RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 TRRAPQ9Y4A5 3859 aa2.55□□□□□ -2
LIG4-205ENST00000614526 IGHV3-73A0A0B4J1V6 119 aa2.55□□□□□ -2
LIG4-205ENST00000614526 IGHV1-24A0A0C4DH33 117 aa2.55□□□□□ -2
LIG4-205ENST00000614526 SPATA3Q8NHX4 192 aa2.55□□□□□ -2
LIG4-205ENST00000614526 RNF185Q96GF1 192 aa2.55□□□□□ -2
LIG4-205ENST00000614526 C18orf15Q96N68 181 aa2.55□□□□□ -2
LIG4-205ENST00000614526 SIGLEC8Q9NYZ4 499 aa2.55□□□□□ -2
LIG4-205ENST00000614526 XCL2Q9UBD3 114 aa2.55□□□□□ -2
LIG4-205ENST00000614526 TSSC4Q9Y5U2 329 aaPredicted RBP2.55□□□□□ -2
LIG4-205ENST00000614526 F5H697 171 aa2.55□□□□□ -2
LIG4-205ENST00000614526 RBMY1A1P0DJD3 496 aaKnown RBP2.55□□□□□ -2
LIG4-205ENST00000614526 RBMY1CP0DJD4 496 aa2.55□□□□□ -2
LIG4-205ENST00000614526 RNASE3P12724 160 aaKnown RBP2.55□□□□□ -2
LIG4-205ENST00000614526 CDKN1BP46527 198 aa2.55□□□□□ -2
LIG4-205ENST00000614526 RBMY1FQ15415 496 aaKnown RBP2.55□□□□□ -2
LIG4-205ENST00000614526 SMIM15Q7Z3B0 74 aa2.55□□□□□ -2
LIG4-205ENST00000614526 NEGR1Q7Z3B1 354 aa2.55□□□□□ -2
LIG4-205ENST00000614526 SPATA12Q7Z6I5 190 aa2.55□□□□□ -2
LIG4-205ENST00000614526 Q8N1Y9 231 aa2.55□□□□□ -2
LIG4-205ENST00000614526 AP5S1Q9NUS5 200 aa2.55□□□□□ -2
LIG4-205ENST00000614526 MUC4Q99102 2169 aa2.55□□□□□ -2
LIG4-205ENST00000614526 C7orf71A4D174 169 aa2.54□□□□□ -2
LIG4-205ENST00000614526 RBMY1BA6NDE4 496 aaKnown RBP2.54□□□□□ -2
LIG4-205ENST00000614526 RBMY1EA6NEQ0 496 aaKnown RBP2.54□□□□□ -2
LIG4-205ENST00000614526 OR4C46A6NHA9 309 aa2.54□□□□□ -2
LIG4-205ENST00000614526 CBY3A6NI87 242 aa2.54□□□□□ -2
LIG4-205ENST00000614526 TCAPO15273 167 aa2.54□□□□□ -2
LIG4-205ENST00000614526 TCF21O43680 179 aa2.54□□□□□ -2
LIG4-205ENST00000614526 LEPROTL1O95214 131 aa2.54□□□□□ -2
LIG4-205ENST00000614526 RBMY1DP0C7P1 496 aaKnown RBP2.54□□□□□ -2
LIG4-205ENST00000614526 ZNF493Q6ZR52 646 aa2.54□□□□□ -2
LIG4-205ENST00000614526 RPL39LQ96EH5 51 aaKnown RBP2.54□□□□□ -2
LIG4-205ENST00000614526 TMEM191AQ9H0A3 160 aa2.54□□□□□ -2
LIG4-205ENST00000614526 MAP6D1Q9H9H5 199 aa2.54□□□□□ -2
LIG4-205ENST00000614526 CYSRT1A8MQ03 144 aa2.54□□□□□ -2
LIG4-205ENST00000614526 KLLNB2CW77 178 aa2.54□□□□□ -2
LIG4-205ENST00000614526 H3BMM0 161 aa2.54□□□□□ -2
LIG4-205ENST00000614526 TNFRSF6BO95407 300 aa2.54□□□□□ -2
LIG4-205ENST00000614526 PF4P02776 101 aa2.54□□□□□ -2
LIG4-205ENST00000614526 ESDP10768 282 aa2.54□□□□□ -2
LIG4-205ENST00000614526 RPL35AP18077 110 aaKnown RBP2.54□□□□□ -2
LIG4-205ENST00000614526 PROK1P58294 105 aa2.54□□□□□ -2
LIG4-205ENST00000614526 SCGB2A2Q13296 93 aa2.54□□□□□ -2
LIG4-205ENST00000614526 FAM19A4Q96LR4 140 aa2.54□□□□□ -2
LIG4-205ENST00000614526 LENEPQ9Y5L5 61 aa2.54□□□□□ -2
LIG4-205ENST00000614526 STAB1Q9NY15 2570 aa2.54□□□□□ -2
LIG4-205ENST00000614526 A0A1B0GW15 77 aa2.54□□□□□ -2
LIG4-205ENST00000614526 ODF3L2Q3SX64 289 aa2.54□□□□□ -2
LIG4-205ENST00000614526 FOXI2Q6ZQN5 318 aa2.54□□□□□ -2
LIG4-205ENST00000614526 LINC01587Q99440 93 aa2.54□□□□□ -2
LIG4-205ENST00000614526 TMEM208Q9BTX3 173 aa2.54□□□□□ -2
LIG4-205ENST00000614526 TP73-AS1Q9UF72 201 aa2.54□□□□□ -2
LIG4-205ENST00000614526 ZNF256Q9Y2P7 627 aaPredicted RBP2.54□□□□□ -2
LIG4-205ENST00000614526 ADARB2-AS1A8MUL3 147 aa2.53□□□□□ -2
LIG4-205ENST00000614526 OR5AL1P0C617 328 aa2.53□□□□□ -2
LIG4-205ENST00000614526 BTF3P20290 206 aaKnown RBP2.53□□□□□ -2
LIG4-205ENST00000614526 LEPP41159 167 aa2.53□□□□□ -2
LIG4-205ENST00000614526 AMTNQ6UX39 209 aa2.53□□□□□ -2
LIG4-205ENST00000614526 Q8N976 141 aa2.53□□□□□ -2
LIG4-205ENST00000614526 OR2K2Q8NGT1 345 aa2.53□□□□□ -2
LIG4-205ENST00000614526 MAST4O15021 2626 aa2.53□□□□□ -2
LIG4-205ENST00000614526 IGHV1OR15-1A0A075B7D0 117 aa2.53□□□□□ -2
LIG4-205ENST00000614526 TSTD3H0UI37 97 aa2.53□□□□□ -2
LIG4-205ENST00000614526 CRXO43186 299 aaPredicted RBP2.53□□□□□ -2
LIG4-205ENST00000614526 DUSP14O95147 198 aaKnown RBP2.53□□□□□ -2
LIG4-205ENST00000614526 SMIM17P0DL12 118 aa2.53□□□□□ -2
LIG4-205ENST00000614526 TSPOP30536 169 aa2.53□□□□□ -2
LIG4-205ENST00000614526 FHL3Q13643 280 aa2.53□□□□□ -2
LIG4-205ENST00000614526 ZNF876PQ49A33 203 aa2.53□□□□□ -2
LIG4-205ENST00000614526 ZNF705AQ6ZN79 300 aaPredicted RBP2.53□□□□□ -2
LIG4-205ENST00000614526 STHQ8IWL8 128 aa2.53□□□□□ -2
LIG4-205ENST00000614526 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.53□□□□□ -2
LIG4-205ENST00000614526 C14orf144Q96I85 54 aa2.53□□□□□ -2
LIG4-205ENST00000614526 JMJD8Q96S16 334 aa2.53□□□□□ -2
LIG4-205ENST00000614526 VAMP8Q9BV40 100 aa2.53□□□□□ -2
LIG4-205ENST00000614526 KRTAP17-1Q9BYP8 105 aa2.53□□□□□ -2
LIG4-205ENST00000614526 MAP1LC3AQ9H492 121 aa2.53□□□□□ -2
LIG4-205ENST00000614526 C16orf95Q9H693 158 aa2.53□□□□□ -2
LIG4-205ENST00000614526 A0A096LNJ9 63 aa2.53□□□□□ -2
LIG4-205ENST00000614526 hDV102S1A0JD36 115 aa2.53□□□□□ -2
LIG4-205ENST00000614526 OR11H12B2RN74 326 aa2.53□□□□□ -2
LIG4-205ENST00000614526 SNAI2O43623 268 aa2.53□□□□□ -2
LIG4-205ENST00000614526 HLA-DRB4P13762 266 aa2.53□□□□□ -2
LIG4-205ENST00000614526 AZU1P20160 251 aa2.53□□□□□ -2
LIG4-205ENST00000614526 GATD1Q8NB37 220 aa2.53□□□□□ -2
LIG4-205ENST00000614526 CHCHD1Q96BP2 118 aaKnown RBP2.53□□□□□ -2
LIG4-205ENST00000614526 TMEM70Q9BUB7 260 aa2.53□□□□□ -2
LIG4-205ENST00000614526 CNFNQ9BYD5 112 aa2.53□□□□□ -2
LIG4-205ENST00000614526 HLA-DRB4X5D2U9 266 aa2.53□□□□□ -2
LIG4-205ENST00000614526 IGHV3-16A0A0C4DH30 117 aa2.52□□□□□ -2.01
LIG4-205ENST00000614526 DDTP30046 118 aa2.52□□□□□ -2.01
LIG4-205ENST00000614526 PKIAP61925 76 aa2.52□□□□□ -2.01
LIG4-205ENST00000614526 ZNF56Q15929 161 aa2.52□□□□□ -2.01
LIG4-205ENST00000614526 SAMD13Q5VXD3 122 aa2.52□□□□□ -2.01
LIG4-205ENST00000614526 SPAG8Q99932 426 aaPredicted RBP2.52□□□□□ -2.01
LIG4-205ENST00000614526 COL6A5A8TX70 2615 aa2.52□□□□□ -2.01
LIG4-205ENST00000614526 FBN1P35555 2871 aaKnown RBP2.52□□□□□ -2.01
LIG4-205ENST00000614526 SYS1-DBNDD2H3BUS1 97 aa2.52□□□□□ -2.01
LIG4-205ENST00000614526 P0DMU3 169 aa2.52□□□□□ -2.01
LIG4-205ENST00000614526 FAM231AP0DMU4 169 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms