RNA–Protein interactions for RNA: ENST00000616579.4

TMPRSS4-219, Transcript of transmembrane serine protease 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TMPRSS4, Length 3,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS4-219ENST00000616579 NOTCH1P46531 2555 aa6.64□□□□□ -1.35
TMPRSS4-219ENST00000616579 STAB1Q9NY15 2570 aa6.64□□□□□ -1.35
TMPRSS4-219ENST00000616579 TGFAP01135 160 aa6.64□□□□□ -1.35
TMPRSS4-219ENST00000616579 LAGE3Q14657 143 aa6.64□□□□□ -1.35
TMPRSS4-219ENST00000616579 RNF185Q96GF1 192 aa6.64□□□□□ -1.35
TMPRSS4-219ENST00000616579 TMEM8BA6NDV4 472 aa6.64□□□□□ -1.35
TMPRSS4-219ENST00000616579 F5H697 171 aa6.64□□□□□ -1.35
TMPRSS4-219ENST00000616579 C19orf84I3L1E1 186 aa6.64□□□□□ -1.35
TMPRSS4-219ENST00000616579 OVOL3O00110 214 aa6.64□□□□□ -1.35
TMPRSS4-219ENST00000616579 FABP2P12104 132 aa6.64□□□□□ -1.35
TMPRSS4-219ENST00000616579 Q8N8P6 123 aa6.64□□□□□ -1.35
TMPRSS4-219ENST00000616579 SPCS1Q9Y6A9 102 aa6.64□□□□□ -1.35
TMPRSS4-219ENST00000616579 RBAKDNA6NC62 111 aa6.63□□□□□ -1.35
TMPRSS4-219ENST00000616579 SMIM13P0DJ93 91 aa6.63□□□□□ -1.35
TMPRSS4-219ENST00000616579 RNASE4P34096 147 aaKnown RBP6.63□□□□□ -1.35
TMPRSS4-219ENST00000616579 SRSF1Q07955 248 aaKnown RBP eCLIP6.63□□□□□ -1.35
TMPRSS4-219ENST00000616579 C9orf139Q6ZV77 190 aa6.63□□□□□ -1.35
TMPRSS4-219ENST00000616579 DPF1Q92782 380 aa6.63□□□□□ -1.35
TMPRSS4-219ENST00000616579 GEMIN7Q9H840 131 aaKnown RBP6.63□□□□□ -1.35
TMPRSS4-219ENST00000616579 UNC79Q9P2D8 2635 aa6.63□□□□□ -1.35
TMPRSS4-219ENST00000616579 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.63□□□□□ -1.35
TMPRSS4-219ENST00000616579 ASIPP42127 132 aa6.63□□□□□ -1.35
TMPRSS4-219ENST00000616579 LMO4P61968 165 aa6.63□□□□□ -1.35
TMPRSS4-219ENST00000616579 NHP2Q9NX24 153 aaKnown RBP6.63□□□□□ -1.35
TMPRSS4-219ENST00000616579 TRAV21A0A0B4J279 112 aa6.63□□□□□ -1.35
TMPRSS4-219ENST00000616579 C9orf118A6NHY6 69 aa6.63□□□□□ -1.35
TMPRSS4-219ENST00000616579 H3BRM9 83 aa6.63□□□□□ -1.35
TMPRSS4-219ENST00000616579 C14orf178Q8N769 122 aaPredicted RBP6.63□□□□□ -1.35
TMPRSS4-219ENST00000616579 C5orf56Q8N8D9 126 aa6.63□□□□□ -1.35
TMPRSS4-219ENST00000616579 SCGB3A1Q96QR1 104 aa6.63□□□□□ -1.35
TMPRSS4-219ENST00000616579 MRPL35Q9NZE8 188 aaKnown RBP6.63□□□□□ -1.35
TMPRSS4-219ENST00000616579 C11orf21Q9P2W6 132 aa6.63□□□□□ -1.35
TMPRSS4-219ENST00000616579 H3BUX3 64 aa6.62□□□□□ -1.35
TMPRSS4-219ENST00000616579 Q6ZQT7 251 aa6.62□□□□□ -1.35
TMPRSS4-219ENST00000616579 CLPSL1A2RUU4 121 aa6.62□□□□□ -1.35
TMPRSS4-219ENST00000616579 COX8CQ7Z4L0 72 aa6.62□□□□□ -1.35
TMPRSS4-219ENST00000616579 PIMREGQ9BSJ6 248 aa6.62□□□□□ -1.35
TMPRSS4-219ENST00000616579 NPFFR1Q9GZQ6 430 aa6.62□□□□□ -1.35
TMPRSS4-219ENST00000616579 TNFRSF18Q9Y5U5 241 aa6.62□□□□□ -1.35
TMPRSS4-219ENST00000616579 FGF6P10767 208 aa6.62□□□□□ -1.35
TMPRSS4-219ENST00000616579 PSMG4Q5JS54 123 aa6.62□□□□□ -1.35
TMPRSS4-219ENST00000616579 SMIM20Q8N5G0 67 aa6.62□□□□□ -1.35
TMPRSS4-219ENST00000616579 HIST1H4GQ99525 98 aa6.62□□□□□ -1.35
TMPRSS4-219ENST00000616579 CHAC1Q9BUX1 264 aa6.62□□□□□ -1.35
TMPRSS4-219ENST00000616579 SMPXQ9UHP9 88 aa6.62□□□□□ -1.35
TMPRSS4-219ENST00000616579 TRAV8-2A0A0B4J237 113 aa6.61□□□□□ -1.35
TMPRSS4-219ENST00000616579 FAM223BA6NKX1 122 aa6.61□□□□□ -1.35
TMPRSS4-219ENST00000616579 F6UB75 175 aa6.61□□□□□ -1.35
TMPRSS4-219ENST00000616579 TRBV12-3P01733 135 aa6.61□□□□□ -1.35
TMPRSS4-219ENST00000616579 IGF1P05019 195 aa6.61□□□□□ -1.35
TMPRSS4-219ENST00000616579 SRSF2Q01130 221 aaKnown RBP6.61□□□□□ -1.35
TMPRSS4-219ENST00000616579 FAM74A4Q5TZK3 123 aa6.61□□□□□ -1.35
TMPRSS4-219ENST00000616579 UNQ9165/PRO28630Q6UXU0 137 aa6.61□□□□□ -1.35
TMPRSS4-219ENST00000616579 FAM223AQ8IWN6 122 aa6.61□□□□□ -1.35
TMPRSS4-219ENST00000616579 LINC00477Q96M19 166 aa6.61□□□□□ -1.35
TMPRSS4-219ENST00000616579 COL6A5A8TX70 2615 aa6.61□□□□□ -1.35
TMPRSS4-219ENST00000616579 IGHV1-69DA0A0B4J2H0 117 aa6.61□□□□□ -1.35
TMPRSS4-219ENST00000616579 OR11H12B2RN74 326 aa6.61□□□□□ -1.35
TMPRSS4-219ENST00000616579 SIVA1O15304 175 aa6.61□□□□□ -1.35
TMPRSS4-219ENST00000616579 IGHV1-69P01742 117 aa6.61□□□□□ -1.35
TMPRSS4-219ENST00000616579 SAMD5Q5TGI4 173 aa6.61□□□□□ -1.35
TMPRSS4-219ENST00000616579 OR11H1Q8NG94 326 aa6.61□□□□□ -1.35
TMPRSS4-219ENST00000616579 OR11H2Q8NH07 326 aa6.61□□□□□ -1.35
TMPRSS4-219ENST00000616579 CITED2Q99967 270 aaPredicted RBP6.61□□□□□ -1.35
TMPRSS4-219ENST00000616579 IGKV2D-26A0A0A0MRZ7 120 aa6.6□□□□□ -1.35
TMPRSS4-219ENST00000616579 OVOL1O14753 267 aa6.6□□□□□ -1.35
TMPRSS4-219ENST00000616579 C9orf47Q6ZRZ4 202 aa6.6□□□□□ -1.35
TMPRSS4-219ENST00000616579 CNFNQ9BYD5 112 aa6.6□□□□□ -1.35
TMPRSS4-219ENST00000616579 SCGB1D4Q6XE38 83 aa6.6□□□□□ -1.35
TMPRSS4-219ENST00000616579 MRPL53Q96EL3 112 aaKnown RBP6.6□□□□□ -1.35
TMPRSS4-219ENST00000616579 CCL19Q99731 98 aa6.6□□□□□ -1.35
TMPRSS4-219ENST00000616579 ANXA2RQ3ZCQ2 193 aa6.6□□□□□ -1.35
TMPRSS4-219ENST00000616579 BBC3Q96PG8 261 aaPredicted RBP6.6□□□□□ -1.35
TMPRSS4-219ENST00000616579 SMIM2Q9BVW6 85 aa6.6□□□□□ -1.35
TMPRSS4-219ENST00000616579 RHPN1-AS1Q9BWJ2 59 aa6.6□□□□□ -1.35
TMPRSS4-219ENST00000616579 DPH3P1Q9H4G8 78 aa6.6□□□□□ -1.35
TMPRSS4-219ENST00000616579 MXRA5Q9NR99 2828 aa6.6□□□□□ -1.35
TMPRSS4-219ENST00000616579 TRBV25-1A0A075B6N4 114 aa6.59□□□□□ -1.35
TMPRSS4-219ENST00000616579 K7EMI3 77 aa6.59□□□□□ -1.35
TMPRSS4-219ENST00000616579 K7ERJ3 54 aa6.59□□□□□ -1.35
TMPRSS4-219ENST00000616579 IGHV4-39P01824 125 aa6.59□□□□□ -1.35
TMPRSS4-219ENST00000616579 FXYD2P54710 66 aa6.59□□□□□ -1.35
TMPRSS4-219ENST00000616579 SUMO2P61956 95 aaKnown RBP6.59□□□□□ -1.35
TMPRSS4-219ENST00000616579 ORMDL2Q53FV1 153 aa6.59□□□□□ -1.35
TMPRSS4-219ENST00000616579 SFTA2Q6UW10 78 aa6.59□□□□□ -1.35
TMPRSS4-219ENST00000616579 FAM159AQ6UWV7 190 aa6.59□□□□□ -1.35
TMPRSS4-219ENST00000616579 IGHV4-61A0A0C4DH41 118 aa6.59□□□□□ -1.35
TMPRSS4-219ENST00000616579 BLCAPP62952 87 aa6.59□□□□□ -1.35
TMPRSS4-219ENST00000616579 IGHV7-4-1A0A0J9YVY3 117 aa6.59□□□□□ -1.36
TMPRSS4-219ENST00000616579 NDUFA4O00483 81 aa6.59□□□□□ -1.36
TMPRSS4-219ENST00000616579 IGHV4-38-2P0DP08 117 aa6.59□□□□□ -1.36
TMPRSS4-219ENST00000616579 MRAP2Q96G30 205 aa6.59□□□□□ -1.36
TMPRSS4-219ENST00000616579 C20orf173Q96LM9 149 aa6.59□□□□□ -1.36
TMPRSS4-219ENST00000616579 A0A1W2PPM0 123 aa6.58□□□□□ -1.36
TMPRSS4-219ENST00000616579 G3V4G9 280 aa6.58□□□□□ -1.36
TMPRSS4-219ENST00000616579 K7EP34 96 aa6.58□□□□□ -1.36
TMPRSS4-219ENST00000616579 GNRH2O43555 120 aa6.58□□□□□ -1.36
TMPRSS4-219ENST00000616579 SRSF9Q13242 221 aaKnown RBP eCLIP6.58□□□□□ -1.36
TMPRSS4-219ENST00000616579 PRR9Q5T870 116 aa6.58□□□□□ -1.36
TMPRSS4-219ENST00000616579 ITLN2Q8WWU7 325 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms