RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 TAL2Q16559 108 aa7.44□□□□□ -1.22
TNFRSF9-204ENST00000615230 C14orf144Q96I85 54 aa7.44□□□□□ -1.22
TNFRSF9-204ENST00000615230 DEFB131BA0A096LNP1 70 aa7.43□□□□□ -1.22
TNFRSF9-204ENST00000615230 EGR2P11161 476 aaPredicted RBP7.43□□□□□ -1.22
TNFRSF9-204ENST00000615230 C4orf48Q5BLP8 95 aa7.43□□□□□ -1.22
TNFRSF9-204ENST00000615230 LGALS9CQ6DKI2 356 aa7.43□□□□□ -1.22
TNFRSF9-204ENST00000615230 TP53BP1Q12888 1972 aaPredicted RBP7.43□□□□□ -1.22
TNFRSF9-204ENST00000615230 ETDCA0A1B0GVM5 59 aa7.43□□□□□ -1.22
TNFRSF9-204ENST00000615230 HIST1H2BKO60814 126 aa7.43□□□□□ -1.22
TNFRSF9-204ENST00000615230 HIST1H2BJP06899 126 aa7.43□□□□□ -1.22
TNFRSF9-204ENST00000615230 HIST1H2BOP23527 126 aa7.43□□□□□ -1.22
TNFRSF9-204ENST00000615230 HIST1H2BBP33778 126 aa7.43□□□□□ -1.22
TNFRSF9-204ENST00000615230 XCL1P47992 114 aa7.43□□□□□ -1.22
TNFRSF9-204ENST00000615230 HIST1H2BDP58876 126 aa7.43□□□□□ -1.22
TNFRSF9-204ENST00000615230 HIST1H2BCP62807 126 aa7.43□□□□□ -1.22
TNFRSF9-204ENST00000615230 HIST2H2BEQ16778 126 aa7.43□□□□□ -1.22
TNFRSF9-204ENST00000615230 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.43□□□□□ -1.22
TNFRSF9-204ENST00000615230 AMTNQ6UX39 209 aa7.43□□□□□ -1.22
TNFRSF9-204ENST00000615230 HIST1H2BHQ93079 126 aa7.43□□□□□ -1.22
TNFRSF9-204ENST00000615230 HIST1H2BNQ99877 126 aa7.43□□□□□ -1.22
TNFRSF9-204ENST00000615230 HIST1H2BMQ99879 126 aa7.43□□□□□ -1.22
TNFRSF9-204ENST00000615230 WIPF3A6NGB9 483 aa7.43□□□□□ -1.22
TNFRSF9-204ENST00000615230 C9JQL5 133 aa7.43□□□□□ -1.22
TNFRSF9-204ENST00000615230 K7EQG2 157 aa7.43□□□□□ -1.22
TNFRSF9-204ENST00000615230 NDUFA12Q9UI09 145 aa7.43□□□□□ -1.22
TNFRSF9-204ENST00000615230 CTAG1AP78358 180 aa7.42□□□□□ -1.22
TNFRSF9-204ENST00000615230 Q8N6K4 173 aa7.42□□□□□ -1.22
TNFRSF9-204ENST00000615230 LINC00482Q8N8I6 264 aa7.42□□□□□ -1.22
TNFRSF9-204ENST00000615230 Q8N1Y9 231 aa7.42□□□□□ -1.22
TNFRSF9-204ENST00000615230 SVILO95425 2214 aa7.42□□□□□ -1.22
TNFRSF9-204ENST00000615230 CACNA1EQ15878 2313 aa7.42□□□□□ -1.22
TNFRSF9-204ENST00000615230 NXPH4O95158 308 aa7.42□□□□□ -1.22
TNFRSF9-204ENST00000615230 ZNF479Q96JC4 524 aa7.42□□□□□ -1.22
TNFRSF9-204ENST00000615230 C17orf77Q96MU5 243 aa7.42□□□□□ -1.22
TNFRSF9-204ENST00000615230 SPANXDQ9BXN6 97 aa7.42□□□□□ -1.22
TNFRSF9-204ENST00000615230 HEATR1Q9H583 2144 aaKnown RBP7.41□□□□□ -1.22
TNFRSF9-204ENST00000615230 HLA-DMBP28068 263 aa7.41□□□□□ -1.22
TNFRSF9-204ENST00000615230 PFN2P35080 140 aa7.41□□□□□ -1.22
TNFRSF9-204ENST00000615230 HIST2H2BCQ6DN03 193 aa7.41□□□□□ -1.22
TNFRSF9-204ENST00000615230 ZC2HC1BQ5TFG8 222 aa7.41□□□□□ -1.22
TNFRSF9-204ENST00000615230 MYO7BQ6PIF6 2116 aa7.41□□□□□ -1.22
TNFRSF9-204ENST00000615230 Q6ZVH6 145 aa7.41□□□□□ -1.22
TNFRSF9-204ENST00000615230 F8VRH5 84 aa7.41□□□□□ -1.22
TNFRSF9-204ENST00000615230 BRI3O95415 125 aa7.41□□□□□ -1.22
TNFRSF9-204ENST00000615230 TRAV26-2A0A0B4J265 109 aa7.4□□□□□ -1.22
TNFRSF9-204ENST00000615230 IGLC2P0DOY2 106 aa7.4□□□□□ -1.22
TNFRSF9-204ENST00000615230 BVES-AS1Q5T3Y7 98 aa7.4□□□□□ -1.22
TNFRSF9-204ENST00000615230 SCRT2Q9NQ03 307 aa7.4□□□□□ -1.22
TNFRSF9-204ENST00000615230 UBE2AP49459 152 aa7.4□□□□□ -1.22
TNFRSF9-204ENST00000615230 NPC2P61916 151 aa7.4□□□□□ -1.22
TNFRSF9-204ENST00000615230 B9D2Q9BPU9 175 aa7.4□□□□□ -1.22
TNFRSF9-204ENST00000615230 IGLV1-40P01703 118 aa7.4□□□□□ -1.22
TNFRSF9-204ENST00000615230 PRB4P10163 310 aaPredicted RBP7.4□□□□□ -1.22
TNFRSF9-204ENST00000615230 ZNF664Q8N3J9 261 aa7.4□□□□□ -1.23
TNFRSF9-204ENST00000615230 CACNA1BQ00975 2339 aa7.4□□□□□ -1.23
TNFRSF9-204ENST00000615230 IGLV2-14P01704 120 aa7.4□□□□□ -1.23
TNFRSF9-204ENST00000615230 COX7B2Q8TF08 81 aa7.4□□□□□ -1.23
TNFRSF9-204ENST00000615230 GTSF1LQ9H1H1 148 aa7.4□□□□□ -1.23
TNFRSF9-204ENST00000615230 SNAI2O43623 268 aa7.39□□□□□ -1.23
TNFRSF9-204ENST00000615230 IFITM1P13164 125 aa7.39□□□□□ -1.23
TNFRSF9-204ENST00000615230 hDV102S1A0JD36 115 aa7.39□□□□□ -1.23
TNFRSF9-204ENST00000615230 C18orf32Q8TCD1 76 aa7.39□□□□□ -1.23
TNFRSF9-204ENST00000615230 CRIP2P52943 208 aaPredicted RBP7.39□□□□□ -1.23
TNFRSF9-204ENST00000615230 PATE2Q6UY27 113 aa7.39□□□□□ -1.23
TNFRSF9-204ENST00000615230 NPYP01303 97 aa7.39□□□□□ -1.23
TNFRSF9-204ENST00000615230 UNQ9165/PRO28630Q6UXU0 137 aa7.39□□□□□ -1.23
TNFRSF9-204ENST00000615230 SAMD5Q5TGI4 173 aa7.39□□□□□ -1.23
TNFRSF9-204ENST00000615230 C7orf33Q8WU49 177 aa7.39□□□□□ -1.23
TNFRSF9-204ENST00000615230 SOCS3O14543 225 aa7.38□□□□□ -1.23
TNFRSF9-204ENST00000615230 TRBV12-3P01733 135 aa7.38□□□□□ -1.23
TNFRSF9-204ENST00000615230 CLPSL2Q6UWE3 100 aa7.38□□□□□ -1.23
TNFRSF9-204ENST00000615230 HIST3H2BBQ8N257 126 aa7.38□□□□□ -1.23
TNFRSF9-204ENST00000615230 CYYR1Q96J86 154 aa7.38□□□□□ -1.23
TNFRSF9-204ENST00000615230 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.38□□□□□ -1.23
TNFRSF9-204ENST00000615230 IGKV2-29A2NJV5 120 aaPredicted RBP7.38□□□□□ -1.23
TNFRSF9-204ENST00000615230 CRYGDP07320 174 aa7.38□□□□□ -1.23
TNFRSF9-204ENST00000615230 YLPM1P49750 1951 aaKnown RBP7.38□□□□□ -1.23
TNFRSF9-204ENST00000615230 SPINK8P0C7L1 97 aa7.38□□□□□ -1.23
TNFRSF9-204ENST00000615230 VSIG2Q96IQ7 327 aa7.38□□□□□ -1.23
TNFRSF9-204ENST00000615230 CTRLP40313 264 aa7.37□□□□□ -1.23
TNFRSF9-204ENST00000615230 KMT2EQ8IZD2 1858 aa7.37□□□□□ -1.23
TNFRSF9-204ENST00000615230 TRAV8-2A0A0B4J237 113 aa7.37□□□□□ -1.23
TNFRSF9-204ENST00000615230 COLCA2A8K830 154 aa7.37□□□□□ -1.23
TNFRSF9-204ENST00000615230 H3BUT2 72 aa7.37□□□□□ -1.23
TNFRSF9-204ENST00000615230 TDRG1Q3Y452 100 aa7.37□□□□□ -1.23
TNFRSF9-204ENST00000615230 COL4A2P08572 1712 aa7.37□□□□□ -1.23
TNFRSF9-204ENST00000615230 P0C879 139 aa7.37□□□□□ -1.23
TNFRSF9-204ENST00000615230 FAM222AQ5U5X8 452 aa7.37□□□□□ -1.23
TNFRSF9-204ENST00000615230 C2orf82Q6UX34 121 aa7.37□□□□□ -1.23
TNFRSF9-204ENST00000615230 DSCR8Q96T75 97 aa7.37□□□□□ -1.23
TNFRSF9-204ENST00000615230 HIST1H2BLQ99880 126 aa7.37□□□□□ -1.23
TNFRSF9-204ENST00000615230 J3QQQ9 107 aa7.37□□□□□ -1.23
TNFRSF9-204ENST00000615230 C3orf79P0CE67 100 aa7.37□□□□□ -1.23
TNFRSF9-204ENST00000615230 C22orf34Q6ZV56 151 aa7.37□□□□□ -1.23
TNFRSF9-204ENST00000615230 CITED1Q99966 193 aa7.37□□□□□ -1.23
TNFRSF9-204ENST00000615230 TRBV20-1A0A075B6N2 111 aa7.36□□□□□ -1.23
TNFRSF9-204ENST00000615230 SIVA1O15304 175 aa7.36□□□□□ -1.23
TNFRSF9-204ENST00000615230 TIMM17AQ99595 171 aa7.36□□□□□ -1.23
TNFRSF9-204ENST00000615230 TRBV6-4A0A1B0GX49 114 aa7.36□□□□□ -1.23
TNFRSF9-204ENST00000615230 BRWD1Q9NSI6 2320 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms