RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 CRYGDP07320 174 aa14.78□□□□□ -0.04
PDLIM3-212ENST00000620787 C19orf54Q5BKX5 351 aa14.78□□□□□ -0.04
PDLIM3-212ENST00000620787 SCGB1D4Q6XE38 83 aa14.78□□□□□ -0.04
PDLIM3-212ENST00000620787 ATP6V0BQ99437 205 aa14.78□□□□□ -0.04
PDLIM3-212ENST00000620787 MUC4Q99102 2169 aa14.78□□□□□ -0.04
PDLIM3-212ENST00000620787 DUSP14O95147 198 aaKnown RBP14.78□□□□□ -0.04
PDLIM3-212ENST00000620787 UNQ9165/PRO28630Q6UXU0 137 aa14.78□□□□□ -0.04
PDLIM3-212ENST00000620787 DLX4Q92988 240 aaPredicted RBP14.78□□□□□ -0.04
PDLIM3-212ENST00000620787 FAM19A4Q96LR4 140 aa14.78□□□□□ -0.04
PDLIM3-212ENST00000620787 TSPAN13O95857 204 aa14.77□□□□□ -0.04
PDLIM3-212ENST00000620787 RNASE3P12724 160 aaKnown RBP14.77□□□□□ -0.04
PDLIM3-212ENST00000620787 C1QTNF4Q9BXJ3 329 aa14.77□□□□□ -0.04
PDLIM3-212ENST00000620787 PTPRQQ9UMZ3 2332 aa14.77□□□□□ -0.04
PDLIM3-212ENST00000620787 TRAV41A0A0B4J266 112 aa14.77□□□□□ -0.05
PDLIM3-212ENST00000620787 FAM223BA6NKX1 122 aa14.77□□□□□ -0.05
PDLIM3-212ENST00000620787 GNRH2O43555 120 aa14.77□□□□□ -0.05
PDLIM3-212ENST00000620787 TSHBP01222 138 aa14.77□□□□□ -0.05
PDLIM3-212ENST00000620787 ARL3P36405 182 aa14.77□□□□□ -0.05
PDLIM3-212ENST00000620787 FOXI1Q12951 378 aa14.77□□□□□ -0.05
PDLIM3-212ENST00000620787 FAM223AQ8IWN6 122 aa14.77□□□□□ -0.05
PDLIM3-212ENST00000620787 POM121L12Q8N7R1 296 aa14.77□□□□□ -0.05
PDLIM3-212ENST00000620787 KLHL30-AS1Q8NEE0 82 aa14.77□□□□□ -0.05
PDLIM3-212ENST00000620787 ATP6V0E2Q8NHE4 81 aa14.77□□□□□ -0.05
PDLIM3-212ENST00000620787 LINC00527Q9UJ94 153 aa14.77□□□□□ -0.05
PDLIM3-212ENST00000620787 IGLV4-69A0A075B6H9 119 aa14.76□□□□□ -0.05
PDLIM3-212ENST00000620787 CD7P09564 240 aa14.76□□□□□ -0.05
PDLIM3-212ENST00000620787 RNASE4P34096 147 aaKnown RBP14.76□□□□□ -0.05
PDLIM3-212ENST00000620787 TMEM219Q86XT9 240 aa14.76□□□□□ -0.05
PDLIM3-212ENST00000620787 A0A1W2PPR1 153 aa14.76□□□□□ -0.05
PDLIM3-212ENST00000620787 C11orf86A6NJI1 115 aa14.76□□□□□ -0.05
PDLIM3-212ENST00000620787 NPFFO15130 113 aa14.76□□□□□ -0.05
PDLIM3-212ENST00000620787 TRBV12-3P01733 135 aa14.76□□□□□ -0.05
PDLIM3-212ENST00000620787 SRSF9Q13242 221 aaKnown RBP eCLIP14.76□□□□□ -0.05
PDLIM3-212ENST00000620787 PPP1R17O96001 155 aa14.75□□□□□ -0.05
PDLIM3-212ENST00000620787 APRG1Q8IVJ8 170 aa14.75□□□□□ -0.05
PDLIM3-212ENST00000620787 A0A1B0GV72 72 aa14.75□□□□□ -0.05
PDLIM3-212ENST00000620787 NXPH4O95158 308 aa14.75□□□□□ -0.05
PDLIM3-212ENST00000620787 UBE2D3P61077 147 aa14.75□□□□□ -0.05
PDLIM3-212ENST00000620787 UBE2D2P62837 147 aa14.75□□□□□ -0.05
PDLIM3-212ENST00000620787 F6UB75 175 aa14.74□□□□□ -0.05
PDLIM3-212ENST00000620787 LINC00315P59091 139 aa14.74□□□□□ -0.05
PDLIM3-212ENST00000620787 KIF25-AS1Q9Y6Z4 181 aa14.74□□□□□ -0.05
PDLIM3-212ENST00000620787 ZFP2Q6ZN57 461 aa14.74□□□□□ -0.05
PDLIM3-212ENST00000620787 NFE4Q86UQ8 179 aa14.74□□□□□ -0.05
PDLIM3-212ENST00000620787 IGHV1-69DA0A0B4J2H0 117 aa14.73□□□□□ -0.05
PDLIM3-212ENST00000620787 PSMB2P49721 201 aa14.73□□□□□ -0.05
PDLIM3-212ENST00000620787 SFTA2Q6UW10 78 aa14.73□□□□□ -0.05
PDLIM3-212ENST00000620787 TP53TG1Q9Y2A0 90 aa14.73□□□□□ -0.05
PDLIM3-212ENST00000620787 MUC6Q6W4X9 2439 aa14.73□□□□□ -0.05
PDLIM3-212ENST00000620787 LOC107984156A0A0G2JMH3 177 aa14.73□□□□□ -0.05
PDLIM3-212ENST00000620787 A0A0J9YY99 117 aa14.73□□□□□ -0.05
PDLIM3-212ENST00000620787 IGIPA6NJ69 53 aa14.73□□□□□ -0.05
PDLIM3-212ENST00000620787 NDUFA4O00483 81 aa14.73□□□□□ -0.05
PDLIM3-212ENST00000620787 CRIP2P52943 208 aaPredicted RBP14.73□□□□□ -0.05
PDLIM3-212ENST00000620787 RPL32P62910 135 aaKnown RBP14.73□□□□□ -0.05
PDLIM3-212ENST00000620787 ARL17AQ8IVW1 177 aa14.73□□□□□ -0.05
PDLIM3-212ENST00000620787 MOB4Q9Y3A3 225 aa14.73□□□□□ -0.05
PDLIM3-212ENST00000620787 EMP1P54849 157 aa14.72□□□□□ -0.05
PDLIM3-212ENST00000620787 CDIP1Q9H305 208 aa14.72□□□□□ -0.05
PDLIM3-212ENST00000620787 CEP295Q9C0D2 2601 aa14.72□□□□□ -0.05
PDLIM3-212ENST00000620787 ZFHX3Q15911 3703 aa14.72□□□□□ -0.05
PDLIM3-212ENST00000620787 IGHV4OR15-8A0A075B7B6 117 aa14.71□□□□□ -0.05
PDLIM3-212ENST00000620787 A0A087WW49 117 aa14.71□□□□□ -0.05
PDLIM3-212ENST00000620787 LMO4P61968 165 aa14.71□□□□□ -0.05
PDLIM3-212ENST00000620787 TCTEX1D4Q5JR98 221 aa14.71□□□□□ -0.05
PDLIM3-212ENST00000620787 NDUFA11Q86Y39 141 aa14.71□□□□□ -0.05
PDLIM3-212ENST00000620787 SYT8Q8NBV8 401 aa14.71□□□□□ -0.05
PDLIM3-212ENST00000620787 HERVK_113P61574 105 aa14.7□□□□□ -0.06
PDLIM3-212ENST00000620787 PAPPA-AS1Q5QFB9 102 aa14.7□□□□□ -0.06
PDLIM3-212ENST00000620787 SPTA1P02549 2419 aa14.7□□□□□ -0.06
PDLIM3-212ENST00000620787 POLR2KP53803 58 aaKnown RBP14.7□□□□□ -0.06
PDLIM3-212ENST00000620787 TSPEAR-AS2P59090 65 aa14.7□□□□□ -0.06
PDLIM3-212ENST00000620787 FOXC1Q12948 553 aa14.7□□□□□ -0.06
PDLIM3-212ENST00000620787 PMVKQ15126 192 aa14.7□□□□□ -0.06
PDLIM3-212ENST00000620787 RPL39P62891 51 aaKnown RBP14.69□□□□□ -0.06
PDLIM3-212ENST00000620787 DEFB104AQ8WTQ1 72 aa14.69□□□□□ -0.06
PDLIM3-212ENST00000620787 PTPRZ1P23471 2315 aaPredicted RBP14.69□□□□□ -0.06
PDLIM3-212ENST00000620787 TRBV7-9A0A0J9YWB2 115 aa14.69□□□□□ -0.06
PDLIM3-212ENST00000620787 FHL3Q13643 280 aa14.69□□□□□ -0.06
PDLIM3-212ENST00000620787 Q6ZS46 218 aa14.69□□□□□ -0.06
PDLIM3-212ENST00000620787 ZNF418Q8TF45 676 aaPredicted RBP14.69□□□□□ -0.06
PDLIM3-212ENST00000620787 NBASA2RRP1 2371 aa14.69□□□□□ -0.06
PDLIM3-212ENST00000620787 SUMO4Q6EEV6 95 aa14.68□□□□□ -0.06
PDLIM3-212ENST00000620787 PTH2Q96A98 100 aa14.68□□□□□ -0.06
PDLIM3-212ENST00000620787 JPT2Q9H910 190 aa14.68□□□□□ -0.06
PDLIM3-212ENST00000620787 IGHV3-30P01768 117 aa14.68□□□□□ -0.06
PDLIM3-212ENST00000620787 IGHV3-30-5P0DP03 117 aa14.68□□□□□ -0.06
PDLIM3-212ENST00000620787 NBL1P41271 181 aa14.68□□□□□ -0.06
PDLIM3-212ENST00000620787 CKS1BP61024 79 aa14.68□□□□□ -0.06
PDLIM3-212ENST00000620787 RPL11P62913 178 aaKnown RBP14.68□□□□□ -0.06
PDLIM3-212ENST00000620787 BPESC1Q9GZL8 116 aa14.68□□□□□ -0.06
PDLIM3-212ENST00000620787 SPTBN1Q01082 2364 aaKnown RBP14.67□□□□□ -0.06
PDLIM3-212ENST00000620787 LYRM7Q5U5X0 104 aa14.67□□□□□ -0.06
PDLIM3-212ENST00000620787 TMEM141Q96I45 108 aa14.67□□□□□ -0.06
PDLIM3-212ENST00000620787 IGKV3-7A0A075B6H7 116 aa14.67□□□□□ -0.06
PDLIM3-212ENST00000620787 TCL1BO95988 128 aa14.67□□□□□ -0.06
PDLIM3-212ENST00000620787 CFC1BP0CG36 223 aa14.67□□□□□ -0.06
PDLIM3-212ENST00000620787 CFC1P0CG37 223 aa14.67□□□□□ -0.06
PDLIM3-212ENST00000620787 CARD19Q96LW7 228 aa14.67□□□□□ -0.06
PDLIM3-212ENST00000620787 TIMM17AQ99595 171 aa14.67□□□□□ -0.06
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