RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 IGHV3-74A0A0B4J1X5 117 aa8.33□□□□□ -1.08
PCDHGC3-202ENST00000611950 IGLV2-11P01706 119 aa8.33□□□□□ -1.08
PCDHGC3-202ENST00000611950 CD3EP07766 207 aa8.33□□□□□ -1.08
PCDHGC3-202ENST00000611950 COX6B1P14854 86 aa8.33□□□□□ -1.08
PCDHGC3-202ENST00000611950 GATD1Q8NB37 220 aa8.33□□□□□ -1.08
PCDHGC3-202ENST00000611950 Q8TAT8 98 aa8.33□□□□□ -1.08
PCDHGC3-202ENST00000611950 PRSS22Q9GZN4 317 aa8.33□□□□□ -1.08
PCDHGC3-202ENST00000611950 NCBP2LA6PVI3 153 aaKnown RBP8.32□□□□□ -1.08
PCDHGC3-202ENST00000611950 CCL21O00585 134 aa8.32□□□□□ -1.08
PCDHGC3-202ENST00000611950 APOHP02749 345 aaPredicted RBP8.32□□□□□ -1.08
PCDHGC3-202ENST00000611950 FGF6P10767 208 aa8.32□□□□□ -1.08
PCDHGC3-202ENST00000611950 LOXL1Q08397 574 aaPredicted RBP8.32□□□□□ -1.08
PCDHGC3-202ENST00000611950 KLF5Q13887 457 aaPredicted RBP8.32□□□□□ -1.08
PCDHGC3-202ENST00000611950 OR4X2Q8NGF9 303 aa8.32□□□□□ -1.08
PCDHGC3-202ENST00000611950 ITLN2Q8WWU7 325 aaPredicted RBP8.32□□□□□ -1.08
PCDHGC3-202ENST00000611950 VKORC1Q9BQB6 163 aa8.32□□□□□ -1.08
PCDHGC3-202ENST00000611950 IGKV2-40A0A087WW87 121 aaPredicted RBP8.32□□□□□ -1.08
PCDHGC3-202ENST00000611950 FAM236AA0A1B0GUQ0 79 aa8.32□□□□□ -1.08
PCDHGC3-202ENST00000611950 FAM236BA0A1B0GV22 79 aa8.32□□□□□ -1.08
PCDHGC3-202ENST00000611950 SMKR1H3BMG3 65 aa8.32□□□□□ -1.08
PCDHGC3-202ENST00000611950 I3L2K1 104 aa8.32□□□□□ -1.08
PCDHGC3-202ENST00000611950 IGKV2D-40P01614 121 aaPredicted RBP8.32□□□□□ -1.08
PCDHGC3-202ENST00000611950 HLA-DMBP28068 263 aa8.32□□□□□ -1.08
PCDHGC3-202ENST00000611950 CDSNQ15517 529 aa8.32□□□□□ -1.08
PCDHGC3-202ENST00000611950 C1orf195Q5TG92 126 aa8.32□□□□□ -1.08
PCDHGC3-202ENST00000611950 OR8A1Q8NGG7 326 aa8.32□□□□□ -1.08
PCDHGC3-202ENST00000611950 JPT2Q9H910 190 aa8.32□□□□□ -1.08
PCDHGC3-202ENST00000611950 K7EIM0 57 aa8.31□□□□□ -1.08
PCDHGC3-202ENST00000611950 NCR2O95944 276 aa8.31□□□□□ -1.08
PCDHGC3-202ENST00000611950 ADORA2A-AS1P86434 159 aa8.31□□□□□ -1.08
PCDHGC3-202ENST00000611950 ZNF672Q499Z4 452 aaPredicted RBP8.31□□□□□ -1.08
PCDHGC3-202ENST00000611950 ATP5L2Q7Z4Y8 100 aa8.31□□□□□ -1.08
PCDHGC3-202ENST00000611950 TMEM75Q8N9X5 138 aa8.31□□□□□ -1.08
PCDHGC3-202ENST00000611950 PHLDA1Q8WV24 401 aaPredicted RBP8.31□□□□□ -1.08
PCDHGC3-202ENST00000611950 PPDPFLQ8WWR9 84 aa8.31□□□□□ -1.08
PCDHGC3-202ENST00000611950 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.31□□□□□ -1.08
PCDHGC3-202ENST00000611950 IGHV3-66A0A0C4DH42 116 aa8.31□□□□□ -1.08
PCDHGC3-202ENST00000611950 ZNF688P0C7X2 276 aa8.31□□□□□ -1.08
PCDHGC3-202ENST00000611950 CRIP1P50238 77 aa8.31□□□□□ -1.08
PCDHGC3-202ENST00000611950 FAM236DA0A1B0GTK5 79 aa8.3□□□□□ -1.08
PCDHGC3-202ENST00000611950 FAM236CP0DP71 79 aa8.3□□□□□ -1.08
PCDHGC3-202ENST00000611950 TAL2Q16559 108 aa8.3□□□□□ -1.08
PCDHGC3-202ENST00000611950 PRSS3P2Q8NHM4 247 aa8.3□□□□□ -1.08
PCDHGC3-202ENST00000611950 OTORQ9NRC9 128 aa8.3□□□□□ -1.08
PCDHGC3-202ENST00000611950 A0A1B0GUT8 65 aa8.3□□□□□ -1.08
PCDHGC3-202ENST00000611950 CSN1S1P47710 185 aa8.3□□□□□ -1.08
PCDHGC3-202ENST00000611950 NIPBLQ6KC79 2804 aaeCLIP8.3□□□□□ -1.08
PCDHGC3-202ENST00000611950 TRBV19A0A075B6N1 114 aa8.3□□□□□ -1.08
PCDHGC3-202ENST00000611950 IGHV3-49A0A0A0MS15 119 aa8.3□□□□□ -1.08
PCDHGC3-202ENST00000611950 DUSP14O95147 198 aaKnown RBP8.3□□□□□ -1.08
PCDHGC3-202ENST00000611950 IFI27P40305 119 aaPredicted RBP8.3□□□□□ -1.08
PCDHGC3-202ENST00000611950 AMTNQ6UX39 209 aa8.3□□□□□ -1.08
PCDHGC3-202ENST00000611950 IL17RELQ6ZVW7 336 aa8.3□□□□□ -1.08
PCDHGC3-202ENST00000611950 AMN1Q8IY45 258 aa8.3□□□□□ -1.08
PCDHGC3-202ENST00000611950 ZNF491Q8N8L2 437 aa8.3□□□□□ -1.08
PCDHGC3-202ENST00000611950 KLK5Q9Y337 293 aaPredicted RBP8.3□□□□□ -1.08
PCDHGC3-202ENST00000611950 SMCPP49901 116 aaPredicted RBP8.29□□□□□ -1.08
PCDHGC3-202ENST00000611950 NDPQ00604 133 aa8.29□□□□□ -1.08
PCDHGC3-202ENST00000611950 C9orf153Q5TBE3 101 aa8.29□□□□□ -1.08
PCDHGC3-202ENST00000611950 ZC2HC1BQ5TFG8 222 aa8.29□□□□□ -1.08
PCDHGC3-202ENST00000611950 Q6ZQT7 251 aa8.29□□□□□ -1.08
PCDHGC3-202ENST00000611950 D6R8Y8 96 aa8.29□□□□□ -1.08
PCDHGC3-202ENST00000611950 FAM19A1Q7Z5A9 133 aa8.29□□□□□ -1.08
PCDHGC3-202ENST00000611950 C10orf126Q8N4M7 172 aa8.29□□□□□ -1.08
PCDHGC3-202ENST00000611950 TIMD4Q96H15 378 aa8.29□□□□□ -1.08
PCDHGC3-202ENST00000611950 RETNQ9HD89 108 aa8.29□□□□□ -1.08
PCDHGC3-202ENST00000611950 AP5S1Q9NUS5 200 aa8.29□□□□□ -1.08
PCDHGC3-202ENST00000611950 LY6LH3BQJ8 138 aa8.28□□□□□ -1.08
PCDHGC3-202ENST00000611950 LYZL1Q6UWQ5 148 aa8.28□□□□□ -1.08
PCDHGC3-202ENST00000611950 IGLL5B9A064 214 aa8.28□□□□□ -1.08
PCDHGC3-202ENST00000611950 NDUFS7O75251 213 aa8.28□□□□□ -1.08
PCDHGC3-202ENST00000611950 CFAP126Q5VTH2 177 aa8.28□□□□□ -1.08
PCDHGC3-202ENST00000611950 DYNAPQ8N1N2 210 aa8.28□□□□□ -1.08
PCDHGC3-202ENST00000611950 SHANK2-AS3Q9BTD1 123 aa8.28□□□□□ -1.08
PCDHGC3-202ENST00000611950 ZNF492Q9P255 531 aa8.28□□□□□ -1.08
PCDHGC3-202ENST00000611950 AKAP9Q99996 3911 aa8.27□□□□□ -1.08
PCDHGC3-202ENST00000611950 OR5AL1P0C617 328 aa8.27□□□□□ -1.09
PCDHGC3-202ENST00000611950 KRTAP10-9P60411 292 aa8.27□□□□□ -1.09
PCDHGC3-202ENST00000611950 DTX2Q86UW9 622 aa8.27□□□□□ -1.09
PCDHGC3-202ENST00000611950 CHCHD5Q9BSY4 110 aa8.27□□□□□ -1.09
PCDHGC3-202ENST00000611950 ASIPP42127 132 aa8.27□□□□□ -1.09
PCDHGC3-202ENST00000611950 KHDC1LQ5JSQ8 128 aa8.27□□□□□ -1.09
PCDHGC3-202ENST00000611950 C3orf22Q8N5N4 141 aa8.27□□□□□ -1.09
PCDHGC3-202ENST00000611950 ZNF414Q96IQ9 312 aa8.27□□□□□ -1.09
PCDHGC3-202ENST00000611950 H3BRN7 92 aa8.26□□□□□ -1.09
PCDHGC3-202ENST00000611950 C19orf84I3L1E1 186 aa8.26□□□□□ -1.09
PCDHGC3-202ENST00000611950 GAS8-AS1O95177 125 aa8.26□□□□□ -1.09
PCDHGC3-202ENST00000611950 MSRB1Q9NZV6 116 aa8.26□□□□□ -1.09
PCDHGC3-202ENST00000611950 NPIPB6E9PJ23 425 aa8.26□□□□□ -1.09
PCDHGC3-202ENST00000611950 OVOL3O00110 214 aa8.26□□□□□ -1.09
PCDHGC3-202ENST00000611950 CHCHD1Q96BP2 118 aaKnown RBP8.26□□□□□ -1.09
PCDHGC3-202ENST00000611950 TP53TG1Q9Y2A0 90 aa8.26□□□□□ -1.09
PCDHGC3-202ENST00000611950 CSPG4Q6UVK1 2322 aa8.26□□□□□ -1.09
PCDHGC3-202ENST00000611950 M0R2P5 195 aa8.25□□□□□ -1.09
PCDHGC3-202ENST00000611950 HAX1O00165 279 aa8.25□□□□□ -1.09
PCDHGC3-202ENST00000611950 OXTP01178 125 aa8.25□□□□□ -1.09
PCDHGC3-202ENST00000611950 FBXL19-AS1Q494R0 122 aa8.25□□□□□ -1.09
PCDHGC3-202ENST00000611950 RNF182Q8N6D2 247 aa8.25□□□□□ -1.09
PCDHGC3-202ENST00000611950 LY6G5BQ8NDX9 201 aa8.25□□□□□ -1.09
PCDHGC3-202ENST00000611950 DPH3Q96FX2 82 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms