RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 CDKN1BP46527 198 aa11.58□□□□□ -0.56
CD40-207ENST00000620709 FOXA3P55318 350 aaPredicted RBP11.58□□□□□ -0.56
CD40-207ENST00000620709 COX19Q49B96 90 aa11.58□□□□□ -0.56
CD40-207ENST00000620709 AMTNQ6UX39 209 aa11.58□□□□□ -0.56
CD40-207ENST00000620709 CSNK1G2-AS1Q8NCQ2 148 aa11.58□□□□□ -0.56
CD40-207ENST00000620709 C1QTNF4Q9BXJ3 329 aa11.58□□□□□ -0.56
CD40-207ENST00000620709 TRAV10A0A0B4J240 114 aa11.57□□□□□ -0.56
CD40-207ENST00000620709 C1orf196B1AJZ1 125 aa11.57□□□□□ -0.56
CD40-207ENST00000620709 SPINK4O60575 86 aa11.57□□□□□ -0.56
CD40-207ENST00000620709 MRPL54Q6P161 138 aaKnown RBP11.57□□□□□ -0.56
CD40-207ENST00000620709 ATP5L2Q7Z4Y8 100 aa11.57□□□□□ -0.56
CD40-207ENST00000620709 PGLYRP4Q96LB8 373 aa11.57□□□□□ -0.56
CD40-207ENST00000620709 APLNQ9ULZ1 77 aa11.57□□□□□ -0.56
CD40-207ENST00000620709 DNAH6Q9C0G6 4158 aa11.57□□□□□ -0.56
CD40-207ENST00000620709 IGHV3OR16-12A0A075B7B8 117 aa11.56□□□□□ -0.56
CD40-207ENST00000620709 C7orf71A4D174 169 aa11.56□□□□□ -0.56
CD40-207ENST00000620709 TCTAP57738 103 aa11.56□□□□□ -0.56
CD40-207ENST00000620709 KIR3DS1Q14943 382 aa11.56□□□□□ -0.56
CD40-207ENST00000620709 RASL11AQ6T310 242 aa11.56□□□□□ -0.56
CD40-207ENST00000620709 CLUHP3Q96NS8 147 aa11.56□□□□□ -0.56
CD40-207ENST00000620709 C11orf21Q9P2W6 132 aa11.56□□□□□ -0.56
CD40-207ENST00000620709 CELA1Q9UNI1 258 aa11.56□□□□□ -0.56
CD40-207ENST00000620709 IGKV3D-20A0A0C4DH25 116 aa11.55□□□□□ -0.56
CD40-207ENST00000620709 M0R2Z0 102 aa11.55□□□□□ -0.56
CD40-207ENST00000620709 EMP1P54849 157 aa11.55□□□□□ -0.56
CD40-207ENST00000620709 RAB5BP61020 215 aa11.55□□□□□ -0.56
CD40-207ENST00000620709 SPINK13Q1W4C9 94 aa11.55□□□□□ -0.56
CD40-207ENST00000620709 WDR73Q6P4I2 378 aa11.55□□□□□ -0.56
CD40-207ENST00000620709 BORCS7Q96B45 105 aa11.55□□□□□ -0.56
CD40-207ENST00000620709 NAGKQ9UJ70 344 aa11.55□□□□□ -0.56
CD40-207ENST00000620709 TRGC2P03986 189 aa11.55□□□□□ -0.56
CD40-207ENST00000620709 GFI1BQ5VTD9 330 aa11.55□□□□□ -0.56
CD40-207ENST00000620709 Q6ZQT7 251 aa11.55□□□□□ -0.56
CD40-207ENST00000620709 FER1L6-AS1Q8NA97 138 aa11.55□□□□□ -0.56
CD40-207ENST00000620709 IGHV4-4A0A075B6R2 117 aa11.54□□□□□ -0.56
CD40-207ENST00000620709 MT-ND6P03923 174 aa11.54□□□□□ -0.56
CD40-207ENST00000620709 IGLC6P0CF74 106 aa11.54□□□□□ -0.56
CD40-207ENST00000620709 CTRLP40313 264 aa11.54□□□□□ -0.56
CD40-207ENST00000620709 HBBP68871 147 aa11.54□□□□□ -0.56
CD40-207ENST00000620709 TPPP3Q9BW30 176 aa11.54□□□□□ -0.56
CD40-207ENST00000620709 TRAPPC1Q9Y5R8 145 aa11.54□□□□□ -0.56
CD40-207ENST00000620709 TRAV12-2A0A075B6T6 113 aa11.53□□□□□ -0.56
CD40-207ENST00000620709 DEFB131BA0A096LNP1 70 aa11.53□□□□□ -0.56
CD40-207ENST00000620709 TRAV12-3A0A0B4J271 114 aa11.53□□□□□ -0.56
CD40-207ENST00000620709 A0A1B0GUT8 65 aa11.53□□□□□ -0.56
CD40-207ENST00000620709 A0A1B0GXF2 115 aa11.53□□□□□ -0.56
CD40-207ENST00000620709 GRIFINA4D1Z8 144 aa11.53□□□□□ -0.56
CD40-207ENST00000620709 SNURFLB1AK76 121 aa11.53□□□□□ -0.56
CD40-207ENST00000620709 LYZL1Q6UWQ5 148 aa11.53□□□□□ -0.56
CD40-207ENST00000620709 GNB1LQ9BYB4 327 aa11.53□□□□□ -0.56
CD40-207ENST00000620709 ZNF324O75467 553 aaPredicted RBP11.52□□□□□ -0.57
CD40-207ENST00000620709 HLA-DQA1P01909 254 aa11.52□□□□□ -0.57
CD40-207ENST00000620709 RAB4BP61018 213 aa11.52□□□□□ -0.57
CD40-207ENST00000620709 RIGQ13278 110 aa11.52□□□□□ -0.57
CD40-207ENST00000620709 C12orf74Q32Q52 190 aa11.52□□□□□ -0.57
CD40-207ENST00000620709 ANXA2RQ3ZCQ2 193 aa11.52□□□□□ -0.57
CD40-207ENST00000620709 MUC21Q5SSG8 566 aa11.52□□□□□ -0.57
CD40-207ENST00000620709 ZNF575Q86XF7 245 aa11.52□□□□□ -0.57
CD40-207ENST00000620709 KCNS1Q96KK3 526 aa11.52□□□□□ -0.57
CD40-207ENST00000620709 A0A1B0GW15 77 aa11.51□□□□□ -0.57
CD40-207ENST00000620709 F2Z2F3 143 aa11.51□□□□□ -0.57
CD40-207ENST00000620709 AMBPP02760 352 aa11.51□□□□□ -0.57
CD40-207ENST00000620709 S100A8P05109 93 aa11.51□□□□□ -0.57
CD40-207ENST00000620709 ARMS2P0C7Q2 107 aa11.51□□□□□ -0.57
CD40-207ENST00000620709 FAM159AQ6UWV7 190 aa11.51□□□□□ -0.57
CD40-207ENST00000620709 TMEM136Q6ZRR5 245 aa11.51□□□□□ -0.57
CD40-207ENST00000620709 ZFP82Q8N141 532 aa11.51□□□□□ -0.57
CD40-207ENST00000620709 FRZBQ92765 325 aa11.51□□□□□ -0.57
CD40-207ENST00000620709 ASIPP42127 132 aa11.5□□□□□ -0.57
CD40-207ENST00000620709 FABP9Q0Z7S8 132 aa11.5□□□□□ -0.57
CD40-207ENST00000620709 PHOX2AO14813 284 aa11.5□□□□□ -0.57
CD40-207ENST00000620709 CRXO43186 299 aaPredicted RBP11.5□□□□□ -0.57
CD40-207ENST00000620709 CAMPP49913 170 aa11.5□□□□□ -0.57
CD40-207ENST00000620709 TDRG1Q3Y452 100 aa11.5□□□□□ -0.57
CD40-207ENST00000620709 MRPL18Q9H0U6 180 aaKnown RBP11.5□□□□□ -0.57
CD40-207ENST00000620709 SNAI2O43623 268 aa11.49□□□□□ -0.57
CD40-207ENST00000620709 OR5AL1P0C617 328 aa11.49□□□□□ -0.57
CD40-207ENST00000620709 SPART-AS1P0CW21 52 aa11.49□□□□□ -0.57
CD40-207ENST00000620709 MED14OSP0DP75 135 aa11.49□□□□□ -0.57
CD40-207ENST00000620709 S100A4P26447 101 aaKnown RBP11.49□□□□□ -0.57
CD40-207ENST00000620709 DNLZQ5SXM8 178 aa11.49□□□□□ -0.57
CD40-207ENST00000620709 ZNF705AQ6ZN79 300 aaPredicted RBP11.49□□□□□ -0.57
CD40-207ENST00000620709 C20orf144Q9BQM9 153 aa11.49□□□□□ -0.57
CD40-207ENST00000620709 CNFNQ9BYD5 112 aa11.49□□□□□ -0.57
CD40-207ENST00000620709 GOLT1BQ9Y3E0 138 aa11.49□□□□□ -0.57
CD40-207ENST00000620709 IGHV1OR15-1A0A075B7D0 117 aa11.48□□□□□ -0.57
CD40-207ENST00000620709 H3BVH4 76 aa11.48□□□□□ -0.57
CD40-207ENST00000620709 INSP01308 110 aa11.48□□□□□ -0.57
CD40-207ENST00000620709 NDUFAF3Q9BU61 184 aa11.48□□□□□ -0.57
CD40-207ENST00000620709 SSBP4Q9BWG4 385 aaPredicted RBP11.48□□□□□ -0.57
CD40-207ENST00000620709 HECTD4Q9Y4D8 3996 aa11.47□□□□□ -0.57
CD40-207ENST00000620709 SMIM9A6NGZ8 99 aa11.47□□□□□ -0.57
CD40-207ENST00000620709 TRGC1P0CF51 173 aa11.47□□□□□ -0.57
CD40-207ENST00000620709 HTN3P15516 51 aa11.47□□□□□ -0.57
CD40-207ENST00000620709 GATD1Q8NB37 220 aa11.47□□□□□ -0.57
CD40-207ENST00000620709 TMEM208Q9BTX3 173 aa11.47□□□□□ -0.57
CD40-207ENST00000620709 HIST1H2BKO60814 126 aa11.46□□□□□ -0.57
CD40-207ENST00000620709 APCSP02743 223 aa11.46□□□□□ -0.57
CD40-207ENST00000620709 HIST1H2BJP06899 126 aa11.46□□□□□ -0.57
CD40-207ENST00000620709 HIST1H2BOP23527 126 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms