RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 PTTG1IPP53801 180 aa7.82□□□□□ -1.16
PABPC1-224ENST00000610907 DEFB1P60022 68 aa7.82□□□□□ -1.16
PABPC1-224ENST00000610907 WFDC3Q8IUB2 231 aa7.82□□□□□ -1.16
PABPC1-224ENST00000610907 C14orf178Q8N769 122 aaPredicted RBP7.82□□□□□ -1.16
PABPC1-224ENST00000610907 FOXC2Q99958 501 aa7.82□□□□□ -1.16
PABPC1-224ENST00000610907 ZNF702PQ9H963 129 aa7.82□□□□□ -1.16
PABPC1-224ENST00000610907 HIGD1BQ9P298 99 aa7.82□□□□□ -1.16
PABPC1-224ENST00000610907 TP73-AS1Q9UF72 201 aa7.82□□□□□ -1.16
PABPC1-224ENST00000610907 PLNP26678 52 aa7.81□□□□□ -1.16
PABPC1-224ENST00000610907 Q8N2B8 174 aa7.81□□□□□ -1.16
PABPC1-224ENST00000610907 TEX29Q8N6K0 151 aa7.81□□□□□ -1.16
PABPC1-224ENST00000610907 TOMM6Q96B49 74 aa7.81□□□□□ -1.16
PABPC1-224ENST00000610907 KIF25-AS1Q9Y6Z4 181 aa7.81□□□□□ -1.16
PABPC1-224ENST00000610907 SVEP1Q4LDE5 3571 aa7.81□□□□□ -1.16
PABPC1-224ENST00000610907 CSPG4Q6UVK1 2322 aa7.8□□□□□ -1.16
PABPC1-224ENST00000610907 A6NDN8 102 aa7.8□□□□□ -1.16
PABPC1-224ENST00000610907 NMUP48645 174 aa7.8□□□□□ -1.16
PABPC1-224ENST00000610907 C10orf99Q6UWK7 81 aa7.8□□□□□ -1.16
PABPC1-224ENST00000610907 COL12A1Q99715 3063 aa7.8□□□□□ -1.16
PABPC1-224ENST00000610907 MYO18BQ8IUG5 2567 aa7.8□□□□□ -1.16
PABPC1-224ENST00000610907 H7C1H1 209 aa7.8□□□□□ -1.16
PABPC1-224ENST00000610907 MGPP08493 103 aa7.8□□□□□ -1.16
PABPC1-224ENST00000610907 ZNF688P0C7X2 276 aa7.8□□□□□ -1.16
PABPC1-224ENST00000610907 EDN2P20800 178 aa7.8□□□□□ -1.16
PABPC1-224ENST00000610907 SYNJ2BPP57105 145 aa7.8□□□□□ -1.16
PABPC1-224ENST00000610907 LINC00315P59091 139 aa7.8□□□□□ -1.16
PABPC1-224ENST00000610907 ADAMTSL5Q6ZMM2 481 aa7.8□□□□□ -1.16
PABPC1-224ENST00000610907 FOXI2Q6ZQN5 318 aa7.8□□□□□ -1.16
PABPC1-224ENST00000610907 TRAV2A0A0B4J234 112 aa7.79□□□□□ -1.16
PABPC1-224ENST00000610907 TRAV12-3A0A0B4J271 114 aa7.79□□□□□ -1.16
PABPC1-224ENST00000610907 CCL25O15444 150 aa7.79□□□□□ -1.16
PABPC1-224ENST00000610907 HOXA3O43365 443 aaPredicted RBP7.79□□□□□ -1.16
PABPC1-224ENST00000610907 CD7P09564 240 aa7.79□□□□□ -1.16
PABPC1-224ENST00000610907 PLA2G2AP14555 144 aa7.79□□□□□ -1.16
PABPC1-224ENST00000610907 HOXD3P31249 432 aaPredicted RBP7.79□□□□□ -1.16
PABPC1-224ENST00000610907 CDKN1BP46527 198 aa7.79□□□□□ -1.16
PABPC1-224ENST00000610907 VAMP3Q15836 100 aa7.79□□□□□ -1.16
PABPC1-224ENST00000610907 Q5PR19 223 aa7.79□□□□□ -1.16
PABPC1-224ENST00000610907 SYT8Q8NBV8 401 aa7.79□□□□□ -1.16
PABPC1-224ENST00000610907 MAPK1IP1LQ8NDC0 245 aa7.79□□□□□ -1.16
PABPC1-224ENST00000610907 C9orf85Q96MD7 179 aa7.79□□□□□ -1.16
PABPC1-224ENST00000610907 SCGB3A1Q96QR1 104 aa7.79□□□□□ -1.16
PABPC1-224ENST00000610907 MRPL35Q9NZE8 188 aaKnown RBP7.79□□□□□ -1.16
PABPC1-224ENST00000610907 ZNF462Q96JM2 2506 aa7.79□□□□□ -1.16
PABPC1-224ENST00000610907 GCN1Q92616 2671 aaKnown RBP7.79□□□□□ -1.16
PABPC1-224ENST00000610907 PRRC2AP48634 2157 aaKnown RBP7.78□□□□□ -1.16
PABPC1-224ENST00000610907 F8VRH5 84 aa7.78□□□□□ -1.16
PABPC1-224ENST00000610907 H3BRM9 83 aa7.78□□□□□ -1.16
PABPC1-224ENST00000610907 ZC2HC1BQ5TFG8 222 aa7.78□□□□□ -1.16
PABPC1-224ENST00000610907 ERASQ7Z444 233 aa7.78□□□□□ -1.16
PABPC1-224ENST00000610907 PCP2Q8IVA1 136 aa7.78□□□□□ -1.16
PABPC1-224ENST00000610907 TMEM86BQ8N661 226 aa7.78□□□□□ -1.16
PABPC1-224ENST00000610907 RPL39LQ96EH5 51 aaKnown RBP7.78□□□□□ -1.16
PABPC1-224ENST00000610907 ANKRD17O75179 2603 aaKnown RBP7.77□□□□□ -1.17
PABPC1-224ENST00000610907 IGHV1OR15-1A0A075B7D0 117 aa7.77□□□□□ -1.17
PABPC1-224ENST00000610907 IGHV3-16A0A0C4DH30 117 aa7.77□□□□□ -1.17
PABPC1-224ENST00000610907 TRBV6-5A0A0K0K1A5 114 aa7.77□□□□□ -1.17
PABPC1-224ENST00000610907 CBY3A6NI87 242 aa7.77□□□□□ -1.17
PABPC1-224ENST00000610907 VCYO14598 125 aa7.77□□□□□ -1.17
PABPC1-224ENST00000610907 FOSL1P15407 271 aa7.77□□□□□ -1.17
PABPC1-224ENST00000610907 POLR2KP53803 58 aaKnown RBP7.77□□□□□ -1.17
PABPC1-224ENST00000610907 C2orf66Q6UXQ4 117 aa7.77□□□□□ -1.17
PABPC1-224ENST00000610907 Q6ZVH6 145 aa7.77□□□□□ -1.17
PABPC1-224ENST00000610907 NEXN-AS1Q8NBZ9 246 aa7.77□□□□□ -1.17
PABPC1-224ENST00000610907 CSTL1Q9H114 145 aa7.77□□□□□ -1.17
PABPC1-224ENST00000610907 TMEM160Q9NX00 188 aa7.77□□□□□ -1.17
PABPC1-224ENST00000610907 KRTAP10-9P60411 292 aa7.76□□□□□ -1.17
PABPC1-224ENST00000610907 TCTEX1D4Q5JR98 221 aa7.76□□□□□ -1.17
PABPC1-224ENST00000610907 GTSCR1Q86UQ5 136 aa7.76□□□□□ -1.17
PABPC1-224ENST00000610907 PEMTQ9UBM1 199 aa7.76□□□□□ -1.17
PABPC1-224ENST00000610907 CHTOPQ9Y3Y2 248 aaKnown RBP7.76□□□□□ -1.17
PABPC1-224ENST00000610907 TRGV11A0A075B6L2 103 aa7.76□□□□□ -1.17
PABPC1-224ENST00000610907 IGKV2D-26A0A0A0MRZ7 120 aa7.76□□□□□ -1.17
PABPC1-224ENST00000610907 A8MTW9 85 aa7.76□□□□□ -1.17
PABPC1-224ENST00000610907 LINC01619G3V211 115 aa7.76□□□□□ -1.17
PABPC1-224ENST00000610907 SPRY2O43597 315 aa7.76□□□□□ -1.17
PABPC1-224ENST00000610907 TAL2Q16559 108 aa7.76□□□□□ -1.17
PABPC1-224ENST00000610907 SUMO4Q6EEV6 95 aa7.76□□□□□ -1.17
PABPC1-224ENST00000610907 AMTNQ6UX39 209 aa7.76□□□□□ -1.17
PABPC1-224ENST00000610907 WFDC12Q8WWY7 111 aa7.76□□□□□ -1.17
PABPC1-224ENST00000610907 Q96MF0 132 aa7.76□□□□□ -1.17
PABPC1-224ENST00000610907 KIR2DL4Q99706 377 aa7.76□□□□□ -1.17
PABPC1-224ENST00000610907 CYSLTR1Q9Y271 337 aa7.76□□□□□ -1.17
PABPC1-224ENST00000610907 TENM4Q6N022 2769 aa7.76□□□□□ -1.17
PABPC1-224ENST00000610907 CR1P17927 2039 aa7.75□□□□□ -1.17
PABPC1-224ENST00000610907 MUC4Q99102 2169 aa7.75□□□□□ -1.17
PABPC1-224ENST00000610907 USP9YO00507 2555 aaPredicted RBP7.75□□□□□ -1.17
PABPC1-224ENST00000610907 TRBV27A0A0K0K1C4 114 aa7.75□□□□□ -1.17
PABPC1-224ENST00000610907 C9orf118A6NHY6 69 aa7.75□□□□□ -1.17
PABPC1-224ENST00000610907 J3QKU1 62 aa7.75□□□□□ -1.17
PABPC1-224ENST00000610907 K7EP13 123 aa7.75□□□□□ -1.17
PABPC1-224ENST00000610907 PAPPA-AS1Q5QFB9 102 aa7.75□□□□□ -1.17
PABPC1-224ENST00000610907 OR4C5Q8NGB2 326 aa7.75□□□□□ -1.17
PABPC1-224ENST00000610907 C4orf3Q8WVX3 66 aa7.75□□□□□ -1.17
PABPC1-224ENST00000610907 TMEM141Q96I45 108 aa7.75□□□□□ -1.17
PABPC1-224ENST00000610907 SELENOKQ9Y6D0 94 aa7.75□□□□□ -1.17
PABPC1-224ENST00000610907 FASNP49327 2511 aaKnown RBP7.75□□□□□ -1.17
PABPC1-224ENST00000610907 UBR5O95071 2799 aaPredicted RBP7.74□□□□□ -1.17
PABPC1-224ENST00000610907 TRBV25-1A0A075B6N4 114 aa7.74□□□□□ -1.17
PABPC1-224ENST00000610907 RIPPLY3P57055 190 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms