RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, human

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11B-205	ENST00000611150	FAM216B	Q8N7L0	139 aa		13.1	□□□□□ -0.31
CDK11B-205	ENST00000611150	CLEC2B	Q92478	149 aa		13.1	□□□□□ -0.31
CDK11B-205	ENST00000611150	CACNA1A	O00555	2505 aa		13.1	□□□□□ -0.31
CDK11B-205	ENST00000611150	IGHV1-45	A0A0A0MS14	117 aa		13.09	□□□□□ -0.31
CDK11B-205	ENST00000611150	EGR2	P11161	476 aa	Predicted RBP	13.09	□□□□□ -0.31
CDK11B-205	ENST00000611150	PMAIP1	Q13794	54 aa		13.09	□□□□□ -0.31
CDK11B-205	ENST00000611150	DAND5	Q8N907	189 aa		13.09	□□□□□ -0.31
CDK11B-205	ENST00000611150	NRAC	Q8N912	160 aa		13.09	□□□□□ -0.31
CDK11B-205	ENST00000611150	SRXN1	Q9BYN0	137 aa		13.09	□□□□□ -0.31
CDK11B-205	ENST00000611150	KNCN	A6PVL3	124 aa		13.09	□□□□□ -0.31
CDK11B-205	ENST00000611150	DEFB119	Q8N690	84 aa		13.09	□□□□□ -0.31
CDK11B-205	ENST00000611150	DSCAML1	Q8TD84	2053 aa		13.09	□□□□□ -0.31
CDK11B-205	ENST00000611150	USP17L23	D6RBM5	183 aa		13.08	□□□□□ -0.32
CDK11B-205	ENST00000611150	CXCL13	O43927	109 aa		13.08	□□□□□ -0.32
CDK11B-205	ENST00000611150	UBE2E1	P51965	193 aa		13.08	□□□□□ -0.32
CDK11B-205	ENST00000611150	RNF182	Q8N6D2	247 aa		13.08	□□□□□ -0.32
CDK11B-205	ENST00000611150	NDUFA4L2	Q9NRX3	87 aa		13.08	□□□□□ -0.32
CDK11B-205	ENST00000611150	PATE3	B3GLJ2	98 aa		13.08	□□□□□ -0.32
CDK11B-205	ENST00000611150	DLX1	P56177	255 aa		13.08	□□□□□ -0.32
CDK11B-205	ENST00000611150	ERCC8	Q13216	396 aa		13.08	□□□□□ -0.32
CDK11B-205	ENST00000611150	PI4KA	P42356	2102 aa		13.07	□□□□□ -0.32
CDK11B-205	ENST00000611150	TRBV19	A0A075B6N1	114 aa		13.07	□□□□□ -0.32
CDK11B-205	ENST00000611150	IGLV3-19	P01714	112 aa		13.07	□□□□□ -0.32
CDK11B-205	ENST00000611150	TSPEAR-AS2	P59090	65 aa		13.07	□□□□□ -0.32
CDK11B-205	ENST00000611150	FP248	Q71RG6	208 aa	Predicted RBP	13.07	□□□□□ -0.32
CDK11B-205	ENST00000611150	COPS9	Q8WXC6	57 aa		13.07	□□□□□ -0.32
CDK11B-205	ENST00000611150	TRGV5	A0A0B4J1U4	118 aa		13.07	□□□□□ -0.32
CDK11B-205	ENST00000611150	C11orf86	A6NJI1	115 aa		13.07	□□□□□ -0.32
CDK11B-205	ENST00000611150	AMELX	Q99217	191 aa		13.07	□□□□□ -0.32
CDK11B-205	ENST00000611150	MRPL36	Q9P0J6	103 aa	Known RBP	13.07	□□□□□ -0.32
CDK11B-205	ENST00000611150	FER1L5	A0AVI2	2057 aa		13.07	□□□□□ -0.32
CDK11B-205	ENST00000611150	PRSS2	P07478	247 aa		13.06	□□□□□ -0.32
CDK11B-205	ENST00000611150	MRPS36	P82909	103 aa	Known RBP	13.06	□□□□□ -0.32
CDK11B-205	ENST00000611150	DCTN5	Q9BTE1	182 aa		13.06	□□□□□ -0.32
CDK11B-205	ENST00000611150	C1orf229	Q6ZS94	237 aa	Predicted RBP	13.06	□□□□□ -0.32
CDK11B-205	ENST00000611150	COX8C	Q7Z4L0	72 aa		13.06	□□□□□ -0.32
CDK11B-205	ENST00000611150	FAM223A	Q8IWN6	122 aa		13.06	□□□□□ -0.32
CDK11B-205	ENST00000611150	SMIM2	Q9BVW6	85 aa		13.06	□□□□□ -0.32
CDK11B-205	ENST00000611150	SLC50A1	Q9BRV3	221 aa		13.05	□□□□□ -0.32
CDK11B-205	ENST00000611150	IGHV5-51	A0A0C4DH38	117 aa		13.05	□□□□□ -0.32
CDK11B-205	ENST00000611150	GRP	P07492	148 aa		13.05	□□□□□ -0.32
CDK11B-205	ENST00000611150	SEC16A	O15027	2179 aa		13.04	□□□□□ -0.32
CDK11B-205	ENST00000611150		A0A096LPE4	126 aa		13.04	□□□□□ -0.32
CDK11B-205	ENST00000611150	IGHV3-64D	A0A0J9YX35	117 aa		13.04	□□□□□ -0.32
CDK11B-205	ENST00000611150		A0A1W2PPZ6	126 aa		13.04	□□□□□ -0.32
CDK11B-205	ENST00000611150	BUB3	O43684	328 aa		13.04	□□□□□ -0.32
CDK11B-205	ENST00000611150	SCRG1	O75711	98 aa		13.04	□□□□□ -0.32
CDK11B-205	ENST00000611150	SAA2	P0DJI9	122 aa	Predicted RBP	13.04	□□□□□ -0.32
CDK11B-205	ENST00000611150	LIF	P15018	202 aa		13.04	□□□□□ -0.32
CDK11B-205	ENST00000611150	FAM201A	Q5SY85	155 aa		13.04	□□□□□ -0.32
CDK11B-205	ENST00000611150	C2orf66	Q6UXQ4	117 aa		13.03	□□□□□ -0.32
CDK11B-205	ENST00000611150	NUP37	Q8NFH4	326 aa		13.03	□□□□□ -0.32
CDK11B-205	ENST00000611150	IGHG2	P01859	326 aa		13.03	□□□□□ -0.32
CDK11B-205	ENST00000611150	INAFM2	P0DMQ5	153 aa		13.03	□□□□□ -0.32
CDK11B-205	ENST00000611150	SLC25A15	Q9Y619	301 aa		13.03	□□□□□ -0.32
CDK11B-205	ENST00000611150	IGHV4-34	P06331	123 aa		13.02	□□□□□ -0.32
CDK11B-205	ENST00000611150	SAA1	P0DJI8	122 aa	Predicted RBP	13.02	□□□□□ -0.32
CDK11B-205	ENST00000611150	CD164	Q04900	197 aa		13.02	□□□□□ -0.32
CDK11B-205	ENST00000611150	SPTBN2	O15020	2390 aa		13.02	□□□□□ -0.33
CDK11B-205	ENST00000611150	IGLV4-69	A0A075B6H9	119 aa		13.02	□□□□□ -0.33
CDK11B-205	ENST00000611150	DAZ4	Q86SG3	579 aa	Known RBP	13.02	□□□□□ -0.33
CDK11B-205	ENST00000611150	DAZ1	Q9NQZ3	744 aa	Known RBP	13.02	□□□□□ -0.33
CDK11B-205	ENST00000611150	CNOT1	A5YKK6	2376 aa	Known RBP	13.02	□□□□□ -0.33
CDK11B-205	ENST00000611150	TRAV26-2	A0A0B4J265	109 aa		13.01	□□□□□ -0.33
CDK11B-205	ENST00000611150	TNC	P24821	2201 aa		13.01	□□□□□ -0.33
CDK11B-205	ENST00000611150	IGHV3-9	P01782	118 aa		13.01	□□□□□ -0.33
CDK11B-205	ENST00000611150	LYZ	P61626	148 aa		13.01	□□□□□ -0.33
CDK11B-205	ENST00000611150		Q6JHZ5	121 aa		13.01	□□□□□ -0.33
CDK11B-205	ENST00000611150	CACNA1E	Q15878	2313 aa		13	□□□□□ -0.33
CDK11B-205	ENST00000611150		I3L3M4	83 aa		13	□□□□□ -0.33
CDK11B-205	ENST00000611150	WT1-AS	Q06250	92 aa		13	□□□□□ -0.33
CDK11B-205	ENST00000611150	FAM223B	A6NKX1	122 aa		13	□□□□□ -0.33
CDK11B-205	ENST00000611150	GFRAL	Q6UXV0	394 aa		13	□□□□□ -0.33
CDK11B-205	ENST00000611150	DYNAP	Q8N1N2	210 aa		13	□□□□□ -0.33
CDK11B-205	ENST00000611150		Q96MF0	132 aa		13	□□□□□ -0.33
CDK11B-205	ENST00000611150	NCOR2	Q9Y618	2525 aa		13	□□□□□ -0.33
CDK11B-205	ENST00000611150	TFF1	P04155	84 aa		12.99	□□□□□ -0.33
CDK11B-205	ENST00000611150	IGKV1-16	P04430	117 aa		12.99	□□□□□ -0.33
CDK11B-205	ENST00000611150	PRB4	P10163	310 aa	Predicted RBP	12.99	□□□□□ -0.33
CDK11B-205	ENST00000611150	DAZ2	Q13117	558 aa	Known RBP	12.99	□□□□□ -0.33
CDK11B-205	ENST00000611150	DAZ3	Q9NR90	486 aa	Known RBP	12.99	□□□□□ -0.33
CDK11B-205	ENST00000611150	RBMY1B	A6NDE4	496 aa	Known RBP	12.99	□□□□□ -0.33
CDK11B-205	ENST00000611150	RBMY1E	A6NEQ0	496 aa	Known RBP	12.99	□□□□□ -0.33
CDK11B-205	ENST00000611150	RBMY1D	P0C7P1	496 aa	Known RBP	12.99	□□□□□ -0.33
CDK11B-205	ENST00000611150	RBMY1A1	P0DJD3	496 aa	Known RBP	12.99	□□□□□ -0.33
CDK11B-205	ENST00000611150	RBMY1C	P0DJD4	496 aa		12.99	□□□□□ -0.33
CDK11B-205	ENST00000611150	RBMY1F	Q15415	496 aa	Known RBP	12.99	□□□□□ -0.33
CDK11B-205	ENST00000611150	ZNF491	Q8N8L2	437 aa		12.98	□□□□□ -0.33
CDK11B-205	ENST00000611150	DEFB126	Q9BYW3	111 aa		12.98	□□□□□ -0.33
CDK11B-205	ENST00000611150	TRGV3	P03979	118 aa		12.97	□□□□□ -0.33
CDK11B-205	ENST00000611150	ZNF575	Q86XF7	245 aa		12.97	□□□□□ -0.33
CDK11B-205	ENST00000611150		A0A087WVE0	104 aa		12.96	□□□□□ -0.33
CDK11B-205	ENST00000611150	IGKV3D-7	A0A0C4DH55	119 aa		12.96	□□□□□ -0.33
CDK11B-205	ENST00000611150	SDHAF1	A6NFY7	115 aa		12.96	□□□□□ -0.33
CDK11B-205	ENST00000611150	CIRBP	Q14011	172 aa	Known RBP	12.96	□□□□□ -0.33
CDK11B-205	ENST00000611150	LEPROT	O15243	131 aa		12.96	□□□□□ -0.33
CDK11B-205	ENST00000611150	LEAP2	Q969E1	77 aa		12.96	□□□□□ -0.33
CDK11B-205	ENST00000611150		E7EUB6	86 aa		12.95	□□□□□ -0.34
CDK11B-205	ENST00000611150	XCL1	P47992	114 aa		12.95	□□□□□ -0.34
CDK11B-205	ENST00000611150	ZNF80	P51504	273 aa	Predicted RBP	12.95	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms