RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 CTRLP40313 264 aa14.69□□□□□ -0.06
SPAST-203ENST00000615843 PTH2Q96A98 100 aa14.69□□□□□ -0.06
SPAST-203ENST00000615843 RIF1Q5UIP0 2472 aaKnown RBP14.69□□□□□ -0.06
SPAST-203ENST00000615843 BAALCQ8WXS3 180 aa14.69□□□□□ -0.06
SPAST-203ENST00000615843 RITA1Q96K30 269 aa14.69□□□□□ -0.06
SPAST-203ENST00000615843 PLA2G5P39877 138 aa14.69□□□□□ -0.06
SPAST-203ENST00000615843 FAM215AQ9Y5M1 114 aa14.69□□□□□ -0.06
SPAST-203ENST00000615843 MSMBP08118 114 aa14.68□□□□□ -0.06
SPAST-203ENST00000615843 DENND4CQ5VZ89 1909 aa14.68□□□□□ -0.06
SPAST-203ENST00000615843 ZNF561-AS1K7EIQ3 104 aa14.68□□□□□ -0.06
SPAST-203ENST00000615843 A0A1B0GX51 115 aa14.68□□□□□ -0.06
SPAST-203ENST00000615843 HERV-K104P63124 156 aa14.68□□□□□ -0.06
SPAST-203ENST00000615843 TOMM6Q96B49 74 aa14.68□□□□□ -0.06
SPAST-203ENST00000615843 ARHGAP21Q5T5U3 1957 aa14.68□□□□□ -0.06
SPAST-203ENST00000615843 RBX1P62877 108 aa14.68□□□□□ -0.06
SPAST-203ENST00000615843 SLC25A29Q8N8R3 303 aa14.68□□□□□ -0.06
SPAST-203ENST00000615843 TRBV10-2A0A0K0K1G8 114 aa14.67□□□□□ -0.06
SPAST-203ENST00000615843 CRYGCP07315 174 aa14.67□□□□□ -0.06
SPAST-203ENST00000615843 ZNF503Q96F45 646 aa14.67□□□□□ -0.06
SPAST-203ENST00000615843 LINC01356Q8N9X3 169 aa14.67□□□□□ -0.06
SPAST-203ENST00000615843 PRR30Q53SZ7 412 aaPredicted RBP14.66□□□□□ -0.06
SPAST-203ENST00000615843 C3orf56Q8N813 242 aa14.66□□□□□ -0.06
SPAST-203ENST00000615843 IGLV2-8P01709 118 aa14.66□□□□□ -0.06
SPAST-203ENST00000615843 PLXNB3Q9ULL4 1909 aa14.66□□□□□ -0.06
SPAST-203ENST00000615843 IGLV11-55A0A075B6I3 123 aa14.66□□□□□ -0.06
SPAST-203ENST00000615843 MRPL36Q9P0J6 103 aaKnown RBP14.66□□□□□ -0.06
SPAST-203ENST00000615843 IGKV3D-7A0A0C4DH55 119 aa14.66□□□□□ -0.06
SPAST-203ENST00000615843 TRBV6-1A0A0K0K1D8 114 aa14.66□□□□□ -0.06
SPAST-203ENST00000615843 LOXL1Q08397 574 aaPredicted RBP14.66□□□□□ -0.06
SPAST-203ENST00000615843 PRSS33Q8NF86 280 aa14.66□□□□□ -0.06
SPAST-203ENST00000615843 RPL39P62891 51 aaKnown RBP14.65□□□□□ -0.06
SPAST-203ENST00000615843 TICRRQ7Z2Z1 1910 aa14.65□□□□□ -0.06
SPAST-203ENST00000615843 CTSGP08311 255 aa14.65□□□□□ -0.06
SPAST-203ENST00000615843 GDF5OSQ5U4N7 250 aa14.65□□□□□ -0.06
SPAST-203ENST00000615843 IGFL3Q6UXB1 125 aa14.65□□□□□ -0.06
SPAST-203ENST00000615843 P0C879 139 aa14.65□□□□□ -0.06
SPAST-203ENST00000615843 TP73-AS1Q9UF72 201 aa14.65□□□□□ -0.06
SPAST-203ENST00000615843 PCNX1Q96RV3 2341 aa14.65□□□□□ -0.06
SPAST-203ENST00000615843 RNF183Q96D59 192 aa14.64□□□□□ -0.07
SPAST-203ENST00000615843 ZNF295-AS1Q8N0V1 137 aa14.64□□□□□ -0.07
SPAST-203ENST00000615843 COL4A3Q01955 1670 aa14.64□□□□□ -0.07
SPAST-203ENST00000615843 C11orf86A6NJI1 115 aa14.64□□□□□ -0.07
SPAST-203ENST00000615843 PRAC2D3DTV9 90 aa14.64□□□□□ -0.07
SPAST-203ENST00000615843 H3BT86 120 aa14.64□□□□□ -0.07
SPAST-203ENST00000615843 C1orf43Q9BWL3 253 aa14.64□□□□□ -0.07
SPAST-203ENST00000615843 MED13Q9UHV7 2174 aa14.64□□□□□ -0.07
SPAST-203ENST00000615843 Q6ZUT4 128 aa14.64□□□□□ -0.07
SPAST-203ENST00000615843 TNRC6AQ8NDV7 1962 aaKnown RBP14.64□□□□□ -0.07
SPAST-203ENST00000615843 WI2-2373I1.2A0A1W2PRP0 233 aa14.63□□□□□ -0.07
SPAST-203ENST00000615843 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.63□□□□□ -0.075e-6■■■■□ 22.8
SPAST-203ENST00000615843 MED13LQ71F56 2210 aa14.63□□□□□ -0.07
SPAST-203ENST00000615843 BUB3O43684 328 aa14.63□□□□□ -0.07
SPAST-203ENST00000615843 GNLYP22749 145 aa14.63□□□□□ -0.07
SPAST-203ENST00000615843 TP53TG3Q9ULZ0 132 aa14.63□□□□□ -0.07
SPAST-203ENST00000615843 GATA3P23771 443 aa14.63□□□□□ -0.07
SPAST-203ENST00000615843 PIFOQ8TCI5 191 aa14.63□□□□□ -0.07
SPAST-203ENST00000615843 H0YGX0 51 aa14.62□□□□□ -0.07
SPAST-203ENST00000615843 H3BUA1 57 aa14.62□□□□□ -0.07
SPAST-203ENST00000615843 HOXD3P31249 432 aaPredicted RBP14.62□□□□□ -0.07
SPAST-203ENST00000615843 NPBQ8NG41 125 aa14.62□□□□□ -0.07
SPAST-203ENST00000615843 E7EUB6 86 aa14.62□□□□□ -0.07
SPAST-203ENST00000615843 NKAPP1Q8N9T2 125 aa14.62□□□□□ -0.07
SPAST-203ENST00000615843 TIMM17AQ99595 171 aa14.62□□□□□ -0.07
SPAST-203ENST00000615843 IGLV2-23P01705 113 aa14.61□□□□□ -0.07
SPAST-203ENST00000615843 NDUFA11Q86Y39 141 aa14.61□□□□□ -0.07
SPAST-203ENST00000615843 IGFBPL1Q8WX77 278 aa14.61□□□□□ -0.07
SPAST-203ENST00000615843 LGALS9O00182 355 aa14.6□□□□□ -0.07
SPAST-203ENST00000615843 CLEC2BQ92478 149 aa14.6□□□□□ -0.07
SPAST-203ENST00000615843 U3KQE9 123 aa14.6□□□□□ -0.07
SPAST-203ENST00000615843 NOTCH4Q99466 2003 aa14.6□□□□□ -0.07
SPAST-203ENST00000615843 IGHV7-81A0A0B4J1V7 117 aa14.6□□□□□ -0.07
SPAST-203ENST00000615843 HOXB4P17483 251 aaPredicted RBP14.6□□□□□ -0.07
SPAST-203ENST00000615843 Q6ZPA2 131 aa14.6□□□□□ -0.07
SPAST-203ENST00000615843 TANC1Q9C0D5 1861 aa14.6□□□□□ -0.07
SPAST-203ENST00000615843 SND1-IT1Q9HBX3 110 aa14.6□□□□□ -0.07
SPAST-203ENST00000615843 LINC00322Q6ZN03 302 aaPredicted RBP14.6□□□□□ -0.07
SPAST-203ENST00000615843 DAND5Q8N907 189 aa14.6□□□□□ -0.07
SPAST-203ENST00000615843 GTF3C1Q12789 2109 aa14.6□□□□□ -0.07
SPAST-203ENST00000615843 MT-ATP8P03928 68 aa14.6□□□□□ -0.07
SPAST-203ENST00000615843 KIAA1671Q9BY89 1806 aa14.6□□□□□ -0.07
SPAST-203ENST00000615843 PLCE1Q9P212 2302 aa14.6□□□□□ -0.07
SPAST-203ENST00000615843 TEX22C9J3V5 150 aa14.59□□□□□ -0.07
SPAST-203ENST00000615843 F5H768 121 aa14.59□□□□□ -0.07
SPAST-203ENST00000615843 TCL1BO95988 128 aa14.59□□□□□ -0.07
SPAST-203ENST00000615843 SPANXB1Q9NS25 103 aaPredicted RBP14.59□□□□□ -0.07
SPAST-203ENST00000615843 ABCA4P78363 2273 aa14.59□□□□□ -0.07
SPAST-203ENST00000615843 NBL1P41271 181 aa14.59□□□□□ -0.07
SPAST-203ENST00000615843 DAD1P61803 113 aa14.58□□□□□ -0.08
SPAST-203ENST00000615843 MRPL23Q16540 153 aaKnown RBP14.58□□□□□ -0.08
SPAST-203ENST00000615843 CLPSL2Q6UWE3 100 aa14.58□□□□□ -0.08
SPAST-203ENST00000615843 XCL1P47992 114 aa14.58□□□□□ -0.08
SPAST-203ENST00000615843 C9orf47Q6ZRZ4 202 aa14.58□□□□□ -0.08
SPAST-203ENST00000615843 OBSL1O75147 1896 aa14.57□□□□□ -0.08
SPAST-203ENST00000615843 DYSFO75923 2080 aa14.57□□□□□ -0.08
SPAST-203ENST00000615843 C16orf54Q6UWD8 224 aa14.57□□□□□ -0.08
SPAST-203ENST00000615843 TRAV4A0A0B4J268 109 aa14.57□□□□□ -0.08
SPAST-203ENST00000615843 ANGP03950 147 aaKnown RBP14.57□□□□□ -0.08
SPAST-203ENST00000615843 IGHG2P01859 326 aa14.56□□□□□ -0.08
SPAST-203ENST00000615843 IGKV1D-37A0A075B6S9 117 aa14.56□□□□□ -0.08
SPAST-203ENST00000615843 MBD6Q96DN6 1003 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms