RNA–Protein interactions for RNA: ENST00000602800.1

PPFIA3-210, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-210ENST00000602800 UPK3BQ9BT76 320 aa13.3□□□□□ -0.28
PPFIA3-210ENST00000602800 TRAV21A0A0B4J279 112 aa13.29□□□□□ -0.28
PPFIA3-210ENST00000602800 ZNF727A8MUV8 499 aa13.29□□□□□ -0.28
PPFIA3-210ENST00000602800 C9JQL5 133 aa13.29□□□□□ -0.28
PPFIA3-210ENST00000602800 Q6AWC8 147 aa13.29□□□□□ -0.28
PPFIA3-210ENST00000602800 BIN3Q9NQY0 253 aa13.29□□□□□ -0.28
PPFIA3-210ENST00000602800 NDUFA5Q16718 116 aa13.28□□□□□ -0.28
PPFIA3-210ENST00000602800 ESRGQ1W209 222 aa13.28□□□□□ -0.28
PPFIA3-210ENST00000602800 PRR9Q5T870 116 aa13.28□□□□□ -0.28
PPFIA3-210ENST00000602800 EIF4E3Q8N5X7 224 aaKnown RBP13.28□□□□□ -0.28
PPFIA3-210ENST00000602800 MLST8Q9BVC4 326 aa13.28□□□□□ -0.28
PPFIA3-210ENST00000602800 FABP5P3A8MUU1 101 aa13.27□□□□□ -0.29
PPFIA3-210ENST00000602800 EPM2AB3EWF7 344 aa13.27□□□□□ -0.29
PPFIA3-210ENST00000602800 ZNF324O75467 553 aaPredicted RBP13.27□□□□□ -0.29
PPFIA3-210ENST00000602800 PFN1P07737 140 aaKnown RBP13.27□□□□□ -0.29
PPFIA3-210ENST00000602800 MGST1P10620 155 aaKnown RBP13.27□□□□□ -0.29
PPFIA3-210ENST00000602800 LINC00612Q8N6U2 182 aa13.27□□□□□ -0.29
PPFIA3-210ENST00000602800 NHLRC2Q8NBF2 726 aa13.27□□□□□ -0.29
PPFIA3-210ENST00000602800 ZC2HC1AQ96GY0 325 aa13.27□□□□□ -0.29
PPFIA3-210ENST00000602800 PYGO2Q9BRQ0 406 aa13.27□□□□□ -0.29
PPFIA3-210ENST00000602800 MRPS16Q9Y3D3 137 aaKnown RBP13.27□□□□□ -0.29
PPFIA3-210ENST00000602800 GAGE12BA1L429 117 aa13.26□□□□□ -0.29
PPFIA3-210ENST00000602800 H3BNG1 76 aa13.26□□□□□ -0.29
PPFIA3-210ENST00000602800 GAGE7O76087 117 aa13.26□□□□□ -0.29
PPFIA3-210ENST00000602800 SFTA3P0C7M3 94 aa13.26□□□□□ -0.29
PPFIA3-210ENST00000602800 GAGE12FP0CL80 117 aa13.26□□□□□ -0.29
PPFIA3-210ENST00000602800 GAGE12GP0CL81 117 aa13.26□□□□□ -0.29
PPFIA3-210ENST00000602800 GAGE12IP0CL82 117 aa13.26□□□□□ -0.29
PPFIA3-210ENST00000602800 FAM162BQ5T6X4 162 aa13.26□□□□□ -0.29
PPFIA3-210ENST00000602800 LY96Q9Y6Y9 160 aa13.26□□□□□ -0.29
PPFIA3-210ENST00000602800 DMBT1Q9UGM3 2413 aaPredicted RBP13.25□□□□□ -0.29
PPFIA3-210ENST00000602800 SNURFLB1AK76 121 aa13.25□□□□□ -0.29
PPFIA3-210ENST00000602800 HOXA5P20719 270 aa13.25□□□□□ -0.29
PPFIA3-210ENST00000602800 ZNF80P51504 273 aaPredicted RBP13.25□□□□□ -0.29
PPFIA3-210ENST00000602800 TMEM241Q24JQ0 296 aa13.25□□□□□ -0.29
PPFIA3-210ENST00000602800 FAM159AQ6UWV7 190 aa13.25□□□□□ -0.29
PPFIA3-210ENST00000602800 TRBV20OR9-2A0A075B6H5 130 aa13.24□□□□□ -0.29
PPFIA3-210ENST00000602800 IGHV1OR15-1A0A075B7D0 117 aa13.24□□□□□ -0.29
PPFIA3-210ENST00000602800 IGLV2-8P01709 118 aa13.24□□□□□ -0.29
PPFIA3-210ENST00000602800 PRR27Q6MZM9 219 aa13.24□□□□□ -0.29
PPFIA3-210ENST00000602800 OCC1Q8TAD7 63 aa13.24□□□□□ -0.29
PPFIA3-210ENST00000602800 DAZAP1Q96EP5 407 aaKnown RBP13.24□□□□□ -0.29
PPFIA3-210ENST00000602800 LINC00467Q9BRT7 94 aa13.24□□□□□ -0.29
PPFIA3-210ENST00000602800 SH2D1AO60880 128 aa13.23□□□□□ -0.29
PPFIA3-210ENST00000602800 KCNS1Q96KK3 526 aa13.23□□□□□ -0.29
PPFIA3-210ENST00000602800 NAT8Q9UHE5 227 aa13.23□□□□□ -0.29
PPFIA3-210ENST00000602800 NAGKQ9UJ70 344 aa13.23□□□□□ -0.29
PPFIA3-210ENST00000602800 PGPEP1LA6NFU8 196 aa13.22□□□□□ -0.29
PPFIA3-210ENST00000602800 CRIP1P50238 77 aa13.22□□□□□ -0.29
PPFIA3-210ENST00000602800 LINC00315P59091 139 aa13.22□□□□□ -0.29
PPFIA3-210ENST00000602800 PGPEP1Q9NXJ5 209 aa13.22□□□□□ -0.29
PPFIA3-210ENST00000602800 TMEM218A2RU14 115 aa13.21□□□□□ -0.29
PPFIA3-210ENST00000602800 EREGO14944 169 aa13.21□□□□□ -0.29
PPFIA3-210ENST00000602800 ORM1P02763 201 aa13.21□□□□□ -0.29
PPFIA3-210ENST00000602800 MUC21Q5SSG8 566 aa13.21□□□□□ -0.29
PPFIA3-210ENST00000602800 SDF2L1Q9HCN8 221 aa13.21□□□□□ -0.29
PPFIA3-210ENST00000602800 TRGV11A0A075B6L2 103 aa13.2□□□□□ -0.3
PPFIA3-210ENST00000602800 INAFM2P0DMQ5 153 aa13.2□□□□□ -0.3
PPFIA3-210ENST00000602800 TDRG1Q3Y452 100 aa13.2□□□□□ -0.3
PPFIA3-210ENST00000602800 ANXA2RQ3ZCQ2 193 aa13.2□□□□□ -0.3
PPFIA3-210ENST00000602800 Q6ZQT7 251 aa13.2□□□□□ -0.3
PPFIA3-210ENST00000602800 F8W036 122 aa13.19□□□□□ -0.3
PPFIA3-210ENST00000602800 DAZ2Q13117 558 aaKnown RBP13.19□□□□□ -0.3
PPFIA3-210ENST00000602800 LINC01551Q86U37 167 aa13.19□□□□□ -0.3
PPFIA3-210ENST00000602800 TRGV2A0A075B6R0 118 aa13.18□□□□□ -0.3
PPFIA3-210ENST00000602800 A0A096LPF7 62 aa13.18□□□□□ -0.3
PPFIA3-210ENST00000602800 K7EN84 100 aa13.18□□□□□ -0.3
PPFIA3-210ENST00000602800 P01737 135 aa13.18□□□□□ -0.3
PPFIA3-210ENST00000602800 ADIRFQ15847 76 aa13.18□□□□□ -0.3
PPFIA3-210ENST00000602800 Q6ZRN7 208 aaPredicted RBP13.18□□□□□ -0.3
PPFIA3-210ENST00000602800 Q6ZTI0 123 aa13.18□□□□□ -0.3
PPFIA3-210ENST00000602800 C19orf71A6NCJ1 209 aa13.17□□□□□ -0.3
PPFIA3-210ENST00000602800 B4DEV8 164 aa13.17□□□□□ -0.3
PPFIA3-210ENST00000602800 M0R036 132 aa13.17□□□□□ -0.3
PPFIA3-210ENST00000602800 SIVA1O15304 175 aa13.17□□□□□ -0.3
PPFIA3-210ENST00000602800 ERVFC1-1P60608 527 aa13.17□□□□□ -0.3
PPFIA3-210ENST00000602800 RPL23P62829 140 aaKnown RBP13.17□□□□□ -0.3
PPFIA3-210ENST00000602800 PNRC1Q12796 327 aaPredicted RBP13.17□□□□□ -0.3
PPFIA3-210ENST00000602800 LINC01559Q495D7 138 aa13.17□□□□□ -0.3
PPFIA3-210ENST00000602800 VSIG2Q96IQ7 327 aa13.17□□□□□ -0.3
PPFIA3-210ENST00000602800 SEC11CQ9BY50 192 aa13.17□□□□□ -0.3
PPFIA3-210ENST00000602800 C11orf21Q9P2W6 132 aa13.17□□□□□ -0.3
PPFIA3-210ENST00000602800 KRBOX1C9JBD0 128 aa13.16□□□□□ -0.3
PPFIA3-210ENST00000602800 RPS20P60866 119 aaKnown RBP13.16□□□□□ -0.3
PPFIA3-210ENST00000602800 ZNF415Q09FC8 603 aa13.16□□□□□ -0.3
PPFIA3-210ENST00000602800 IBA57Q5T440 356 aaKnown RBP13.16□□□□□ -0.3
PPFIA3-210ENST00000602800 CDPF1Q6NVV7 123 aa13.16□□□□□ -0.3
PPFIA3-210ENST00000602800 FAM231DQ6ZW35 169 aa13.16□□□□□ -0.3
PPFIA3-210ENST00000602800 NUDT10Q8NFP7 164 aa13.16□□□□□ -0.3
PPFIA3-210ENST00000602800 NUDT11Q96G61 164 aa13.16□□□□□ -0.3
PPFIA3-210ENST00000602800 IGKV3D-20A0A0C4DH25 116 aa13.15□□□□□ -0.3
PPFIA3-210ENST00000602800 XKRY2A2RUG3 117 aa13.15□□□□□ -0.3
PPFIA3-210ENST00000602800 GNRH2O43555 120 aa13.15□□□□□ -0.3
PPFIA3-210ENST00000602800 TYMSP04818 313 aa13.15□□□□□ -0.3
PPFIA3-210ENST00000602800 ASIPP42127 132 aa13.15□□□□□ -0.3
PPFIA3-210ENST00000602800 C15orf54Q8N8G6 183 aa13.15□□□□□ -0.3
PPFIA3-210ENST00000602800 OR2D3Q8NGH3 330 aa13.15□□□□□ -0.3
PPFIA3-210ENST00000602800 FRZBQ92765 325 aa13.15□□□□□ -0.3
PPFIA3-210ENST00000602800 TP53TG3Q9ULZ0 132 aa13.15□□□□□ -0.3
PPFIA3-210ENST00000602800 FAT1Q14517 4588 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms