RNA–Protein interactions for RNA: ENST00000603651.1

TUBE1-205, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-205ENST00000603651 TRBV7-6A0A0J9YX20 115 aa-0.66□□□□□ -2.52
TUBE1-205ENST00000603651 H3BMG7 143 aa-0.66□□□□□ -2.52
TUBE1-205ENST00000603651 ADCYAP1P18509 176 aa-0.66□□□□□ -2.52
TUBE1-205ENST00000603651 CRYBA4P53673 196 aa-0.66□□□□□ -2.52
TUBE1-205ENST00000603651 BASP1P80723 227 aaKnown RBP-0.66□□□□□ -2.52
TUBE1-205ENST00000603651 MRPS25P82663 173 aaKnown RBP-0.66□□□□□ -2.52
TUBE1-205ENST00000603651 UNQ5815/PRO19632Q6UWF5 114 aa-0.66□□□□□ -2.52
TUBE1-205ENST00000603651 HRCT1Q6UXD1 115 aa-0.66□□□□□ -2.52
TUBE1-205ENST00000603651 OR4S1Q8NGB4 309 aa-0.66□□□□□ -2.52
TUBE1-205ENST00000603651 SMIM11BQ8TCY0 68 aa-0.66□□□□□ -2.52
TUBE1-205ENST00000603651 DYDC1Q8WWB3 177 aa-0.66□□□□□ -2.52
TUBE1-205ENST00000603651 CBLN4Q9NTU7 201 aa-0.66□□□□□ -2.52
TUBE1-205ENST00000603651 ACANP16112 2415 aa-0.66□□□□□ -2.52
TUBE1-205ENST00000603651 COL6A3P12111 3177 aa-0.66□□□□□ -2.52
TUBE1-205ENST00000603651 STAB2Q8WWQ8 2551 aa-0.66□□□□□ -2.52
TUBE1-205ENST00000603651 NHSL1Q5SYE7 1610 aa-0.67□□□□□ -2.52
TUBE1-205ENST00000603651 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.67□□□□□ -2.52
TUBE1-205ENST00000603651 EIF3AQ14152 1382 aaKnown RBP-0.67□□□□□ -2.52
TUBE1-205ENST00000603651 AKAP11Q9UKA4 1901 aa-0.67□□□□□ -2.52
TUBE1-205ENST00000603651 ZNF142P52746 1687 aaPredicted RBP-0.67□□□□□ -2.52
TUBE1-205ENST00000603651 IGHV1-24A0A0C4DH33 117 aa-0.67□□□□□ -2.52
TUBE1-205ENST00000603651 HBDP02042 147 aa-0.67□□□□□ -2.52
TUBE1-205ENST00000603651 SDC4P31431 198 aa-0.67□□□□□ -2.52
TUBE1-205ENST00000603651 CKS2P33552 79 aa-0.67□□□□□ -2.52
TUBE1-205ENST00000603651 POLR2JP52435 117 aaKnown RBP-0.67□□□□□ -2.52
TUBE1-205ENST00000603651 STX19Q8N4C7 294 aa-0.67□□□□□ -2.52
TUBE1-205ENST00000603651 Q96NJ1 140 aa-0.67□□□□□ -2.52
TUBE1-205ENST00000603651 CYP4F30PQ9H0H9 118 aa-0.67□□□□□ -2.52
TUBE1-205ENST00000603651 HYDINQ4G0P3 5121 aa-0.67□□□□□ -2.52
TUBE1-205ENST00000603651 FLGP20930 4061 aaPredicted RBP-0.67□□□□□ -2.52
TUBE1-205ENST00000603651 CASZ1Q86V15 1759 aa-0.68□□□□□ -2.52
TUBE1-205ENST00000603651 SPTBN2O15020 2390 aa-0.68□□□□□ -2.52
TUBE1-205ENST00000603651 STARD9Q9P2P6 4700 aa-0.68□□□□□ -2.52
TUBE1-205ENST00000603651 UBR4Q5T4S7 5183 aa-0.68□□□□□ -2.52
TUBE1-205ENST00000603651 TRAV17A0A0B4J275 112 aa-0.68□□□□□ -2.52
TUBE1-205ENST00000603651 LOC107984640A0A0U1RRK4 108 aa-0.68□□□□□ -2.52
TUBE1-205ENST00000603651 ZNF670-ZNF695F2Z2N8 137 aa-0.68□□□□□ -2.52
TUBE1-205ENST00000603651 M0QZK8 103 aa-0.68□□□□□ -2.52
TUBE1-205ENST00000603651 FLNBO75369 2602 aaKnown RBP-0.68□□□□□ -2.52
TUBE1-205ENST00000603651 S100A6P06703 90 aa-0.68□□□□□ -2.52
TUBE1-205ENST00000603651 SRP9P49458 86 aaKnown RBP-0.68□□□□□ -2.52
TUBE1-205ENST00000603651 TCTAP57738 103 aa-0.68□□□□□ -2.52
TUBE1-205ENST00000603651 DCUN1D2Q6PH85 259 aa-0.68□□□□□ -2.52
TUBE1-205ENST00000603651 PPP1R1CQ8WVI7 109 aa-0.68□□□□□ -2.52
TUBE1-205ENST00000603651 HOPXQ9BPY8 73 aaPredicted RBP-0.68□□□□□ -2.52
TUBE1-205ENST00000603651 LXNQ9BS40 222 aa-0.68□□□□□ -2.52
TUBE1-205ENST00000603651 PIEZO2Q9H5I5 2752 aa-0.68□□□□□ -2.52
TUBE1-205ENST00000603651 YTHDC2Q9H6S0 1430 aaKnown RBP-0.68□□□□□ -2.52
TUBE1-205ENST00000603651 LAMTOR2Q9Y2Q5 125 aa-0.68□□□□□ -2.52
TUBE1-205ENST00000603651 EP300Q09472 2414 aaPredicted RBP-0.68□□□□□ -2.52
TUBE1-205ENST00000603651 SYNMO15061 1565 aa-0.69□□□□□ -2.52
TUBE1-205ENST00000603651 MAP1LC3B2A6NCE7 125 aa-0.69□□□□□ -2.52
TUBE1-205ENST00000603651 PPP5D1E7EU14 171 aa-0.69□□□□□ -2.52
TUBE1-205ENST00000603651 APODP05090 189 aa-0.69□□□□□ -2.52
TUBE1-205ENST00000603651 SLC25A5P05141 298 aaKnown RBP-0.69□□□□□ -2.52
TUBE1-205ENST00000603651 DEFB109BQ30KR1 87 aa-0.69□□□□□ -2.52
TUBE1-205ENST00000603651 TMEM78Q5T7P6 136 aa-0.69□□□□□ -2.52
TUBE1-205ENST00000603651 OR2T2Q6IF00 324 aa-0.69□□□□□ -2.52
TUBE1-205ENST00000603651 TMED4Q7Z7H5 227 aa-0.69□□□□□ -2.52
TUBE1-205ENST00000603651 MED31Q9Y3C7 131 aa-0.69□□□□□ -2.52
TUBE1-205ENST00000603651 KIF13AQ9H1H9 1805 aa-0.69□□□□□ -2.52
TUBE1-205ENST00000603651 WNK1Q9H4A3 2382 aa-0.69□□□□□ -2.52
TUBE1-205ENST00000603651 USH2AO75445 5202 aa-0.69□□□□□ -2.52
TUBE1-205ENST00000603651 DOCK11Q5JSL3 2073 aa-0.69□□□□□ -2.52
TUBE1-205ENST00000603651 A0A1W2PRE2 83 aa-0.7□□□□□ -2.52
TUBE1-205ENST00000603651 RBAKDNA6NC62 111 aa-0.7□□□□□ -2.52
TUBE1-205ENST00000603651 ZNF815PA8K554 130 aa-0.7□□□□□ -2.52
TUBE1-205ENST00000603651 IFNA21P01568 189 aa-0.7□□□□□ -2.52
TUBE1-205ENST00000603651 APOC1P02654 83 aa-0.7□□□□□ -2.52
TUBE1-205ENST00000603651 COX4I1P13073 169 aa-0.7□□□□□ -2.52
TUBE1-205ENST00000603651 WFDC2Q14508 124 aa-0.7□□□□□ -2.52
TUBE1-205ENST00000603651 Q6ZRX8 168 aa-0.7□□□□□ -2.52
TUBE1-205ENST00000603651 SSBP3-AS1Q7Z2R9 100 aa-0.7□□□□□ -2.52
TUBE1-205ENST00000603651 BRK1Q8WUW1 75 aa-0.7□□□□□ -2.52
TUBE1-205ENST00000603651 PPDPFLQ8WWR9 84 aa-0.7□□□□□ -2.52
TUBE1-205ENST00000603651 CHMP6Q96FZ7 201 aa-0.7□□□□□ -2.52
TUBE1-205ENST00000603651 BOLA2Q9H3K6 86 aa-0.7□□□□□ -2.52
TUBE1-205ENST00000603651 TMEM242Q9NWH2 141 aa-0.7□□□□□ -2.52
TUBE1-205ENST00000603651 NDUFAF1Q9Y375 327 aa-0.7□□□□□ -2.52
TUBE1-205ENST00000603651 PTPRMP28827 1452 aa-0.7□□□□□ -2.52
TUBE1-205ENST00000603651 PPRC1Q5VV67 1664 aaKnown RBP-0.7□□□□□ -2.52
TUBE1-205ENST00000603651 PKDREJQ9NTG1 2253 aa-0.7□□□□□ -2.52
TUBE1-205ENST00000603651 HIVEP1P15822 2718 aa-0.7□□□□□ -2.52
TUBE1-205ENST00000603651 ARHGAP31Q2M1Z3 1444 aa-0.71□□□□□ -2.52
TUBE1-205ENST00000603651 PKHD1P08F94 4074 aa-0.71□□□□□ -2.52
TUBE1-205ENST00000603651 KIAA1109Q2LD37 5005 aa-0.71□□□□□ -2.52
TUBE1-205ENST00000603651 A2MP01023 1474 aa-0.71□□□□□ -2.52
TUBE1-205ENST00000603651 UQCRQO14949 82 aa-0.71□□□□□ -2.52
TUBE1-205ENST00000603651 CCL3L1P16619 93 aa-0.71□□□□□ -2.52
TUBE1-205ENST00000603651 RPL7P18124 248 aaKnown RBP-0.71□□□□□ -2.52
TUBE1-205ENST00000603651 SERPINB1P30740 379 aa-0.71□□□□□ -2.52
TUBE1-205ENST00000603651 RPL22P35268 128 aaKnown RBP-0.71□□□□□ -2.52
TUBE1-205ENST00000603651 AKR1D1P51857 326 aa-0.71□□□□□ -2.52
TUBE1-205ENST00000603651 POLR2HP52434 150 aaKnown RBP-0.71□□□□□ -2.52
TUBE1-205ENST00000603651 PCBD1P61457 104 aa-0.71□□□□□ -2.52
TUBE1-205ENST00000603651 STX12Q86Y82 276 aa-0.71□□□□□ -2.52
TUBE1-205ENST00000603651 STOML2Q9UJZ1 356 aa-0.71□□□□□ -2.52
TUBE1-205ENST00000603651 TRAPPC2LQ9UL33 140 aa-0.71□□□□□ -2.52
TUBE1-205ENST00000603651 PHIPQ8WWQ0 1821 aa-0.71□□□□□ -2.52
TUBE1-205ENST00000603651 RYR1P21817 5038 aa-0.72□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms