HQ7L5A8 372 aa15.99■□□□□ 0.15
LIME1-210ENST00000621325 MS4A6AQ9H2W1 248 aa15.99■□□□□ 0.15
LIME1-210ENST00000621325 H3BUT2 72 aa15.99■□□□□ 0.15
LIME1-210ENST00000621325 SPRY2O43597 315 aa15.99■□□□□ 0.15
LIME1-210ENST00000621325 RNASE4P34096 147 aaKnown RBP15.99■□□□□ 0.15
LIME1-210ENST00000621325 Q8N2B8 174 aa15.99■□□□□ 0.15
LIME1-210ENST00000621325 RNF152Q8N8N0 203 aa15.99■□□□□ 0.15
LIME1-210ENST00000621325 TMEM70Q9BUB7 260 aa15.99■□□□□ 0.15
LIME1-210ENST00000621325 H3BVH4 76 aa15.98■□□□□ 0.15
LIME1-210ENST00000621325 TSSC4Q9Y5U2 329 aaPredicted RBP15.98■□□□□ 0.15
LIME1-210ENST00000621325 EVI2AP22794 236 aa15.98■□□□□ 0.15
LIME1-210ENST00000621325 ZNF479Q96JC4 524 aa15.98■□□□□ 0.15
LIME1-210ENST00000621325 ZNF688P0C7X2 276 aa15.97■□□□□ 0.15
LIME1-210ENST00000621325 SMIM17P0DL12 118 aa15.97■□□□□ 0.15
LIME1-210ENST00000621325 TRAV21A0A0B4J279 112 aa15.96■□□□□ 0.15
LIME1-210ENST00000621325 AP1S3Q96PC3 154 aa15.96■□□□□ 0.15
LIME1-210ENST00000621325 GAGE12HA6NDE8 117 aa15.96■□□□□ 0.15
LIME1-210ENST00000621325 SYS1-DBNDD2H3BUS1 97 aa15.96■□□□□ 0.15
LIME1-210ENST00000621325 GATA1P15976 413 aaPredicted RBP15.96■□□□□ 0.15
LIME1-210ENST00000621325 ID1P41134 155 aa15.96■□□□□ 0.15
LIME1-210ENST00000621325 FXYD7P58549 80 aa15.96■□□□□ 0.15
LIME1-210ENST00000621325 PET117Q6UWS5 81 aa15.96■□□□□ 0.15
LIME1-210ENST00000621325 MCRIP2Q9BUT9 160 aaKnown RBP15.96■□□□□ 0.15
LIME1-210ENST00000621325 SORL1Q92673 2214 aa15.96■□□□□ 0.14
LIME1-210ENST00000621325 A0A096LNJ9 63 aa15.95■□□□□ 0.14
LIME1-210ENST00000621325 C9orf118A6NHY6 69 aa15.95■□□□□ 0.14
LIME1-210ENST00000621325 OR5AL1P0C617 328 aa15.95■□□□□ 0.14
LIME1-210ENST00000621325 ANXA2RQ3ZCQ2 193 aa15.95■□□□□ 0.14
LIME1-210ENST00000621325 OR2K2Q8NGT1 345 aa15.95■□□□□ 0.14
LIME1-210ENST00000621325 GEMIN7Q9H840 131 aaKnown RBP15.95■□□□□ 0.14
LIME1-210ENST00000621325 SCRT2Q9NQ03 307 aa15.95■□□□□ 0.14
LIME1-210ENST00000621325 SNAI2O43623 268 aa15.95■□□□□ 0.14
LIME1-210ENST00000621325 TCTEX1D4Q5JR98 221 aa15.95■□□□□ 0.14
LIME1-210ENST00000621325 PSMG4Q5JS54 123 aa15.95■□□□□ 0.14
LIME1-210ENST00000621325 LGALS9O00182 355 aa15.94■□□□□ 0.14
LIME1-210ENST00000621325 SLURP1P55000 103 aa15.94■□□□□ 0.14
LIME1-210ENST00000621325 CRXO43186 299 aaPredicted RBP15.94■□□□□ 0.14
LIME1-210ENST00000621325 SPANXN1Q5VSR9 72 aa15.94■□□□□ 0.14
LIME1-210ENST00000621325 APRG1Q8IVJ8 170 aa15.94■□□□□ 0.14
LIME1-210ENST00000621325 DUX3Q96PT4 197 aa15.94■□□□□ 0.14
LIME1-210ENST00000621325 PGPEP1Q9NXJ5 209 aa15.94■□□□□ 0.14
LIME1-210ENST00000621325 H0Y8G0 127 aa15.93■□□□□ 0.14
LIME1-210ENST00000621325 ADAMTSL5Q6ZMM2 481 aa15.93■□□□□ 0.14
LIME1-210ENST00000621325 CUBNO60494 3623 aa15.93■□□□□ 0.14
LIME1-210ENST00000621325 CD300EQ496F6 205 aaPredicted RBP15.93■□□□□ 0.14
LIME1-210ENST00000621325 GNRH2O43555 120 aa15.92■□□□□ 0.14
LIME1-210ENST00000621325 UNC79Q9P2D8 2635 aa15.92■□□□□ 0.14
LIME1-210ENST00000621325 K7EQG2 157 aa15.92■□□□□ 0.14
LIME1-210ENST00000621325 KRTAP1-1Q07627 177 aa15.92■□□□□ 0.14
LIME1-210ENST00000621325 SS18L2Q9UHA2 77 aa15.92■□□□□ 0.14
LIME1-210ENST00000621325 NF1P21359 2839 aa15.91■□□□□ 0.14
LIME1-210ENST00000621325 AKAP9Q99996 3911 aa15.91■□□□□ 0.14
LIME1-210ENST00000621325 IGHV4-4A0A075B6R2 117 aa15.91■□□□□ 0.14
LIME1-210ENST00000621325 TRAV26-2A0A0B4J265 109 aa15.91■□□□□ 0.14
LIME1-210ENST00000621325 DNAJC9-AS1A6NH13 148 aa15.91■□□□□ 0.14
LIME1-210ENST00000621325 C2orf91Q6ZV80 131 aa15.91■□□□□ 0.14
LIME1-210ENST00000621325 ZNF747Q9BV97 191 aa15.91■□□□□ 0.14
LIME1-210ENST00000621325 HSPB8Q9UJY1 196 aa15.91■□□□□ 0.14
LIME1-210ENST00000621325 TNFRSF6BO95407 300 aa15.9■□□□□ 0.14
LIME1-210ENST00000621325 IGKV3-20P01619 116 aa15.9■□□□□ 0.14
LIME1-210ENST00000621325 KHDC1LQ5JSQ8 128 aa15.9■□□□□ 0.14
LIME1-210ENST00000621325 MAP1LC3CQ9BXW4 147 aa15.9■□□□□ 0.14
LIME1-210ENST00000621325 AGRNO00468 2067 aa15.9■□□□□ 0.14
LIME1-210ENST00000621325 TRBV7-9A0A0J9YWB2 115 aa15.9■□□□□ 0.14
LIME1-210ENST00000621325 KLLNB2CW77 178 aa15.9■□□□□ 0.14
LIME1-210ENST00000621325 Q6ZSV7 163 aa15.9■□□□□ 0.14
LIME1-210ENST00000621325 M0R381 172 aa15.89■□□□□ 0.13
LIME1-210ENST00000621325 S100A4P26447 101 aaKnown RBP15.89■□□□□ 0.13
LIME1-210ENST00000621325 RAB37Q96AX2 223 aa15.89■□□□□ 0.13
LIME1-210ENST00000621325 MRAP2Q96G30 205 aa15.89■□□□□ 0.13
LIME1-210ENST00000621325 PMCHL2Q9BQD1 86 aa15.89■□□□□ 0.13
LIME1-210ENST00000621325 ESM1Q9NQ30 184 aa15.89■□□□□ 0.13
LIME1-210ENST00000621325 SPCS1Q9Y6A9 102 aa15.89■□□□□ 0.13
LIME1-210ENST00000621325 ASIPP42127 132 aa15.89■□□□□ 0.13
LIME1-210ENST00000621325 CACNG7P62955 275 aa15.89■□□□□ 0.13
LIME1-210ENST00000621325 TMEM97Q5BJF2 176 aa15.89■□□□□ 0.13
LIME1-210ENST00000621325 OR11H1Q8NG94 326 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms