RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 FAM74A7A6NL05 159 aa10□□□□□ -0.81
SSBP4-214ENST00000607020 PSCAO43653 123 aa10□□□□□ -0.81
SSBP4-214ENST00000607020 TCRAP04437 139 aa10□□□□□ -0.81
SSBP4-214ENST00000607020 RNASE4P34096 147 aaKnown RBP10□□□□□ -0.81
SSBP4-214ENST00000607020 SULT1A2P50226 295 aa10□□□□□ -0.81
SSBP4-214ENST00000607020 TIRAPP58753 221 aa10□□□□□ -0.81
SSBP4-214ENST00000607020 BTN1A1Q13410 526 aa10□□□□□ -0.81
SSBP4-214ENST00000607020 LINC00528Q8N1L1 170 aa10□□□□□ -0.81
SSBP4-214ENST00000607020 ZFAND2AQ8N6M9 145 aa10□□□□□ -0.81
SSBP4-214ENST00000607020 NKX6-2Q9C056 277 aaPredicted RBP10□□□□□ -0.81
SSBP4-214ENST00000607020 MRPL16Q9NX20 251 aaKnown RBP10□□□□□ -0.81
SSBP4-214ENST00000607020 EPDR1Q9UM22 224 aa10□□□□□ -0.81
SSBP4-214ENST00000607020 LENEPQ9Y5L5 61 aa10□□□□□ -0.81
SSBP4-214ENST00000607020 TRAV8-1A0A0A6YYK1 113 aa9.99□□□□□ -0.81
SSBP4-214ENST00000607020 A0A1B0GV50 99 aa9.99□□□□□ -0.81
SSBP4-214ENST00000607020 IBA57-AS1B1ANH7 110 aa9.99□□□□□ -0.81
SSBP4-214ENST00000607020 GPX1P07203 203 aa9.99□□□□□ -0.81
SSBP4-214ENST00000607020 TXNDC17Q9BRA2 123 aa9.99□□□□□ -0.81
SSBP4-214ENST00000607020 TP53TG3Q9ULZ0 132 aa9.99□□□□□ -0.81
SSBP4-214ENST00000607020 ARL2-SNX15V9GYD0 113 aa9.99□□□□□ -0.81
SSBP4-214ENST00000607020 IGHV1OR15-1A0A075B7D0 117 aa9.98□□□□□ -0.81
SSBP4-214ENST00000607020 TRGV4A0A0C4DH28 118 aa9.98□□□□□ -0.81
SSBP4-214ENST00000607020 K7EQM0 130 aa9.98□□□□□ -0.81
SSBP4-214ENST00000607020 IFNA7P01567 189 aa9.98□□□□□ -0.81
SSBP4-214ENST00000607020 LINC01556Q5JQF7 62 aa9.98□□□□□ -0.81
SSBP4-214ENST00000607020 PRR9Q5T870 116 aa9.98□□□□□ -0.81
SSBP4-214ENST00000607020 SH2D6Q7Z4S9 175 aa9.98□□□□□ -0.81
SSBP4-214ENST00000607020 CYB561D1Q8N8Q1 229 aa9.98□□□□□ -0.81
SSBP4-214ENST00000607020 PCNPQ8WW12 178 aaKnown RBP9.98□□□□□ -0.81
SSBP4-214ENST00000607020 PLA2G2DQ9UNK4 145 aa9.98□□□□□ -0.81
SSBP4-214ENST00000607020 BOLA1Q9Y3E2 137 aa9.98□□□□□ -0.81
SSBP4-214ENST00000607020 TRAV1-1A0A0B4J248 108 aa9.97□□□□□ -0.81
SSBP4-214ENST00000607020 IGHV3-38A0A0C4DH36 116 aa9.97□□□□□ -0.81
SSBP4-214ENST00000607020 RGS13O14921 159 aa9.97□□□□□ -0.81
SSBP4-214ENST00000607020 GYPEP15421 78 aa9.97□□□□□ -0.81
SSBP4-214ENST00000607020 RASL10AQ92737 203 aa9.97□□□□□ -0.81
SSBP4-214ENST00000607020 PEX7O00628 323 aa9.96□□□□□ -0.82
SSBP4-214ENST00000607020 PAGE4O60829 102 aa9.96□□□□□ -0.82
SSBP4-214ENST00000607020 IGLV2-11P01706 119 aa9.96□□□□□ -0.82
SSBP4-214ENST00000607020 PPT1P50897 306 aa9.96□□□□□ -0.82
SSBP4-214ENST00000607020 KRTAP10-4P60372 401 aaPredicted RBP9.96□□□□□ -0.82
SSBP4-214ENST00000607020 CST9LP1Q5W188 147 aa9.96□□□□□ -0.82
SSBP4-214ENST00000607020 TMEM75Q8N9X5 138 aa9.96□□□□□ -0.82
SSBP4-214ENST00000607020 HIST1H2BAQ96A08 127 aa9.96□□□□□ -0.82
SSBP4-214ENST00000607020 ZNF479Q96JC4 524 aa9.96□□□□□ -0.82
SSBP4-214ENST00000607020 SGK494Q96LW2 274 aa9.96□□□□□ -0.82
SSBP4-214ENST00000607020 TCEAL7Q9BRU2 100 aa9.96□□□□□ -0.82
SSBP4-214ENST00000607020 FBLL1A6NHQ2 334 aaKnown RBP9.95□□□□□ -0.82
SSBP4-214ENST00000607020 C9JCJ5 164 aa9.95□□□□□ -0.82
SSBP4-214ENST00000607020 TEX46H3BTG2 121 aa9.95□□□□□ -0.82
SSBP4-214ENST00000607020 CCL20P78556 96 aa9.95□□□□□ -0.82
SSBP4-214ENST00000607020 FLI1Q01543 452 aaPredicted RBP9.95□□□□□ -0.82
SSBP4-214ENST00000607020 ALKAL2Q6UX46 152 aa9.95□□□□□ -0.82
SSBP4-214ENST00000607020 TVP23CQ96ET8 276 aa9.95□□□□□ -0.82
SSBP4-214ENST00000607020 NDFIP1Q9BT67 221 aa9.95□□□□□ -0.82
SSBP4-214ENST00000607020 PSG8Q9UQ74 426 aa9.95□□□□□ -0.82
SSBP4-214ENST00000607020 SFTA3P0C7M3 94 aa9.94□□□□□ -0.82
SSBP4-214ENST00000607020 Q6AWC8 147 aa9.94□□□□□ -0.82
SSBP4-214ENST00000607020 Q6ZQT7 251 aa9.94□□□□□ -0.82
SSBP4-214ENST00000607020 LINC00479Q96M42 142 aa9.94□□□□□ -0.82
SSBP4-214ENST00000607020 SPXQ9BT56 116 aa9.94□□□□□ -0.82
SSBP4-214ENST00000607020 TREM1Q9NP99 234 aa9.94□□□□□ -0.82
SSBP4-214ENST00000607020 MANBALQ9NQG1 85 aa9.94□□□□□ -0.82
SSBP4-214ENST00000607020 FAT3Q8TDW7 4589 aa9.93□□□□□ -0.82
SSBP4-214ENST00000607020 F6UZH7 168 aa9.93□□□□□ -0.82
SSBP4-214ENST00000607020 TDRG1Q3Y452 100 aa9.93□□□□□ -0.82
SSBP4-214ENST00000607020 PRNTQ86SH4 94 aa9.93□□□□□ -0.82
SSBP4-214ENST00000607020 GNG13Q9P2W3 67 aa9.93□□□□□ -0.82
SSBP4-214ENST00000607020 TRAV34A0A0B4J273 112 aa9.92□□□□□ -0.82
SSBP4-214ENST00000607020 TRAV4A0A0B4J268 109 aa9.91□□□□□ -0.82
SSBP4-214ENST00000607020 SAPCD1Q5SSQ6 148 aa9.91□□□□□ -0.82
SSBP4-214ENST00000607020 Q86TA4 180 aa9.91□□□□□ -0.82
SSBP4-214ENST00000607020 FMC1Q96HJ9 113 aa9.91□□□□□ -0.82
SSBP4-214ENST00000607020 TM2D2Q9BX73 214 aa9.91□□□□□ -0.82
SSBP4-214ENST00000607020 TRAV8-6A0A0B4J262 113 aa9.9□□□□□ -0.82
SSBP4-214ENST00000607020 TRAV21A0A0B4J279 112 aa9.9□□□□□ -0.82
SSBP4-214ENST00000607020 SCO2A0A1W2PP80 73 aa9.9□□□□□ -0.82
SSBP4-214ENST00000607020 IFNA1P01562 189 aa9.9□□□□□ -0.82
SSBP4-214ENST00000607020 AKR1C3P42330 323 aa9.9□□□□□ -0.82
SSBP4-214ENST00000607020 UBE2G1P62253 170 aa9.9□□□□□ -0.82
SSBP4-214ENST00000607020 BLOC1S1P78537 153 aa9.9□□□□□ -0.82
SSBP4-214ENST00000607020 LAGE3Q14657 143 aa9.9□□□□□ -0.82
SSBP4-214ENST00000607020 MUC21Q5SSG8 566 aa9.9□□□□□ -0.82
SSBP4-214ENST00000607020 Q9HAA7 133 aa9.9□□□□□ -0.82
SSBP4-214ENST00000607020 TRBV6-1A0A0K0K1D8 114 aa9.89□□□□□ -0.83
SSBP4-214ENST00000607020 GCGP01275 180 aa9.89□□□□□ -0.83
SSBP4-214ENST00000607020 PFN1P07737 140 aaKnown RBP9.89□□□□□ -0.83
SSBP4-214ENST00000607020 ZNF80P51504 273 aaPredicted RBP9.89□□□□□ -0.83
SSBP4-214ENST00000607020 WFDC2Q14508 124 aa9.89□□□□□ -0.83
SSBP4-214ENST00000607020 SMUG1Q53HV7 270 aa9.89□□□□□ -0.83
SSBP4-214ENST00000607020 FAM159AQ6UWV7 190 aa9.89□□□□□ -0.83
SSBP4-214ENST00000607020 SCXQ7RTU7 201 aa9.89□□□□□ -0.83
SSBP4-214ENST00000607020 LOC100131303A0A0U1RQF7 123 aa9.88□□□□□ -0.83
SSBP4-214ENST00000607020 BCL2P10415 239 aa9.88□□□□□ -0.83
SSBP4-214ENST00000607020 TMEM183BQ1AE95 376 aa9.88□□□□□ -0.83
SSBP4-214ENST00000607020 OR4C5Q8NGB2 326 aa9.88□□□□□ -0.83
SSBP4-214ENST00000607020 NAGKQ9UJ70 344 aa9.88□□□□□ -0.83
SSBP4-214ENST00000607020 ZFP30Q9Y2G7 519 aa9.88□□□□□ -0.83
SSBP4-214ENST00000607020 TRGV11A0A075B6L2 103 aa9.87□□□□□ -0.83
SSBP4-214ENST00000607020 LTAP01374 205 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms