RNA–Protein interactions for RNA: ENST00000608158.5

CTCFL-215, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-215ENST00000608158 M0R381 172 aa12.18□□□□□ -0.46
CTCFL-215ENST00000608158 SPRY2O43597 315 aa12.18□□□□□ -0.46
CTCFL-215ENST00000608158 SMIM6P0DI80 62 aa12.18□□□□□ -0.46
CTCFL-215ENST00000608158 CMC4P56277 68 aaPredicted RBP12.18□□□□□ -0.46
CTCFL-215ENST00000608158 TRPT1Q86TN4 253 aaKnown RBP12.18□□□□□ -0.46
CTCFL-215ENST00000608158 STHQ8IWL8 128 aa12.18□□□□□ -0.46
CTCFL-215ENST00000608158 FAM110AQ9BQ89 295 aa12.18□□□□□ -0.46
CTCFL-215ENST00000608158 U3KQK5 164 aa12.18□□□□□ -0.46
CTCFL-215ENST00000608158 TEP1Q99973 2627 aaKnown RBP12.18□□□□□ -0.46
CTCFL-215ENST00000608158 IGHV3-16A0A0C4DH30 117 aa12.18□□□□□ -0.46
CTCFL-215ENST00000608158 NXPH4O95158 308 aa12.18□□□□□ -0.46
CTCFL-215ENST00000608158 EVI2AP22794 236 aa12.18□□□□□ -0.46
CTCFL-215ENST00000608158 KRTAP24-1Q3LI83 254 aa12.18□□□□□ -0.46
CTCFL-215ENST00000608158 SMIM15Q7Z3B0 74 aa12.18□□□□□ -0.46
CTCFL-215ENST00000608158 LINC00518Q8N0U6 118 aa12.18□□□□□ -0.46
CTCFL-215ENST00000608158 ORMDL3Q8N138 153 aa12.18□□□□□ -0.46
CTCFL-215ENST00000608158 SPATA3Q8NHX4 192 aa12.18□□□□□ -0.46
CTCFL-215ENST00000608158 Q8N1Y9 231 aa12.17□□□□□ -0.46
CTCFL-215ENST00000608158 RAB4AP20338 218 aa12.16□□□□□ -0.46
CTCFL-215ENST00000608158 C9orf85Q96MD7 179 aa12.16□□□□□ -0.46
CTCFL-215ENST00000608158 C19orf73Q9NVV2 129 aa12.16□□□□□ -0.46
CTCFL-215ENST00000608158 NCR2O95944 276 aa12.16□□□□□ -0.46
CTCFL-215ENST00000608158 INSP01308 110 aa12.16□□□□□ -0.46
CTCFL-215ENST00000608158 RNASEKQ6P5S7 137 aaKnown RBP12.16□□□□□ -0.46
CTCFL-215ENST00000608158 URB1-AS1Q96HZ7 61 aa12.16□□□□□ -0.46
CTCFL-215ENST00000608158 PRELID3AQ96N28 172 aa12.16□□□□□ -0.46
CTCFL-215ENST00000608158 SAMD10Q9BYL1 202 aa12.16□□□□□ -0.46
CTCFL-215ENST00000608158 WFDC10AQ9H1F0 79 aa12.16□□□□□ -0.46
CTCFL-215ENST00000608158 TRGV11A0A075B6L2 103 aa12.15□□□□□ -0.46
CTCFL-215ENST00000608158 SMKR1H3BMG3 65 aa12.14□□□□□ -0.47
CTCFL-215ENST00000608158 PMCHP20382 165 aa12.14□□□□□ -0.47
CTCFL-215ENST00000608158 CKS2P33552 79 aa12.14□□□□□ -0.47
CTCFL-215ENST00000608158 INSL3P51460 131 aa12.14□□□□□ -0.47
CTCFL-215ENST00000608158 C9orf66Q5T8R8 295 aa12.14□□□□□ -0.47
CTCFL-215ENST00000608158 AP1S3Q96PC3 154 aa12.14□□□□□ -0.47
CTCFL-215ENST00000608158 MDFICQ9P1T7 246 aa12.14□□□□□ -0.47
CTCFL-215ENST00000608158 NIPBLQ6KC79 2804 aaeCLIP12.14□□□□□ -0.476e-7■■□□□ 12.1
CTCFL-215ENST00000608158 CBY3A6NI87 242 aa12.14□□□□□ -0.47
CTCFL-215ENST00000608158 PPBPP02775 128 aa12.14□□□□□ -0.47
CTCFL-215ENST00000608158 AMTP48728 403 aa12.14□□□□□ -0.47
CTCFL-215ENST00000608158 C12orf57Q99622 126 aa12.14□□□□□ -0.47
CTCFL-215ENST00000608158 C20orf144Q9BQM9 153 aa12.14□□□□□ -0.47
CTCFL-215ENST00000608158 TENM1Q9UKZ4 2725 aa12.14□□□□□ -0.47
CTCFL-215ENST00000608158 ATRQ13535 2644 aa12.13□□□□□ -0.47
CTCFL-215ENST00000608158 HSBP1O75506 76 aa12.13□□□□□ -0.47
CTCFL-215ENST00000608158 PYY3Q5JQD4 70 aa12.13□□□□□ -0.47
CTCFL-215ENST00000608158 NIT1Q86X76 327 aa12.13□□□□□ -0.47
CTCFL-215ENST00000608158 NPYP01303 97 aa12.12□□□□□ -0.47
CTCFL-215ENST00000608158 CHCHD1Q96BP2 118 aaKnown RBP12.12□□□□□ -0.47
CTCFL-215ENST00000608158 DPH3P1Q9H4G8 78 aa12.12□□□□□ -0.47
CTCFL-215ENST00000608158 XCL2Q9UBD3 114 aa12.12□□□□□ -0.47
CTCFL-215ENST00000608158 GAS8-AS1O95177 125 aa12.11□□□□□ -0.47
CTCFL-215ENST00000608158 NUTF2P61970 127 aaKnown RBP12.11□□□□□ -0.47
CTCFL-215ENST00000608158 LINC00467Q9BRT7 94 aa12.11□□□□□ -0.47
CTCFL-215ENST00000608158 LAMTOR2Q9Y2Q5 125 aa12.11□□□□□ -0.47
CTCFL-215ENST00000608158 FAM19A2Q8N3H0 131 aa12.1□□□□□ -0.47
CTCFL-215ENST00000608158 C14orf178Q8N769 122 aaPredicted RBP12.1□□□□□ -0.47
CTCFL-215ENST00000608158 LINC00614P0C842 121 aa12.1□□□□□ -0.47
CTCFL-215ENST00000608158 HTN1P15515 57 aa12.1□□□□□ -0.47
CTCFL-215ENST00000608158 Q6ZWC4 215 aa12.1□□□□□ -0.47
CTCFL-215ENST00000608158 SYT8Q8NBV8 401 aa12.1□□□□□ -0.47
CTCFL-215ENST00000608158 TRAV26-2A0A0B4J265 109 aa12.09□□□□□ -0.47
CTCFL-215ENST00000608158 PRIMA1Q86XR5 153 aa12.09□□□□□ -0.47
CTCFL-215ENST00000608158 MRAP2Q96G30 205 aa12.09□□□□□ -0.47
CTCFL-215ENST00000608158 LINC01587Q99440 93 aa12.09□□□□□ -0.47
CTCFL-215ENST00000608158 MUC4Q99102 2169 aa12.09□□□□□ -0.47
CTCFL-215ENST00000608158 GATA1P15976 413 aaPredicted RBP12.09□□□□□ -0.47
CTCFL-215ENST00000608158 FA2HQ7L5A8 372 aa12.09□□□□□ -0.47
CTCFL-215ENST00000608158 MCRIP2Q9BUT9 160 aaKnown RBP12.09□□□□□ -0.47
CTCFL-215ENST00000608158 TNFRSF6BO95407 300 aa12.08□□□□□ -0.48
CTCFL-215ENST00000608158 MGPP08493 103 aa12.08□□□□□ -0.48
CTCFL-215ENST00000608158 ZNF415Q09FC8 603 aa12.08□□□□□ -0.48
CTCFL-215ENST00000608158 JOSD1Q15040 202 aaPredicted RBP12.08□□□□□ -0.48
CTCFL-215ENST00000608158 GTSCR1Q86UQ5 136 aa12.08□□□□□ -0.48
CTCFL-215ENST00000608158 C1orf158Q8N1D5 194 aa12.08□□□□□ -0.48
CTCFL-215ENST00000608158 PRSS3P2Q8NHM4 247 aa12.08□□□□□ -0.48
CTCFL-215ENST00000608158 ZNF747Q9BV97 191 aa12.08□□□□□ -0.48
CTCFL-215ENST00000608158 MAP1LC3AQ9H492 121 aa12.08□□□□□ -0.48
CTCFL-215ENST00000608158 AP5S1Q9NUS5 200 aa12.08□□□□□ -0.48
CTCFL-215ENST00000608158 KIF25-AS1Q9Y6Z4 181 aa12.08□□□□□ -0.48
CTCFL-215ENST00000608158 IGHV1-24A0A0C4DH33 117 aa12.07□□□□□ -0.48
CTCFL-215ENST00000608158 LOC389332A0A1B0GUA5 103 aa12.07□□□□□ -0.48
CTCFL-215ENST00000608158 RPL35AP18077 110 aaKnown RBP12.07□□□□□ -0.48
CTCFL-215ENST00000608158 IFI27P40305 119 aaPredicted RBP12.07□□□□□ -0.48
CTCFL-215ENST00000608158 NRACQ8N912 160 aa12.07□□□□□ -0.48
CTCFL-215ENST00000608158 WFDC9Q8NEX5 89 aa12.07□□□□□ -0.48
CTCFL-215ENST00000608158 PRM2P04554 102 aa12.07□□□□□ -0.48
CTCFL-215ENST00000608158 GIG44P09565 113 aaPredicted RBP12.07□□□□□ -0.48
CTCFL-215ENST00000608158 PMCHL1Q16048 86 aa12.07□□□□□ -0.48
CTCFL-215ENST00000608158 DEFB125Q8N687 156 aa12.07□□□□□ -0.48
CTCFL-215ENST00000608158 TMEM208Q9BTX3 173 aa12.07□□□□□ -0.48
CTCFL-215ENST00000608158 JPT2Q9H910 190 aa12.07□□□□□ -0.48
CTCFL-215ENST00000608158 GSN-AS1Q9NRJ2 163 aa12.07□□□□□ -0.48
CTCFL-215ENST00000608158 VWFP04275 2813 aa12.06□□□□□ -0.48
CTCFL-215ENST00000608158 SMIM17P0DL12 118 aa12.06□□□□□ -0.48
CTCFL-215ENST00000608158 CDPF1Q6NVV7 123 aa12.06□□□□□ -0.48
CTCFL-215ENST00000608158 C11orf72Q8NBR9 251 aa12.06□□□□□ -0.48
CTCFL-215ENST00000608158 LINC00315P59091 139 aa12.05□□□□□ -0.48
CTCFL-215ENST00000608158 ZNF876PQ49A33 203 aa12.05□□□□□ -0.48
CTCFL-215ENST00000608158 POM121L12Q8N7R1 296 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms