RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 TRBV25-1A0A075B6N4 114 aa12.95□□□□□ -0.34
NEK3-206ENST00000611833 GAGE12BA1L429 117 aa12.95□□□□□ -0.34
NEK3-206ENST00000611833 IGHV4-59P01825 116 aa12.95□□□□□ -0.34
NEK3-206ENST00000611833 RBX1P62877 108 aa12.95□□□□□ -0.34
NEK3-206ENST00000611833 CST9LQ9H4G1 147 aa12.95□□□□□ -0.34
NEK3-206ENST00000611833 GATA3P23771 443 aa12.95□□□□□ -0.34
NEK3-206ENST00000611833 DEFB112Q30KQ8 113 aa12.95□□□□□ -0.34
NEK3-206ENST00000611833 FAM159AQ6UWV7 190 aa12.95□□□□□ -0.34
NEK3-206ENST00000611833 TOMM6Q96B49 74 aa12.95□□□□□ -0.34
NEK3-206ENST00000611833 JMJD8Q96S16 334 aa12.95□□□□□ -0.34
NEK3-206ENST00000611833 H7C1H1 209 aa12.94□□□□□ -0.34
NEK3-206ENST00000611833 WFDC12Q8WWY7 111 aa12.94□□□□□ -0.34
NEK3-206ENST00000611833 TRAV12-1A0A0B4J245 112 aa12.94□□□□□ -0.34
NEK3-206ENST00000611833 K7EMI3 77 aa12.94□□□□□ -0.34
NEK3-206ENST00000611833 PPP1R17O96001 155 aa12.94□□□□□ -0.34
NEK3-206ENST00000611833 HLA-DRB4P13762 266 aa12.94□□□□□ -0.34
NEK3-206ENST00000611833 SLC25A16P16260 332 aa12.94□□□□□ -0.34
NEK3-206ENST00000611833 DSCR9P59020 149 aa12.94□□□□□ -0.34
NEK3-206ENST00000611833 HLA-DRB4X5D2U9 266 aa12.94□□□□□ -0.34
NEK3-206ENST00000611833 CSPG4Q6UVK1 2322 aa12.93□□□□□ -0.34
NEK3-206ENST00000611833 KLLNB2CW77 178 aa12.93□□□□□ -0.34
NEK3-206ENST00000611833 F8VRH5 84 aa12.93□□□□□ -0.34
NEK3-206ENST00000611833 SMIM13P0DJ93 91 aa12.93□□□□□ -0.34
NEK3-206ENST00000611833 PSMB8P28062 276 aa12.93□□□□□ -0.34
NEK3-206ENST00000611833 SAMD13Q5VXD3 122 aa12.93□□□□□ -0.34
NEK3-206ENST00000611833 C10orf99Q6UWK7 81 aa12.93□□□□□ -0.34
NEK3-206ENST00000611833 DCANP1Q8TF63 244 aa12.93□□□□□ -0.34
NEK3-206ENST00000611833 RNF151Q2KHN1 245 aa12.93□□□□□ -0.34
NEK3-206ENST00000611833 CHTOPQ9Y3Y2 248 aaKnown RBP12.93□□□□□ -0.34
NEK3-206ENST00000611833 FXYD2P54710 66 aa12.92□□□□□ -0.34
NEK3-206ENST00000611833 ZNF580Q9UK33 172 aa12.92□□□□□ -0.34
NEK3-206ENST00000611833 C2orf66Q6UXQ4 117 aa12.91□□□□□ -0.34
NEK3-206ENST00000611833 MAPKAPK5-AS1Q8N8E1 139 aa12.91□□□□□ -0.34
NEK3-206ENST00000611833 LINC01356Q8N9X3 169 aa12.91□□□□□ -0.34
NEK3-206ENST00000611833 CSTL1Q9H114 145 aa12.91□□□□□ -0.34
NEK3-206ENST00000611833 A0A096LNT2 108 aa12.91□□□□□ -0.34
NEK3-206ENST00000611833 TRAV12-3A0A0B4J271 114 aa12.91□□□□□ -0.34
NEK3-206ENST00000611833 OCIAD2Q56VL3 154 aa12.91□□□□□ -0.34
NEK3-206ENST00000611833 UFSP1Q6NVU6 142 aa12.91□□□□□ -0.34
NEK3-206ENST00000611833 MAPK1IP1LQ8NDC0 245 aa12.91□□□□□ -0.34
NEK3-206ENST00000611833 FBN2P35556 2912 aa12.91□□□□□ -0.34
NEK3-206ENST00000611833 RNF223E7ERA6 249 aa12.9□□□□□ -0.34
NEK3-206ENST00000611833 K7EP34 96 aa12.9□□□□□ -0.34
NEK3-206ENST00000611833 CD7P09564 240 aa12.9□□□□□ -0.34
NEK3-206ENST00000611833 CDKN1BP46527 198 aa12.9□□□□□ -0.34
NEK3-206ENST00000611833 A0A1W2PPM0 123 aa12.9□□□□□ -0.34
NEK3-206ENST00000611833 NXPH4O95158 308 aa12.9□□□□□ -0.34
NEK3-206ENST00000611833 ZNF688P0C7X2 276 aa12.9□□□□□ -0.34
NEK3-206ENST00000611833 NEXN-AS1Q8NBZ9 246 aa12.9□□□□□ -0.34
NEK3-206ENST00000611833 CEND1Q8N111 149 aa12.89□□□□□ -0.35
NEK3-206ENST00000611833 MYO18BQ8IUG5 2567 aa12.88□□□□□ -0.35
NEK3-206ENST00000611833 PRB1P04280 392 aa12.88□□□□□ -0.35
NEK3-206ENST00000611833 NEGR1Q7Z3B1 354 aa12.88□□□□□ -0.35
NEK3-206ENST00000611833 POM121L12Q8N7R1 296 aa12.88□□□□□ -0.35
NEK3-206ENST00000611833 BAALCQ8WXS3 180 aa12.88□□□□□ -0.35
NEK3-206ENST00000611833 JPT2Q9H910 190 aa12.88□□□□□ -0.35
NEK3-206ENST00000611833 KIF25-AS1Q9Y6Z4 181 aa12.88□□□□□ -0.35
NEK3-206ENST00000611833 ACACBO00763 2458 aa12.88□□□□□ -0.35
NEK3-206ENST00000611833 F5H697 171 aa12.88□□□□□ -0.35
NEK3-206ENST00000611833 TGFAP01135 160 aa12.88□□□□□ -0.35
NEK3-206ENST00000611833 IGKV3-20P01619 116 aa12.88□□□□□ -0.35
NEK3-206ENST00000611833 FABP2P12104 132 aa12.88□□□□□ -0.35
NEK3-206ENST00000611833 SNRPD3P62318 126 aaKnown RBP12.88□□□□□ -0.35
NEK3-206ENST00000611833 SAMD5Q5TGI4 173 aa12.88□□□□□ -0.35
NEK3-206ENST00000611833 TM2D2Q9BX73 214 aa12.88□□□□□ -0.35
NEK3-206ENST00000611833 SPCS1Q9Y6A9 102 aa12.88□□□□□ -0.35
NEK3-206ENST00000611833 OR11H12B2RN74 326 aa12.87□□□□□ -0.35
NEK3-206ENST00000611833 LINC00315P59091 139 aa12.87□□□□□ -0.35
NEK3-206ENST00000611833 OR11H1Q8NG94 326 aa12.87□□□□□ -0.35
NEK3-206ENST00000611833 OR11H2Q8NH07 326 aa12.87□□□□□ -0.35
NEK3-206ENST00000611833 NHP2Q9NX24 153 aaKnown RBP12.87□□□□□ -0.35
NEK3-206ENST00000611833 A0A087WWL8 130 aa12.87□□□□□ -0.35
NEK3-206ENST00000611833 K7ERJ3 54 aa12.87□□□□□ -0.35
NEK3-206ENST00000611833 PCP4P48539 62 aa12.87□□□□□ -0.35
NEK3-206ENST00000611833 ZANQ9Y493 2812 aa12.86□□□□□ -0.35
NEK3-206ENST00000611833 TMEM89A2RUT3 159 aa12.86□□□□□ -0.35
NEK3-206ENST00000611833 MUC4Q99102 2169 aa12.86□□□□□ -0.35
NEK3-206ENST00000611833 IGHV4OR15-8A0A075B7B6 117 aa12.85□□□□□ -0.35
NEK3-206ENST00000611833 A0A087WW49 117 aa12.85□□□□□ -0.35
NEK3-206ENST00000611833 PRSS29PA6NIE9 313 aa12.85□□□□□ -0.35
NEK3-206ENST00000611833 SUMO4Q6EEV6 95 aa12.85□□□□□ -0.35
NEK3-206ENST00000611833 HIST1H4GQ99525 98 aa12.85□□□□□ -0.35
NEK3-206ENST00000611833 CYSLTR1Q9Y271 337 aa12.85□□□□□ -0.35
NEK3-206ENST00000611833 ANKRD17O75179 2603 aaKnown RBP12.85□□□□□ -0.35
NEK3-206ENST00000611833 TRAV12-2A0A075B6T6 113 aa12.85□□□□□ -0.35
NEK3-206ENST00000611833 SYNJ2BPP57105 145 aa12.85□□□□□ -0.35
NEK3-206ENST00000611833 A0A0J9YX75 114 aa12.84□□□□□ -0.35
NEK3-206ENST00000611833 J3QLI3 93 aa12.84□□□□□ -0.35
NEK3-206ENST00000611833 TAL2Q16559 108 aa12.84□□□□□ -0.35
NEK3-206ENST00000611833 OR5A1Q8NGJ0 315 aa12.84□□□□□ -0.35
NEK3-206ENST00000611833 DEFB104AQ8WTQ1 72 aa12.84□□□□□ -0.35
NEK3-206ENST00000611833 MYMXA0A1B0GTQ4 84 aa12.84□□□□□ -0.35
NEK3-206ENST00000611833 K7ERU9 68 aa12.84□□□□□ -0.35
NEK3-206ENST00000611833 DUSP14O95147 198 aaKnown RBP12.84□□□□□ -0.35
NEK3-206ENST00000611833 ODF3Q96PU9 254 aa12.84□□□□□ -0.35
NEK3-206ENST00000611833 VPS25Q9BRG1 176 aa12.84□□□□□ -0.35
NEK3-206ENST00000611833 USP9YO00507 2555 aaPredicted RBP12.84□□□□□ -0.35
NEK3-206ENST00000611833 K7EQG2 157 aa12.83□□□□□ -0.36
NEK3-206ENST00000611833 VCYO14598 125 aa12.83□□□□□ -0.36
NEK3-206ENST00000611833 RPL32P62910 135 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms