RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 VAMP8Q9BV40 100 aa9.43□□□□□ -0.9
TNFAIP3-209ENST00000619035 MAP6D1Q9H9H5 199 aa9.43□□□□□ -0.9
TNFAIP3-209ENST00000619035 AGRNO00468 2067 aa9.43□□□□□ -0.9
TNFAIP3-209ENST00000619035 KIR2DL5BA0A0G2JN68 375 aa9.43□□□□□ -0.9
TNFAIP3-209ENST00000619035 KIR2DL5BA0A0G2JPC4 375 aa9.43□□□□□ -0.9
TNFAIP3-209ENST00000619035 GATA1P15976 413 aaPredicted RBP9.43□□□□□ -0.9
TNFAIP3-209ENST00000619035 S100A4P26447 101 aaKnown RBP9.43□□□□□ -0.9
TNFAIP3-209ENST00000619035 CKS2P33552 79 aa9.43□□□□□ -0.9
TNFAIP3-209ENST00000619035 KIR2DL5AQ8N109 375 aa9.43□□□□□ -0.9
TNFAIP3-209ENST00000619035 PRSS3P2Q8NHM4 247 aa9.43□□□□□ -0.9
TNFAIP3-209ENST00000619035 BAHCC1Q9P281 2608 aa9.42□□□□□ -0.9
TNFAIP3-209ENST00000619035 NPYP01303 97 aa9.42□□□□□ -0.9
TNFAIP3-209ENST00000619035 PF4P02776 101 aa9.42□□□□□ -0.9
TNFAIP3-209ENST00000619035 EVI2AP22794 236 aa9.42□□□□□ -0.9
TNFAIP3-209ENST00000619035 CDKN1BP46527 198 aa9.42□□□□□ -0.9
TNFAIP3-209ENST00000619035 ORMDL3Q8N138 153 aa9.42□□□□□ -0.9
TNFAIP3-209ENST00000619035 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.42□□□□□ -0.9
TNFAIP3-209ENST00000619035 CNFNQ9BYD5 112 aa9.42□□□□□ -0.9
TNFAIP3-209ENST00000619035 U3KQK5 164 aa9.42□□□□□ -0.9
TNFAIP3-209ENST00000619035 C7orf71A4D174 169 aa9.42□□□□□ -0.9
TNFAIP3-209ENST00000619035 H0Y8G0 127 aa9.42□□□□□ -0.9
TNFAIP3-209ENST00000619035 GNRH2O43555 120 aa9.42□□□□□ -0.9
TNFAIP3-209ENST00000619035 BTF3P20290 206 aaKnown RBP9.42□□□□□ -0.9
TNFAIP3-209ENST00000619035 RAB4AP20338 218 aa9.42□□□□□ -0.9
TNFAIP3-209ENST00000619035 FAM159AQ6UWV7 190 aa9.42□□□□□ -0.9
TNFAIP3-209ENST00000619035 TMEM191AQ9H0A3 160 aa9.42□□□□□ -0.9
TNFAIP3-209ENST00000619035 ZNF256Q9Y2P7 627 aaPredicted RBP9.42□□□□□ -0.9
TNFAIP3-209ENST00000619035 LEPROTL1O95214 131 aa9.41□□□□□ -0.9
TNFAIP3-209ENST00000619035 TSPOP30536 169 aa9.41□□□□□ -0.9
TNFAIP3-209ENST00000619035 ASIPP42127 132 aa9.41□□□□□ -0.9
TNFAIP3-209ENST00000619035 SPANXN1Q5VSR9 72 aa9.41□□□□□ -0.9
TNFAIP3-209ENST00000619035 OR2K2Q8NGT1 345 aa9.41□□□□□ -0.9
TNFAIP3-209ENST00000619035 NIPBLQ6KC79 2804 aaeCLIP9.4□□□□□ -0.9
TNFAIP3-209ENST00000619035 HLA-DRB4P13762 266 aa9.4□□□□□ -0.9
TNFAIP3-209ENST00000619035 FA2HQ7L5A8 372 aa9.4□□□□□ -0.9
TNFAIP3-209ENST00000619035 AP5S1Q9NUS5 200 aa9.4□□□□□ -0.9
TNFAIP3-209ENST00000619035 HLA-DRB4X5D2U9 266 aa9.4□□□□□ -0.9
TNFAIP3-209ENST00000619035 H3BMM0 161 aa9.4□□□□□ -0.9
TNFAIP3-209ENST00000619035 CMC4P56277 68 aaPredicted RBP9.4□□□□□ -0.9
TNFAIP3-209ENST00000619035 AMTNQ6UX39 209 aa9.4□□□□□ -0.9
TNFAIP3-209ENST00000619035 TRAV26-2A0A0B4J265 109 aa9.39□□□□□ -0.91
TNFAIP3-209ENST00000619035 M0R381 172 aa9.39□□□□□ -0.91
TNFAIP3-209ENST00000619035 ODF3L2Q3SX64 289 aa9.39□□□□□ -0.91
TNFAIP3-209ENST00000619035 SPATA45Q537H7 98 aa9.39□□□□□ -0.91
TNFAIP3-209ENST00000619035 NDUFAF3Q9BU61 184 aa9.39□□□□□ -0.91
TNFAIP3-209ENST00000619035 CYSRT1A8MQ03 144 aa9.39□□□□□ -0.91
TNFAIP3-209ENST00000619035 CD7P09564 240 aa9.39□□□□□ -0.91
TNFAIP3-209ENST00000619035 OR5AL1P0C617 328 aa9.39□□□□□ -0.91
TNFAIP3-209ENST00000619035 TMEM70Q9BUB7 260 aa9.39□□□□□ -0.91
TNFAIP3-209ENST00000619035 JMJD1CQ15652 2540 aa9.38□□□□□ -0.91
TNFAIP3-209ENST00000619035 A0A096LNJ9 63 aa9.38□□□□□ -0.91
TNFAIP3-209ENST00000619035 A8MTW9 85 aa9.38□□□□□ -0.91
TNFAIP3-209ENST00000619035 SNAI2O43623 268 aa9.38□□□□□ -0.91
TNFAIP3-209ENST00000619035 ZNF705AQ6ZN79 300 aaPredicted RBP9.38□□□□□ -0.91
TNFAIP3-209ENST00000619035 PMCHL2Q9BQD1 86 aa9.38□□□□□ -0.91
TNFAIP3-209ENST00000619035 PHLDA3Q9Y5J5 127 aa9.38□□□□□ -0.91
TNFAIP3-209ENST00000619035 RBMY1BA6NDE4 496 aaKnown RBP9.38□□□□□ -0.91
TNFAIP3-209ENST00000619035 RBMY1EA6NEQ0 496 aaKnown RBP9.38□□□□□ -0.91
TNFAIP3-209ENST00000619035 SYS1-DBNDD2H3BUS1 97 aa9.38□□□□□ -0.91
TNFAIP3-209ENST00000619035 RBMY1DP0C7P1 496 aaKnown RBP9.38□□□□□ -0.91
TNFAIP3-209ENST00000619035 CLUHP3Q96NS8 147 aa9.38□□□□□ -0.91
TNFAIP3-209ENST00000619035 OR11H12B2RN74 326 aa9.37□□□□□ -0.91
TNFAIP3-209ENST00000619035 DMRTA1Q5VZB9 504 aa9.37□□□□□ -0.91
TNFAIP3-209ENST00000619035 C20orf144Q9BQM9 153 aa9.37□□□□□ -0.91
TNFAIP3-209ENST00000619035 EREGO14944 169 aa9.36□□□□□ -0.91
TNFAIP3-209ENST00000619035 IGLV1-51P01701 117 aa9.36□□□□□ -0.91
TNFAIP3-209ENST00000619035 RNASE3P12724 160 aaKnown RBP9.36□□□□□ -0.91
TNFAIP3-209ENST00000619035 HTN1P15515 57 aa9.36□□□□□ -0.91
TNFAIP3-209ENST00000619035 CACNG7P62955 275 aa9.36□□□□□ -0.91
TNFAIP3-209ENST00000619035 SMIM15Q7Z3B0 74 aa9.36□□□□□ -0.91
TNFAIP3-209ENST00000619035 CITED1Q99966 193 aa9.36□□□□□ -0.91
TNFAIP3-209ENST00000619035 FAM110AQ9BQ89 295 aa9.36□□□□□ -0.91
TNFAIP3-209ENST00000619035 TNFRSF6BO95407 300 aa9.36□□□□□ -0.91
TNFAIP3-209ENST00000619035 STHQ8IWL8 128 aa9.36□□□□□ -0.91
TNFAIP3-209ENST00000619035 LINC00482Q8N8I6 264 aa9.36□□□□□ -0.91
TNFAIP3-209ENST00000619035 IGHV1OR15-1A0A075B7D0 117 aa9.35□□□□□ -0.91
TNFAIP3-209ENST00000619035 CRXO43186 299 aaPredicted RBP9.35□□□□□ -0.91
TNFAIP3-209ENST00000619035 RBMY1A1P0DJD3 496 aaKnown RBP9.35□□□□□ -0.91
TNFAIP3-209ENST00000619035 RBMY1CP0DJD4 496 aa9.35□□□□□ -0.91
TNFAIP3-209ENST00000619035 MED14OSP0DP75 135 aa9.35□□□□□ -0.91
TNFAIP3-209ENST00000619035 RBMY1FQ15415 496 aaKnown RBP9.35□□□□□ -0.91
TNFAIP3-209ENST00000619035 Q8N1Y9 231 aa9.35□□□□□ -0.91
TNFAIP3-209ENST00000619035 MIEN1Q9BRT3 115 aa9.35□□□□□ -0.91
TNFAIP3-209ENST00000619035 MAP1LC3CQ9BXW4 147 aa9.35□□□□□ -0.91
TNFAIP3-209ENST00000619035 TP73-AS1Q9UF72 201 aa9.35□□□□□ -0.91
TNFAIP3-209ENST00000619035 TENM1Q9UKZ4 2725 aa9.35□□□□□ -0.91
TNFAIP3-209ENST00000619035 IGHV4-4A0A075B6R2 117 aa9.34□□□□□ -0.91
TNFAIP3-209ENST00000619035 INSL3P51460 131 aa9.34□□□□□ -0.91
TNFAIP3-209ENST00000619035 ZNF747Q9BV97 191 aa9.34□□□□□ -0.91
TNFAIP3-209ENST00000619035 WFDC10AQ9H1F0 79 aa9.34□□□□□ -0.91
TNFAIP3-209ENST00000619035 MDFICQ9P1T7 246 aa9.34□□□□□ -0.91
TNFAIP3-209ENST00000619035 MUC4Q99102 2169 aa9.34□□□□□ -0.91
TNFAIP3-209ENST00000619035 hDV102S1A0JD36 115 aa9.34□□□□□ -0.91
TNFAIP3-209ENST00000619035 IGLL1P15814 213 aa9.34□□□□□ -0.91
TNFAIP3-209ENST00000619035 C14orf178Q8N769 122 aaPredicted RBP9.34□□□□□ -0.91
TNFAIP3-209ENST00000619035 MAP1LC3AQ9H492 121 aa9.34□□□□□ -0.91
TNFAIP3-209ENST00000619035 SCRT2Q9NQ03 307 aa9.34□□□□□ -0.91
TNFAIP3-209ENST00000619035 HSPB8Q9UJY1 196 aa9.34□□□□□ -0.91
TNFAIP3-209ENST00000619035 CBY3A6NI87 242 aa9.33□□□□□ -0.92
TNFAIP3-209ENST00000619035 SNHG12Q9BXW3 62 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms