RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 CNOT1A5YKK6 2376 aaKnown RBP12.56□□□□□ -0.4
TSKU-205ENST00000612930 ODF3BA8MYP8 253 aa12.55□□□□□ -0.4
TSKU-205ENST00000612930 M0QXV9 152 aa12.55□□□□□ -0.4
TSKU-205ENST00000612930 ASIPP42127 132 aa12.55□□□□□ -0.4
TSKU-205ENST00000612930 Q8N6K4 173 aa12.55□□□□□ -0.4
TSKU-205ENST00000612930 CCDC179H3BU77 68 aa12.55□□□□□ -0.4
TSKU-205ENST00000612930 DEFB104AQ8WTQ1 72 aa12.55□□□□□ -0.4
TSKU-205ENST00000612930 IGIPA6NJ69 53 aa12.55□□□□□ -0.4
TSKU-205ENST00000612930 TIMD4Q96H15 378 aa12.54□□□□□ -0.4
TSKU-205ENST00000612930 PRO3102Q9H379 93 aa12.54□□□□□ -0.4
TSKU-205ENST00000612930 TP53TG1Q9Y2A0 90 aa12.54□□□□□ -0.4
TSKU-205ENST00000612930 SNCGO76070 127 aa12.54□□□□□ -0.4
TSKU-205ENST00000612930 IGHV3-33P01772 117 aa12.54□□□□□ -0.4
TSKU-205ENST00000612930 PAPPA-AS1Q5QFB9 102 aa12.54□□□□□ -0.4
TSKU-205ENST00000612930 A4D1N5 150 aa12.53□□□□□ -0.4
TSKU-205ENST00000612930 B9A039 149 aa12.53□□□□□ -0.4
TSKU-205ENST00000612930 PMVKQ15126 192 aa12.53□□□□□ -0.4
TSKU-205ENST00000612930 Q8N1Y9 231 aa12.53□□□□□ -0.4
TSKU-205ENST00000612930 CCDC140Q96MF4 163 aa12.53□□□□□ -0.4
TSKU-205ENST00000612930 CLEC19AQ6UXS0 136 aa12.53□□□□□ -0.4
TSKU-205ENST00000612930 PIP4P1Q86T03 277 aa12.53□□□□□ -0.4
TSKU-205ENST00000612930 ZNRF2Q8NHG8 242 aa12.53□□□□□ -0.4
TSKU-205ENST00000612930 NTN5Q8WTR8 489 aaPredicted RBP12.53□□□□□ -0.4
TSKU-205ENST00000612930 C20orf173Q96LM9 149 aa12.53□□□□□ -0.4
TSKU-205ENST00000612930 PHLDA3Q9Y5J5 127 aa12.53□□□□□ -0.4
TSKU-205ENST00000612930 GAGE12JA6NER3 117 aa12.52□□□□□ -0.41
TSKU-205ENST00000612930 GAGE7O76087 117 aa12.52□□□□□ -0.41
TSKU-205ENST00000612930 GAGE12FP0CL80 117 aa12.52□□□□□ -0.41
TSKU-205ENST00000612930 GAGE12GP0CL81 117 aa12.52□□□□□ -0.41
TSKU-205ENST00000612930 GAGE12IP0CL82 117 aa12.52□□□□□ -0.41
TSKU-205ENST00000612930 S100A4P26447 101 aaKnown RBP12.52□□□□□ -0.41
TSKU-205ENST00000612930 GAGE4Q13068 117 aa12.52□□□□□ -0.41
TSKU-205ENST00000612930 TMEM170BQ5T4T1 132 aa12.52□□□□□ -0.41
TSKU-205ENST00000612930 ZFAND2AQ8N6M9 145 aa12.52□□□□□ -0.41
TSKU-205ENST00000612930 TMEM263Q8WUH6 116 aaKnown RBP12.52□□□□□ -0.41
TSKU-205ENST00000612930 IGHV1-69DA0A0B4J2H0 117 aa12.52□□□□□ -0.41
TSKU-205ENST00000612930 ELANEP08246 267 aa12.52□□□□□ -0.41
TSKU-205ENST00000612930 RPL39P62891 51 aaKnown RBP12.52□□□□□ -0.41
TSKU-205ENST00000612930 LAMA5O15230 3695 aa12.51□□□□□ -0.41
TSKU-205ENST00000612930 TRBV7-9A0A0J9YWB2 115 aa12.51□□□□□ -0.41
TSKU-205ENST00000612930 J3QQQ9 107 aa12.51□□□□□ -0.41
TSKU-205ENST00000612930 ECSCRQ19T08 205 aa12.51□□□□□ -0.41
TSKU-205ENST00000612930 FAM110DQ8TAY7 271 aaPredicted RBP12.51□□□□□ -0.41
TSKU-205ENST00000612930 H7C2G1 150 aa12.5□□□□□ -0.41
TSKU-205ENST00000612930 IFITM1P13164 125 aa12.5□□□□□ -0.41
TSKU-205ENST00000612930 Q8N9W7 124 aa12.5□□□□□ -0.41
TSKU-205ENST00000612930 ODF3Q96PU9 254 aa12.5□□□□□ -0.41
TSKU-205ENST00000612930 MGAQ8IWI9 3026 aa12.5□□□□□ -0.41
TSKU-205ENST00000612930 ARL3P36405 182 aa12.5□□□□□ -0.41
TSKU-205ENST00000612930 EBI3Q14213 229 aa12.5□□□□□ -0.41
TSKU-205ENST00000612930 TTC32Q5I0X7 151 aa12.5□□□□□ -0.41
TSKU-205ENST00000612930 C16orf92Q96LL3 132 aa12.5□□□□□ -0.41
TSKU-205ENST00000612930 METTL26Q96S19 204 aa12.5□□□□□ -0.41
TSKU-205ENST00000612930 LENEPQ9Y5L5 61 aa12.5□□□□□ -0.41
TSKU-205ENST00000612930 U3KQE9 123 aa12.5□□□□□ -0.41
TSKU-205ENST00000612930 SHISA2Q6UWI4 295 aa12.49□□□□□ -0.41
TSKU-205ENST00000612930 MAP1BP46821 2468 aaKnown RBP12.49□□□□□ -0.41
TSKU-205ENST00000612930 TRAV21A0A0B4J279 112 aa12.49□□□□□ -0.41
TSKU-205ENST00000612930 GNRH2O43555 120 aa12.49□□□□□ -0.41
TSKU-205ENST00000612930 P0DMU3 169 aa12.49□□□□□ -0.41
TSKU-205ENST00000612930 FAM231AP0DMU4 169 aa12.49□□□□□ -0.41
TSKU-205ENST00000612930 FAM231CP0DMU5 169 aa12.49□□□□□ -0.41
TSKU-205ENST00000612930 Q6Q795 121 aa12.49□□□□□ -0.41
TSKU-205ENST00000612930 VMO1Q7Z5L0 202 aa12.49□□□□□ -0.41
TSKU-205ENST00000612930 POM121L12Q8N7R1 296 aa12.49□□□□□ -0.41
TSKU-205ENST00000612930 ITLN2Q8WWU7 325 aaPredicted RBP12.49□□□□□ -0.41
TSKU-205ENST00000612930 DMXL1Q9Y485 3027 aa12.48□□□□□ -0.41
TSKU-205ENST00000612930 LY6HO94772 140 aa12.48□□□□□ -0.41
TSKU-205ENST00000612930 RNASE3P12724 160 aaKnown RBP12.48□□□□□ -0.41
TSKU-205ENST00000612930 LINC00315P59091 139 aa12.48□□□□□ -0.41
TSKU-205ENST00000612930 DEFB1P60022 68 aa12.48□□□□□ -0.41
TSKU-205ENST00000612930 CFAP161Q6P656 301 aa12.48□□□□□ -0.41
TSKU-205ENST00000612930 MUC4Q99102 2169 aa12.48□□□□□ -0.41
TSKU-205ENST00000612930 TEX49A0A1B0GTD5 131 aa12.48□□□□□ -0.41
TSKU-205ENST00000612930 APC2O95996 2303 aa12.48□□□□□ -0.41
TSKU-205ENST00000612930 PPP1R17O96001 155 aa12.48□□□□□ -0.41
TSKU-205ENST00000612930 ZNF876PQ49A33 203 aa12.48□□□□□ -0.41
TSKU-205ENST00000612930 FAM110AQ9BQ89 295 aa12.48□□□□□ -0.41
TSKU-205ENST00000612930 LGALS3P17931 250 aaKnown RBP12.47□□□□□ -0.41
TSKU-205ENST00000612930 POLR2KP53803 58 aaKnown RBP12.47□□□□□ -0.41
TSKU-205ENST00000612930 LINC01620Q4KN68 170 aa12.47□□□□□ -0.41
TSKU-205ENST00000612930 TMEM141Q96I45 108 aa12.47□□□□□ -0.41
TSKU-205ENST00000612930 KIF25-AS1Q9Y6Z4 181 aa12.47□□□□□ -0.41
TSKU-205ENST00000612930 A0A0B4J2C4 111 aa12.47□□□□□ -0.41
TSKU-205ENST00000612930 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.47□□□□□ -0.41
TSKU-205ENST00000612930 M0R1W7 72 aa12.47□□□□□ -0.41
TSKU-205ENST00000612930 HERV-K104P63124 156 aa12.47□□□□□ -0.41
TSKU-205ENST00000612930 DEFB124Q8NES8 71 aa12.47□□□□□ -0.41
TSKU-205ENST00000612930 DCHS2Q6V1P9 2916 aa12.47□□□□□ -0.41
TSKU-205ENST00000612930 ABCA4P78363 2273 aa12.46□□□□□ -0.41
TSKU-205ENST00000612930 ATP6V0E1O15342 81 aa12.46□□□□□ -0.41
TSKU-205ENST00000612930 KLK9Q2XQG4 91 aa12.46□□□□□ -0.41
TSKU-205ENST00000612930 MUSTN1Q8IVN3 82 aa12.46□□□□□ -0.41
TSKU-205ENST00000612930 LINC00477Q96M19 166 aa12.46□□□□□ -0.41
TSKU-205ENST00000612930 TIMM17AQ99595 171 aa12.46□□□□□ -0.41
TSKU-205ENST00000612930 KLK9Q9UKQ9 250 aa12.46□□□□□ -0.41
TSKU-205ENST00000612930 TRAV2A0A0B4J234 112 aa12.46□□□□□ -0.41
TSKU-205ENST00000612930 MED14OSP0DP75 135 aa12.46□□□□□ -0.41
TSKU-205ENST00000612930 RPL32P62910 135 aaKnown RBP12.46□□□□□ -0.41
TSKU-205ENST00000612930 TCF15Q12870 199 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms