RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 MKXQ8IYA7 352 aa3.61□□□□□ -1.83
LINC01109-201ENST00000603837 C1orf158Q8N1D5 194 aa3.61□□□□□ -1.83
LINC01109-201ENST00000603837 PRSS33Q8NF86 280 aa3.61□□□□□ -1.83
LINC01109-201ENST00000603837 IGHV1OR15-9A0A0B4J2B8 117 aa3.61□□□□□ -1.83
LINC01109-201ENST00000603837 A0A1B0GUT8 65 aa3.61□□□□□ -1.83
LINC01109-201ENST00000603837 DEFB133Q30KQ1 61 aa3.61□□□□□ -1.83
LINC01109-201ENST00000603837 TMEM30BQ3MIR4 351 aa3.61□□□□□ -1.83
LINC01109-201ENST00000603837 TMEM170BQ5T4T1 132 aa3.61□□□□□ -1.83
LINC01109-201ENST00000603837 PRNTQ86SH4 94 aa3.61□□□□□ -1.83
LINC01109-201ENST00000603837 WDR86Q86TI4 376 aa3.61□□□□□ -1.83
LINC01109-201ENST00000603837 NDUFA11Q86Y39 141 aa3.61□□□□□ -1.83
LINC01109-201ENST00000603837 ANKRD11Q6UB99 2663 aaPredicted RBP3.6□□□□□ -1.83
LINC01109-201ENST00000603837 DSPP15924 2871 aaKnown RBP3.6□□□□□ -1.83
LINC01109-201ENST00000603837 P0C879 139 aa3.6□□□□□ -1.83
LINC01109-201ENST00000603837 SLC25A16P16260 332 aa3.6□□□□□ -1.83
LINC01109-201ENST00000603837 DEFB110Q30KQ9 67 aa3.6□□□□□ -1.83
LINC01109-201ENST00000603837 ZNF492Q9P255 531 aa3.6□□□□□ -1.83
LINC01109-201ENST00000603837 TRAV40A0A0B4J280 105 aa3.6□□□□□ -1.83
LINC01109-201ENST00000603837 PATE3B3GLJ2 98 aa3.6□□□□□ -1.83
LINC01109-201ENST00000603837 D6R8Y8 96 aa3.6□□□□□ -1.83
LINC01109-201ENST00000603837 M0R135 149 aa3.6□□□□□ -1.83
LINC01109-201ENST00000603837 IGLV2-14P01704 120 aa3.6□□□□□ -1.83
LINC01109-201ENST00000603837 DPH3P1Q9H4G8 78 aa3.6□□□□□ -1.83
LINC01109-201ENST00000603837 AKAP13Q12802 2813 aa3.6□□□□□ -1.83
LINC01109-201ENST00000603837 TRBV10-2A0A0K0K1G8 114 aa3.59□□□□□ -1.83
LINC01109-201ENST00000603837 SS18L1O75177 396 aaPredicted RBP3.59□□□□□ -1.83
LINC01109-201ENST00000603837 ARMS2P0C7Q2 107 aa3.59□□□□□ -1.83
LINC01109-201ENST00000603837 SPTAN1Q13813 2472 aaKnown RBP3.59□□□□□ -1.83
LINC01109-201ENST00000603837 ATXN8Q156A1 80 aa3.59□□□□□ -1.83
LINC01109-201ENST00000603837 LINC00322Q6ZN03 302 aaPredicted RBP3.59□□□□□ -1.83
LINC01109-201ENST00000603837 ZNF329Q86UD4 541 aa3.59□□□□□ -1.83
LINC01109-201ENST00000603837 RTTNQ86VV8 2226 aa3.59□□□□□ -1.83
LINC01109-201ENST00000603837 PYYP10082 97 aa3.59□□□□□ -1.83
LINC01109-201ENST00000603837 ZNF22P17026 224 aaPredicted RBP3.59□□□□□ -1.83
LINC01109-201ENST00000603837 C2orf82Q6UX34 121 aa3.59□□□□□ -1.83
LINC01109-201ENST00000603837 SCGB1D4Q6XE38 83 aa3.59□□□□□ -1.83
LINC01109-201ENST00000603837 FOXL2NBQ6ZUU3 175 aa3.59□□□□□ -1.83
LINC01109-201ENST00000603837 ORMDL3Q8N138 153 aa3.59□□□□□ -1.83
LINC01109-201ENST00000603837 LINC01600Q96MT4 127 aa3.59□□□□□ -1.83
LINC01109-201ENST00000603837 PAXXQ9BUH6 204 aa3.59□□□□□ -1.83
LINC01109-201ENST00000603837 ZNF318Q5VUA4 2279 aa3.59□□□□□ -1.83
LINC01109-201ENST00000603837 CEP192Q8TEP8 1941 aa3.59□□□□□ -1.83
LINC01109-201ENST00000603837 SMIM26A0A096LP01 95 aa3.59□□□□□ -1.84
LINC01109-201ENST00000603837 SPTY2D1-AS1A0A0U1RR47 76 aa3.59□□□□□ -1.84
LINC01109-201ENST00000603837 NPC2P61916 151 aa3.59□□□□□ -1.84
LINC01109-201ENST00000603837 SNRPD3P62318 126 aaKnown RBP3.59□□□□□ -1.84
LINC01109-201ENST00000603837 DAZAP2Q15038 168 aaPredicted RBP3.59□□□□□ -1.84
LINC01109-201ENST00000603837 RBMY1FQ15415 496 aaKnown RBP3.59□□□□□ -1.84
LINC01109-201ENST00000603837 Q6ZRU5 148 aa3.59□□□□□ -1.84
LINC01109-201ENST00000603837 Q75L30 129 aa3.59□□□□□ -1.84
LINC01109-201ENST00000603837 LINC00643Q86TS7 51 aa3.59□□□□□ -1.84
LINC01109-201ENST00000603837 ITLN1Q8WWA0 313 aa3.59□□□□□ -1.84
LINC01109-201ENST00000603837 MRPL35Q9NZE8 188 aaKnown RBP3.59□□□□□ -1.84
LINC01109-201ENST00000603837 ZZEF1O43149 2961 aa3.58□□□□□ -1.84
LINC01109-201ENST00000603837 IGHV4-39P01824 125 aa3.58□□□□□ -1.84
LINC01109-201ENST00000603837 RNF182Q8N6D2 247 aa3.58□□□□□ -1.84
LINC01109-201ENST00000603837 NEXN-AS1Q8NBZ9 246 aa3.58□□□□□ -1.84
LINC01109-201ENST00000603837 PRO1854Q9UHT4 67 aa3.58□□□□□ -1.84
LINC01109-201ENST00000603837 ATRXP46100 2492 aa3.58□□□□□ -1.84
LINC01109-201ENST00000603837 ATMQ13315 3056 aa3.58□□□□□ -1.84
LINC01109-201ENST00000603837 DNAJC13O75165 2243 aa3.58□□□□□ -1.84
LINC01109-201ENST00000603837 TRAV12-2A0A075B6T6 113 aa3.58□□□□□ -1.84
LINC01109-201ENST00000603837 NDUFA3O95167 84 aa3.58□□□□□ -1.84
LINC01109-201ENST00000603837 ACYP1P07311 99 aa3.58□□□□□ -1.84
LINC01109-201ENST00000603837 PRB4P10163 310 aaPredicted RBP3.58□□□□□ -1.84
LINC01109-201ENST00000603837 PSMB8P28062 276 aa3.58□□□□□ -1.84
LINC01109-201ENST00000603837 CXCL5P42830 114 aa3.58□□□□□ -1.84
LINC01109-201ENST00000603837 PVRIGQ6DKI7 326 aa3.58□□□□□ -1.84
LINC01109-201ENST00000603837 SLC25A45Q8N413 288 aa3.58□□□□□ -1.84
LINC01109-201ENST00000603837 ZNF815PA8K554 130 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 P0DMU3 169 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 FAM231AP0DMU4 169 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 FAM231CP0DMU5 169 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 PLNP26678 52 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 CCL8P80075 99 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 IGLV3-21P80748 117 aaPredicted RBP3.57□□□□□ -1.84
LINC01109-201ENST00000603837 LINC00305Q7Z4B0 112 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 SERP2Q8N6R1 65 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 PROK2Q9HC23 129 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 U3KQK5 164 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 C17orf98A8MV24 154 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 TRIAP1O43715 76 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 CFC1BP0CG36 223 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 CFC1P0CG37 223 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 BEAN1Q3B7T3 259 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 Q8N8P6 123 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 TMEM105Q8N8V8 129 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 UBALD1Q8TB05 177 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 CCL17Q92583 94 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 SPTSSAQ969W0 71 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 TIMM17AQ99595 171 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 UPK3BQ9BT76 320 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 C16orf95Q9H693 158 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 NACAE9PAV3 2078 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 TRBV6-6A0A0A6YYG2 114 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 H3BT86 120 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 H7C2G1 150 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 SYNJ2BPP57105 145 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 FGF12P61328 243 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 PCBD1P61457 104 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms