RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 IGKV1-6A0A0C4DH72 117 aa6.94□□□□□ -1.3
CSMD1-216ENST00000602557 RUSC1-AS1Q66K80 236 aa6.94□□□□□ -1.3
CSMD1-216ENST00000602557 MDS2Q8NDY4 140 aa6.94□□□□□ -1.3
CSMD1-216ENST00000602557 HS3ST6Q96QI5 342 aa6.94□□□□□ -1.3
CSMD1-216ENST00000602557 SPANXB1Q9NS25 103 aaPredicted RBP6.94□□□□□ -1.3
CSMD1-216ENST00000602557 LINC01545Q5VT33 79 aa6.93□□□□□ -1.3
CSMD1-216ENST00000602557 M0QXV9 152 aa6.93□□□□□ -1.3
CSMD1-216ENST00000602557 IGHV3-38A0A0C4DH36 116 aa6.93□□□□□ -1.3
CSMD1-216ENST00000602557 GNLYP22749 145 aa6.93□□□□□ -1.3
CSMD1-216ENST00000602557 WFDC11Q8NEX6 87 aa6.93□□□□□ -1.3
CSMD1-216ENST00000602557 USP9YO00507 2555 aaPredicted RBP6.93□□□□□ -1.3
CSMD1-216ENST00000602557 FAM120AOSQ5T036 256 aa6.93□□□□□ -1.3
CSMD1-216ENST00000602557 TRBV19A0A075B6N1 114 aa6.93□□□□□ -1.3
CSMD1-216ENST00000602557 TRAV13-2A0A0B4J235 113 aa6.93□□□□□ -1.3
CSMD1-216ENST00000602557 B3GALT5-AS1P59052 145 aa6.93□□□□□ -1.3
CSMD1-216ENST00000602557 HERVK_113P63121 156 aa6.93□□□□□ -1.3
CSMD1-216ENST00000602557 SPINK13Q1W4C9 94 aa6.93□□□□□ -1.3
CSMD1-216ENST00000602557 SPATA12Q7Z6I5 190 aa6.93□□□□□ -1.3
CSMD1-216ENST00000602557 SMIM2Q9BVW6 85 aa6.92□□□□□ -1.3
CSMD1-216ENST00000602557 Q6ZS49 121 aa6.92□□□□□ -1.3
CSMD1-216ENST00000602557 F6UB75 175 aa6.92□□□□□ -1.3
CSMD1-216ENST00000602557 BPESC1Q9GZL8 116 aa6.92□□□□□ -1.3
CSMD1-216ENST00000602557 XCL2Q9UBD3 114 aa6.92□□□□□ -1.3
CSMD1-216ENST00000602557 GATA1P15976 413 aaPredicted RBP6.92□□□□□ -1.3
CSMD1-216ENST00000602557 IGHV4-4A0A075B6R2 117 aa6.92□□□□□ -1.3
CSMD1-216ENST00000602557 F5H768 121 aa6.92□□□□□ -1.3
CSMD1-216ENST00000602557 CRYGCP07315 174 aa6.92□□□□□ -1.3
CSMD1-216ENST00000602557 FAM231DQ6ZW35 169 aa6.92□□□□□ -1.3
CSMD1-216ENST00000602557 RNF152Q8N8N0 203 aa6.92□□□□□ -1.3
CSMD1-216ENST00000602557 BAALCQ8WXS3 180 aa6.92□□□□□ -1.3
CSMD1-216ENST00000602557 ORMDL1Q9P0S3 153 aa6.91□□□□□ -1.3
CSMD1-216ENST00000602557 ATP6V0E1O15342 81 aa6.91□□□□□ -1.3
CSMD1-216ENST00000602557 NDUFB8O95169 186 aa6.91□□□□□ -1.3
CSMD1-216ENST00000602557 IGHV1OR15-1A0A075B7D0 117 aa6.91□□□□□ -1.3
CSMD1-216ENST00000602557 ACYP1P07311 99 aa6.91□□□□□ -1.3
CSMD1-216ENST00000602557 LINC01620Q4KN68 170 aa6.91□□□□□ -1.3
CSMD1-216ENST00000602557 DAND5Q8N907 189 aa6.91□□□□□ -1.3
CSMD1-216ENST00000602557 LINC01356Q8N9X3 169 aa6.91□□□□□ -1.3
CSMD1-216ENST00000602557 MAPK1IP1LQ8NDC0 245 aa6.91□□□□□ -1.3
CSMD1-216ENST00000602557 MTORP42345 2549 aa6.91□□□□□ -1.3
CSMD1-216ENST00000602557 I3L3M4 83 aa6.91□□□□□ -1.3
CSMD1-216ENST00000602557 FRMD6-AS1P0C7T7 363 aa6.91□□□□□ -1.3
CSMD1-216ENST00000602557 E9PQ18 207 aa6.91□□□□□ -1.3
CSMD1-216ENST00000602557 DEFB131AP59861 70 aa6.91□□□□□ -1.3
CSMD1-216ENST00000602557 IGHV4-28A0A0C4DH34 117 aa6.9□□□□□ -1.3
CSMD1-216ENST00000602557 NDUFS5O43920 106 aa6.9□□□□□ -1.3
CSMD1-216ENST00000602557 ATP6V0E2Q8NHE4 81 aa6.9□□□□□ -1.3
CSMD1-216ENST00000602557 C10orf105Q8TEF2 133 aa6.9□□□□□ -1.3
CSMD1-216ENST00000602557 RNF114Q9Y508 228 aa6.9□□□□□ -1.3
CSMD1-216ENST00000602557 NKAPP1Q8N9T2 125 aa6.9□□□□□ -1.3
CSMD1-216ENST00000602557 TRAV23DV6A0A075B6W5 121 aa6.9□□□□□ -1.3
CSMD1-216ENST00000602557 SDHAF1A6NFY7 115 aa6.9□□□□□ -1.3
CSMD1-216ENST00000602557 SPRY2O43597 315 aa6.9□□□□□ -1.3
CSMD1-216ENST00000602557 PRR30Q53SZ7 412 aaPredicted RBP6.9□□□□□ -1.3
CSMD1-216ENST00000602557 Q6ZR03 302 aa6.9□□□□□ -1.3
CSMD1-216ENST00000602557 A4D1N5 150 aa6.9□□□□□ -1.31
CSMD1-216ENST00000602557 IGKV1-39P01597 117 aa6.9□□□□□ -1.31
CSMD1-216ENST00000602557 IGKV1D-39P04432 117 aa6.9□□□□□ -1.31
CSMD1-216ENST00000602557 PRRC2CQ9Y520 2896 aaKnown RBP6.9□□□□□ -1.31
CSMD1-216ENST00000602557 E7EQL1 145 aa6.9□□□□□ -1.31
CSMD1-216ENST00000602557 G3V318 75 aa6.9□□□□□ -1.31
CSMD1-216ENST00000602557 C3orf22Q8N5N4 141 aa6.9□□□□□ -1.31
CSMD1-216ENST00000602557 CRIPAKQ8N1N5 446 aa6.89□□□□□ -1.31
CSMD1-216ENST00000602557 NDUFA4L2Q9NRX3 87 aa6.89□□□□□ -1.31
CSMD1-216ENST00000602557 TEX49A0A1B0GTD5 131 aa6.89□□□□□ -1.31
CSMD1-216ENST00000602557 ZNF561-AS1K7EIQ3 104 aa6.89□□□□□ -1.31
CSMD1-216ENST00000602557 MUSTN1Q8IVN3 82 aa6.89□□□□□ -1.31
CSMD1-216ENST00000602557 THAP8Q8NA92 274 aa6.89□□□□□ -1.31
CSMD1-216ENST00000602557 FXYD5Q96DB9 178 aa6.89□□□□□ -1.31
CSMD1-216ENST00000602557 RHODO00212 210 aa6.89□□□□□ -1.31
CSMD1-216ENST00000602557 CFHR4Q92496 578 aa6.89□□□□□ -1.31
CSMD1-216ENST00000602557 MLST8Q9BVC4 326 aa6.89□□□□□ -1.31
CSMD1-216ENST00000602557 RNF223E7ERA6 249 aa6.88□□□□□ -1.31
CSMD1-216ENST00000602557 C1orf195Q5TG92 126 aa6.88□□□□□ -1.31
CSMD1-216ENST00000602557 TEX36Q5VZQ5 186 aa6.88□□□□□ -1.31
CSMD1-216ENST00000602557 SDIM1Q6ZPB5 146 aa6.88□□□□□ -1.31
CSMD1-216ENST00000602557 C11orf52Q96A22 123 aa6.88□□□□□ -1.31
CSMD1-216ENST00000602557 CHD8Q9HCK8 2581 aa6.88□□□□□ -1.31
CSMD1-216ENST00000602557 MBD3L4A6NDZ8 208 aaPredicted RBP6.88□□□□□ -1.31
CSMD1-216ENST00000602557 MBD3L3A6NE82 208 aaPredicted RBP6.88□□□□□ -1.31
CSMD1-216ENST00000602557 MBD3L5A6NJ08 208 aaPredicted RBP6.88□□□□□ -1.31
CSMD1-216ENST00000602557 TCL1BO95988 128 aa6.88□□□□□ -1.31
CSMD1-216ENST00000602557 DEFB105AQ8NG35 78 aa6.88□□□□□ -1.31
CSMD1-216ENST00000602557 MBD3L2Q8NHZ7 208 aaPredicted RBP6.88□□□□□ -1.31
CSMD1-216ENST00000602557 RNF166Q96A37 237 aaPredicted RBP6.88□□□□□ -1.31
CSMD1-216ENST00000602557 FAM236DA0A1B0GTK5 79 aa6.88□□□□□ -1.31
CSMD1-216ENST00000602557 FAM236CP0DP71 79 aa6.88□□□□□ -1.31
CSMD1-216ENST00000602557 FHL1Q13642 323 aa6.88□□□□□ -1.31
CSMD1-216ENST00000602557 CLPSL2Q6UWE3 100 aa6.88□□□□□ -1.31
CSMD1-216ENST00000602557 ARTNQ5T4W7 220 aa6.88□□□□□ -1.31
CSMD1-216ENST00000602557 COX7B2Q8TF08 81 aa6.88□□□□□ -1.31
CSMD1-216ENST00000602557 RBAKDNA6NC62 111 aa6.88□□□□□ -1.31
CSMD1-216ENST00000602557 Q9H8V8 135 aa6.88□□□□□ -1.31
CSMD1-216ENST00000602557 LOXL1Q08397 574 aaPredicted RBP6.87□□□□□ -1.31
CSMD1-216ENST00000602557 IGLC6P0CF74 106 aa6.87□□□□□ -1.31
CSMD1-216ENST00000602557 RPL39LQ96EH5 51 aaKnown RBP6.87□□□□□ -1.31
CSMD1-216ENST00000602557 GATA4P43694 442 aa6.87□□□□□ -1.31
CSMD1-216ENST00000602557 ZNF833PQ6ZTB9 187 aa6.87□□□□□ -1.31
CSMD1-216ENST00000602557 WDR86Q86TI4 376 aa6.87□□□□□ -1.31
CSMD1-216ENST00000602557 C17orf82Q86X59 251 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms