RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 IFNA7P01567 189 aa9.94□□□□□ -0.82
CTSA-216ENST00000607212 RAB2AP61019 212 aa9.94□□□□□ -0.82
CTSA-216ENST00000607212 CLLU1Q5K131 121 aa9.94□□□□□ -0.82
CTSA-216ENST00000607212 CFAP126Q5VTH2 177 aa9.94□□□□□ -0.82
CTSA-216ENST00000607212 OR10G9Q8NGN4 311 aa9.94□□□□□ -0.82
CTSA-216ENST00000607212 OR10G7Q8NGN6 311 aa9.94□□□□□ -0.82
CTSA-216ENST00000607212 TVP23CQ96ET8 276 aa9.94□□□□□ -0.82
CTSA-216ENST00000607212 TRBV6-4A0A1B0GX49 114 aa9.93□□□□□ -0.82
CTSA-216ENST00000607212 TAAR5O14804 337 aa9.93□□□□□ -0.82
CTSA-216ENST00000607212 CIDEAO60543 219 aa9.93□□□□□ -0.82
CTSA-216ENST00000607212 TMUB2Q71RG4 321 aa9.93□□□□□ -0.82
CTSA-216ENST00000607212 GTSF1LQ9H1H1 148 aa9.93□□□□□ -0.82
CTSA-216ENST00000607212 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.92□□□□□ -0.82
CTSA-216ENST00000607212 LECT2O14960 151 aa9.92□□□□□ -0.82
CTSA-216ENST00000607212 GCGP01275 180 aa9.92□□□□□ -0.82
CTSA-216ENST00000607212 PLA2G1BP04054 148 aaKnown RBP9.92□□□□□ -0.82
CTSA-216ENST00000607212 ARL14EPLP0DKL9 152 aa9.92□□□□□ -0.82
CTSA-216ENST00000607212 PRNTQ86SH4 94 aa9.92□□□□□ -0.82
CTSA-216ENST00000607212 TMEM75Q8N9X5 138 aa9.92□□□□□ -0.82
CTSA-216ENST00000607212 SH3BGRL3Q9H299 93 aa9.92□□□□□ -0.82
CTSA-216ENST00000607212 FXYD6-FXYD2A0A087WZ82 144 aa9.91□□□□□ -0.82
CTSA-216ENST00000607212 SERTM2A0A1B0GWG4 89 aa9.91□□□□□ -0.82
CTSA-216ENST00000607212 GAGE12JA6NER3 117 aa9.91□□□□□ -0.82
CTSA-216ENST00000607212 ARPC5O15511 151 aa9.91□□□□□ -0.82
CTSA-216ENST00000607212 MGST1P10620 155 aaKnown RBP9.91□□□□□ -0.82
CTSA-216ENST00000607212 S100A4P26447 101 aaKnown RBP9.91□□□□□ -0.82
CTSA-216ENST00000607212 CDC34P49427 236 aaPredicted RBP9.91□□□□□ -0.82
CTSA-216ENST00000607212 GAGE1Q13065 139 aa9.91□□□□□ -0.82
CTSA-216ENST00000607212 GAGE4Q13068 117 aa9.91□□□□□ -0.82
CTSA-216ENST00000607212 GAGE5Q13069 117 aa9.91□□□□□ -0.82
CTSA-216ENST00000607212 GAGE13Q4V321 117 aa9.91□□□□□ -0.82
CTSA-216ENST00000607212 SMUG1Q53HV7 270 aa9.91□□□□□ -0.82
CTSA-216ENST00000607212 ZNF506Q5JVG8 444 aa9.91□□□□□ -0.82
CTSA-216ENST00000607212 DPPA3Q6W0C5 159 aa9.91□□□□□ -0.82
CTSA-216ENST00000607212 ARL6IP6Q8N6S5 226 aa9.91□□□□□ -0.82
CTSA-216ENST00000607212 WFDC1Q9HC57 220 aa9.91□□□□□ -0.82
CTSA-216ENST00000607212 FAM30AQ9NZY2 134 aa9.91□□□□□ -0.82
CTSA-216ENST00000607212 PSG8Q9UQ74 426 aa9.91□□□□□ -0.82
CTSA-216ENST00000607212 FAT1Q14517 4588 aa9.91□□□□□ -0.82
CTSA-216ENST00000607212 PGPEP1LA6NFU8 196 aa9.9□□□□□ -0.82
CTSA-216ENST00000607212 ZNF80P51504 273 aaPredicted RBP9.9□□□□□ -0.82
CTSA-216ENST00000607212 LAGE3Q14657 143 aa9.9□□□□□ -0.82
CTSA-216ENST00000607212 TOR2AQ5JU69 321 aa9.9□□□□□ -0.82
CTSA-216ENST00000607212 C5orf17Q8NAS9 161 aa9.9□□□□□ -0.82
CTSA-216ENST00000607212 TRAV8-3A0A0A6YYJ7 113 aa9.89□□□□□ -0.83
CTSA-216ENST00000607212 TCRAP04437 139 aa9.89□□□□□ -0.83
CTSA-216ENST00000607212 LINC00528Q8N1L1 170 aa9.89□□□□□ -0.83
CTSA-216ENST00000607212 HSD17B11Q8NBQ5 300 aa9.89□□□□□ -0.83
CTSA-216ENST00000607212 C11orf21Q9P2W6 132 aa9.89□□□□□ -0.83
CTSA-216ENST00000607212 URGCP-MRPS24S4R325 110 aa9.89□□□□□ -0.83
CTSA-216ENST00000607212 GGTLC3B5MD39 225 aa9.88□□□□□ -0.83
CTSA-216ENST00000607212 FLI1Q01543 452 aaPredicted RBP9.88□□□□□ -0.83
CTSA-216ENST00000607212 WFDC2Q14508 124 aa9.88□□□□□ -0.83
CTSA-216ENST00000607212 COMMD7Q86VX2 200 aa9.88□□□□□ -0.83
CTSA-216ENST00000607212 Q8N3U1 123 aa9.88□□□□□ -0.83
CTSA-216ENST00000607212 C9orf85Q96MD7 179 aa9.88□□□□□ -0.83
CTSA-216ENST00000607212 GCHFRP30047 84 aa9.87□□□□□ -0.83
CTSA-216ENST00000607212 RAB14P61106 215 aa9.87□□□□□ -0.83
CTSA-216ENST00000607212 SUMO1P63165 101 aaKnown RBP9.87□□□□□ -0.83
CTSA-216ENST00000607212 KCNRGQ8N5I3 272 aa9.87□□□□□ -0.83
CTSA-216ENST00000607212 TNFSF18Q9UNG2 199 aa9.87□□□□□ -0.83
CTSA-216ENST00000607212 RBFOX3A6NFN3 312 aa9.86□□□□□ -0.83
CTSA-216ENST00000607212 A8MWV9 139 aa9.86□□□□□ -0.83
CTSA-216ENST00000607212 STAG3L2P0CL84 134 aa9.86□□□□□ -0.83
CTSA-216ENST00000607212 STAG3L3P0CL85 134 aa9.86□□□□□ -0.83
CTSA-216ENST00000607212 ASIPP42127 132 aa9.86□□□□□ -0.83
CTSA-216ENST00000607212 DAZ4Q86SG3 579 aaKnown RBP9.86□□□□□ -0.83
CTSA-216ENST00000607212 CYB561D1Q8N8Q1 229 aa9.86□□□□□ -0.83
CTSA-216ENST00000607212 BAALCQ8WXS3 180 aa9.86□□□□□ -0.83
CTSA-216ENST00000607212 RMI2Q96E14 147 aa9.86□□□□□ -0.83
CTSA-216ENST00000607212 PARLQ9H300 379 aa9.86□□□□□ -0.83
CTSA-216ENST00000607212 DAZ3Q9NR90 486 aaKnown RBP9.86□□□□□ -0.83
CTSA-216ENST00000607212 IGKV2D-24A0A075B6R9 120 aa9.85□□□□□ -0.83
CTSA-216ENST00000607212 A0A0D9SG52 128 aa9.85□□□□□ -0.83
CTSA-216ENST00000607212 RNASE3P12724 160 aaKnown RBP9.85□□□□□ -0.83
CTSA-216ENST00000607212 SAPCD1Q5SSQ6 148 aa9.85□□□□□ -0.83
CTSA-216ENST00000607212 KCNIP4Q6PIL6 250 aa9.85□□□□□ -0.83
CTSA-216ENST00000607212 SLC51BQ86UW2 128 aa9.85□□□□□ -0.83
CTSA-216ENST00000607212 RAB24Q969Q5 203 aa9.85□□□□□ -0.83
CTSA-216ENST00000607212 TMEM167BQ9NRX6 74 aa9.85□□□□□ -0.83
CTSA-216ENST00000607212 MED9Q9NWA0 146 aa9.85□□□□□ -0.83
CTSA-216ENST00000607212 EPDR1Q9UM22 224 aa9.85□□□□□ -0.83
CTSA-216ENST00000607212 COX11Q9Y6N1 276 aa9.85□□□□□ -0.83
CTSA-216ENST00000607212 A0A087WWC5 75 aa9.84□□□□□ -0.83
CTSA-216ENST00000607212 RNF222A6NCQ9 220 aa9.84□□□□□ -0.83
CTSA-216ENST00000607212 CXorf1O96002 111 aa9.84□□□□□ -0.83
CTSA-216ENST00000607212 MBP02144 154 aa9.84□□□□□ -0.83
CTSA-216ENST00000607212 FGF8P55075 233 aaPredicted RBP9.84□□□□□ -0.83
CTSA-216ENST00000607212 ZNF345Q14585 488 aa9.84□□□□□ -0.83
CTSA-216ENST00000607212 LINC01620Q4KN68 170 aa9.84□□□□□ -0.83
CTSA-216ENST00000607212 FAM74A4Q5TZK3 123 aa9.84□□□□□ -0.83
CTSA-216ENST00000607212 SYT8Q8NBV8 401 aa9.84□□□□□ -0.83
CTSA-216ENST00000607212 DEFB104AQ8WTQ1 72 aa9.84□□□□□ -0.83
CTSA-216ENST00000607212 PTH2Q96A98 100 aa9.84□□□□□ -0.83
CTSA-216ENST00000607212 ACTR3CQ9C0K3 210 aaPredicted RBP9.84□□□□□ -0.83
CTSA-216ENST00000607212 MYCBP2O75592 4640 aa9.83□□□□□ -0.84
CTSA-216ENST00000607212 TRAV34A0A0B4J273 112 aa9.83□□□□□ -0.84
CTSA-216ENST00000607212 H3BVH4 76 aa9.83□□□□□ -0.84
CTSA-216ENST00000607212 BCL2L11O43521 198 aa9.83□□□□□ -0.84
CTSA-216ENST00000607212 SEC11BP0C7V7 166 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms