RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 ROS1P08922 2347 aa7.78□□□□□ -1.16
COL4A6-210ENST00000621266 H0YGX0 51 aa7.78□□□□□ -1.16
COL4A6-210ENST00000621266 RPL18AQ02543 176 aaKnown RBP7.78□□□□□ -1.16
COL4A6-210ENST00000621266 TSC2P49815 1807 aa7.78□□□□□ -1.16
COL4A6-210ENST00000621266 C22orf46C9J442 243 aa7.78□□□□□ -1.16
COL4A6-210ENST00000621266 LECT2O14960 151 aa7.78□□□□□ -1.16
COL4A6-210ENST00000621266 C10orf105Q8TEF2 133 aa7.78□□□□□ -1.16
COL4A6-210ENST00000621266 RNF166Q96A37 237 aaPredicted RBP7.78□□□□□ -1.16
COL4A6-210ENST00000621266 KIAA2026Q5HYC2 2103 aa7.77□□□□□ -1.17
COL4A6-210ENST00000621266 RHOHQ15669 191 aa7.77□□□□□ -1.17
COL4A6-210ENST00000621266 PTPRDP23468 1912 aa7.77□□□□□ -1.17
COL4A6-210ENST00000621266 PLXND1Q9Y4D7 1925 aa7.77□□□□□ -1.17
COL4A6-210ENST00000621266 SDIM1Q6ZPB5 146 aa7.77□□□□□ -1.17
COL4A6-210ENST00000621266 UPK3BQ9BT76 320 aa7.77□□□□□ -1.17
COL4A6-210ENST00000621266 Q9HAA7 133 aa7.77□□□□□ -1.17
COL4A6-210ENST00000621266 E9PQ18 207 aa7.77□□□□□ -1.17
COL4A6-210ENST00000621266 NDUFC2-KCTD14E9PQ53 114 aa7.77□□□□□ -1.17
COL4A6-210ENST00000621266 TNRC6AQ8NDV7 1962 aaKnown RBP7.77□□□□□ -1.17
COL4A6-210ENST00000621266 SEC61GP60059 68 aa7.77□□□□□ -1.17
COL4A6-210ENST00000621266 WT1-ASQ06250 92 aa7.77□□□□□ -1.17
COL4A6-210ENST00000621266 OPRPNQ99935 248 aaPredicted RBP7.77□□□□□ -1.17
COL4A6-210ENST00000621266 KMT2EQ8IZD2 1858 aa7.77□□□□□ -1.17
COL4A6-210ENST00000621266 ETDCA0A1B0GVM5 59 aa7.77□□□□□ -1.17
COL4A6-210ENST00000621266 FER1L5A0AVI2 2057 aa7.76□□□□□ -1.17
COL4A6-210ENST00000621266 NBASA2RRP1 2371 aa7.76□□□□□ -1.17
COL4A6-210ENST00000621266 ETV2O00321 342 aaPredicted RBP7.76□□□□□ -1.17
COL4A6-210ENST00000621266 IGHV4OR15-8A0A075B7B6 117 aa7.76□□□□□ -1.17
COL4A6-210ENST00000621266 IGKV1OR2-108A0A075B7D4 117 aa7.76□□□□□ -1.17
COL4A6-210ENST00000621266 A0A087WW49 117 aa7.76□□□□□ -1.17
COL4A6-210ENST00000621266 A0A0J9YXV3 536 aa7.76□□□□□ -1.17
COL4A6-210ENST00000621266 TCL1BO95988 128 aa7.76□□□□□ -1.17
COL4A6-210ENST00000621266 ZNF833PQ6ZTB9 187 aa7.76□□□□□ -1.17
COL4A6-210ENST00000621266 MRPL53Q96EL3 112 aaKnown RBP7.76□□□□□ -1.17
COL4A6-210ENST00000621266 GRNP28799 593 aaKnown RBP7.76□□□□□ -1.17
COL4A6-210ENST00000621266 HIST2H2BCQ6DN03 193 aa7.76□□□□□ -1.17
COL4A6-210ENST00000621266 IGFL3Q6UXB1 125 aa7.76□□□□□ -1.17
COL4A6-210ENST00000621266 UQCRQO14949 82 aa7.76□□□□□ -1.17
COL4A6-210ENST00000621266 IGLC6P0CF74 106 aa7.76□□□□□ -1.17
COL4A6-210ENST00000621266 C3orf22Q8N5N4 141 aa7.76□□□□□ -1.17
COL4A6-210ENST00000621266 NDUFB1O75438 58 aa7.76□□□□□ -1.17
COL4A6-210ENST00000621266 FAM110AQ9BQ89 295 aa7.76□□□□□ -1.17
COL4A6-210ENST00000621266 POLEQ07864 2286 aa7.76□□□□□ -1.17
COL4A6-210ENST00000621266 BUB3O43684 328 aa7.75□□□□□ -1.17
COL4A6-210ENST00000621266 LOXL1Q08397 574 aaPredicted RBP7.75□□□□□ -1.17
COL4A6-210ENST00000621266 IGKV2D-26A0A0A0MRZ7 120 aa7.75□□□□□ -1.17
COL4A6-210ENST00000621266 A0A0J9YY99 117 aa7.75□□□□□ -1.17
COL4A6-210ENST00000621266 SPATA12Q7Z6I5 190 aa7.75□□□□□ -1.17
COL4A6-210ENST00000621266 TIMM17AQ99595 171 aa7.75□□□□□ -1.17
COL4A6-210ENST00000621266 HIGD1BQ9P298 99 aa7.75□□□□□ -1.17
COL4A6-210ENST00000621266 MYO7BQ6PIF6 2116 aa7.75□□□□□ -1.17
COL4A6-210ENST00000621266 ATP5G1P05496 136 aa7.75□□□□□ -1.17
COL4A6-210ENST00000621266 LINC01619G3V211 115 aa7.75□□□□□ -1.17
COL4A6-210ENST00000621266 MYLKQ15746 1914 aa7.75□□□□□ -1.17
COL4A6-210ENST00000621266 SPTAN1Q13813 2472 aaKnown RBP7.75□□□□□ -1.17
COL4A6-210ENST00000621266 IGKV2D-24A0A075B6R9 120 aa7.75□□□□□ -1.17
COL4A6-210ENST00000621266 WI2-2373I1.2A0A1W2PRP0 233 aa7.74□□□□□ -1.17
COL4A6-210ENST00000621266 DEFB113Q30KQ7 82 aa7.74□□□□□ -1.17
COL4A6-210ENST00000621266 LINC00643Q86TS7 51 aa7.74□□□□□ -1.17
COL4A6-210ENST00000621266 MSRB1Q9NZV6 116 aa7.74□□□□□ -1.17
COL4A6-210ENST00000621266 HEATR5AQ86XA9 2040 aa7.74□□□□□ -1.17
COL4A6-210ENST00000621266 WT1P19544 449 aaPredicted RBP7.74□□□□□ -1.17
COL4A6-210ENST00000621266 FHL1Q13642 323 aa7.74□□□□□ -1.17
COL4A6-210ENST00000621266 C17orf58Q2M2W7 97 aa7.74□□□□□ -1.17
COL4A6-210ENST00000621266 RPL39P62891 51 aaKnown RBP7.74□□□□□ -1.17
COL4A6-210ENST00000621266 HIGD2BQ4VC39 106 aa7.74□□□□□ -1.17
COL4A6-210ENST00000621266 NOP10Q9NPE3 64 aaKnown RBP7.74□□□□□ -1.17
COL4A6-210ENST00000621266 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.74□□□□□ -1.17
COL4A6-210ENST00000621266 C1orf195Q5TG92 126 aa7.74□□□□□ -1.17
COL4A6-210ENST00000621266 DOCK10Q96BY6 2186 aa7.74□□□□□ -1.17
COL4A6-210ENST00000621266 IGLV10-54A0A075B6I4 117 aa7.74□□□□□ -1.17
COL4A6-210ENST00000621266 TEX49A0A1B0GTD5 131 aa7.73□□□□□ -1.17
COL4A6-210ENST00000621266 JMJD7-PLA2G4BH0Y9G9 81 aa7.73□□□□□ -1.17
COL4A6-210ENST00000621266 H3BT86 120 aa7.73□□□□□ -1.17
COL4A6-210ENST00000621266 DIAPH2-AS1Q14236 149 aa7.73□□□□□ -1.17
COL4A6-210ENST00000621266 Q6ZR03 302 aa7.73□□□□□ -1.17
COL4A6-210ENST00000621266 ARFGEF3Q5TH69 2177 aa7.73□□□□□ -1.17
COL4A6-210ENST00000621266 PRR20EP86478 221 aa7.73□□□□□ -1.17
COL4A6-210ENST00000621266 PRR20CP86479 221 aa7.73□□□□□ -1.17
COL4A6-210ENST00000621266 PRR20DP86480 221 aa7.73□□□□□ -1.17
COL4A6-210ENST00000621266 PRR20BP86481 221 aa7.73□□□□□ -1.17
COL4A6-210ENST00000621266 PRR20AP86496 221 aa7.73□□□□□ -1.17
COL4A6-210ENST00000621266 Q8N1Y9 231 aa7.73□□□□□ -1.17
COL4A6-210ENST00000621266 NDUFA4O00483 81 aa7.73□□□□□ -1.17
COL4A6-210ENST00000621266 C9orf47Q6ZRZ4 202 aa7.73□□□□□ -1.17
COL4A6-210ENST00000621266 DOCK8Q8NF50 2099 aa7.72□□□□□ -1.17
COL4A6-210ENST00000621266 PROK2Q9HC23 129 aa7.72□□□□□ -1.17
COL4A6-210ENST00000621266 C1orf147Q96MC9 270 aaPredicted RBP7.72□□□□□ -1.17
COL4A6-210ENST00000621266 CLUHP3Q96NS8 147 aa7.72□□□□□ -1.17
COL4A6-210ENST00000621266 AGPAT4-IT1Q9H0P7 198 aa7.72□□□□□ -1.17
COL4A6-210ENST00000621266 COL4A4P53420 1690 aaPredicted RBP7.72□□□□□ -1.17
COL4A6-210ENST00000621266 IGHV1-69DA0A0B4J2H0 117 aa7.72□□□□□ -1.17
COL4A6-210ENST00000621266 ZMAT4Q9H898 229 aa7.72□□□□□ -1.17
COL4A6-210ENST00000621266 PLA2G2EQ9NZK7 142 aa7.72□□□□□ -1.17
COL4A6-210ENST00000621266 NUP210Q8TEM1 1887 aaPredicted RBP7.71□□□□□ -1.17
COL4A6-210ENST00000621266 FRMD6-AS1P0C7T7 363 aa7.71□□□□□ -1.17
COL4A6-210ENST00000621266 ABCA4P78363 2273 aa7.71□□□□□ -1.17
COL4A6-210ENST00000621266 PHF3Q92576 2039 aaKnown RBP7.71□□□□□ -1.17
COL4A6-210ENST00000621266 H0Y9J4 135 aa7.71□□□□□ -1.17
COL4A6-210ENST00000621266 NDUFA11Q86Y39 141 aa7.71□□□□□ -1.17
COL4A6-210ENST00000621266 ZNF491Q8N8L2 437 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms