RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 MGST1P10620 155 aaKnown RBP8.78□□□□□ -1
RPS28-204ENST00000602140 RNASE3P12724 160 aaKnown RBP8.78□□□□□ -1
RPS28-204ENST00000602140 SUMO1P63165 101 aaKnown RBP8.78□□□□□ -1
RPS28-204ENST00000602140 FLI1Q01543 452 aaPredicted RBP8.78□□□□□ -1
RPS28-204ENST00000602140 ZFP69Q49AA0 526 aa8.78□□□□□ -1
RPS28-204ENST00000602140 SMUG1Q53HV7 270 aa8.78□□□□□ -1
RPS28-204ENST00000602140 PRNTQ86SH4 94 aa8.78□□□□□ -1
RPS28-204ENST00000602140 OR2G3Q8NGZ4 309 aa8.78□□□□□ -1
RPS28-204ENST00000602140 ATP6V0E2Q8NHE4 81 aa8.78□□□□□ -1
RPS28-204ENST00000602140 SUN5Q8TC36 379 aa8.78□□□□□ -1
RPS28-204ENST00000602140 GTSF1LQ9H1H1 148 aa8.78□□□□□ -1
RPS28-204ENST00000602140 EPDR1Q9UM22 224 aa8.78□□□□□ -1
RPS28-204ENST00000602140 VPS13BQ7Z7G8 4022 aa8.77□□□□□ -1.01
RPS28-204ENST00000602140 GGTLC3B5MD39 225 aa8.77□□□□□ -1.01
RPS28-204ENST00000602140 ATP6V0CP27449 155 aa8.77□□□□□ -1.01
RPS28-204ENST00000602140 CYB561D1Q8N8Q1 229 aa8.77□□□□□ -1.01
RPS28-204ENST00000602140 PTH2Q96A98 100 aa8.77□□□□□ -1.01
RPS28-204ENST00000602140 PSMG3Q9BT73 122 aaPredicted RBP8.77□□□□□ -1.01
RPS28-204ENST00000602140 MBP02144 154 aa8.76□□□□□ -1.01
RPS28-204ENST00000602140 Q6ZSN1 163 aa8.76□□□□□ -1.01
RPS28-204ENST00000602140 Q8N3U1 123 aa8.76□□□□□ -1.01
RPS28-204ENST00000602140 TMEM167BQ9NRX6 74 aa8.76□□□□□ -1.01
RPS28-204ENST00000602140 FAM30AQ9NZY2 134 aa8.76□□□□□ -1.01
RPS28-204ENST00000602140 ALG5Q9Y673 324 aa8.76□□□□□ -1.01
RPS28-204ENST00000602140 CXorf1O96002 111 aa8.75□□□□□ -1.01
RPS28-204ENST00000602140 SERF2P84101 59 aa8.75□□□□□ -1.01
RPS28-204ENST00000602140 LAGE3Q14657 143 aa8.75□□□□□ -1.01
RPS28-204ENST00000602140 SAPCD1Q5SSQ6 148 aa8.75□□□□□ -1.01
RPS28-204ENST00000602140 LINC00479Q96M42 142 aa8.75□□□□□ -1.01
RPS28-204ENST00000602140 AQP10Q96PS8 301 aa8.75□□□□□ -1.01
RPS28-204ENST00000602140 TM2D2Q9BX73 214 aa8.75□□□□□ -1.01
RPS28-204ENST00000602140 ACTR3CQ9C0K3 210 aaPredicted RBP8.75□□□□□ -1.01
RPS28-204ENST00000602140 SH3BGRL3Q9H299 93 aa8.75□□□□□ -1.01
RPS28-204ENST00000602140 PARLQ9H300 379 aa8.75□□□□□ -1.01
RPS28-204ENST00000602140 TRAV34A0A0B4J273 112 aa8.74□□□□□ -1.01
RPS28-204ENST00000602140 IGKV3D-20A0A0C4DH25 116 aa8.74□□□□□ -1.01
RPS28-204ENST00000602140 GAGE12JA6NER3 117 aa8.74□□□□□ -1.01
RPS28-204ENST00000602140 A8MWV9 139 aa8.74□□□□□ -1.01
RPS28-204ENST00000602140 S100A4P26447 101 aaKnown RBP8.74□□□□□ -1.01
RPS28-204ENST00000602140 GAGE1Q13065 139 aa8.74□□□□□ -1.01
RPS28-204ENST00000602140 GAGE4Q13068 117 aa8.74□□□□□ -1.01
RPS28-204ENST00000602140 GAGE5Q13069 117 aa8.74□□□□□ -1.01
RPS28-204ENST00000602140 WFDC2Q14508 124 aa8.74□□□□□ -1.01
RPS28-204ENST00000602140 LGALSLQ3ZCW2 172 aaPredicted RBP8.74□□□□□ -1.01
RPS28-204ENST00000602140 GAGE13Q4V321 117 aa8.74□□□□□ -1.01
RPS28-204ENST00000602140 ZFP2Q6ZN57 461 aa8.74□□□□□ -1.01
RPS28-204ENST00000602140 TNFSF18Q9UNG2 199 aa8.74□□□□□ -1.01
RPS28-204ENST00000602140 FLG2Q5D862 2391 aaPredicted RBP8.73□□□□□ -1.01
RPS28-204ENST00000602140 ASIPP42127 132 aa8.73□□□□□ -1.01
RPS28-204ENST00000602140 DAZ4Q86SG3 579 aaKnown RBP8.73□□□□□ -1.01
RPS28-204ENST00000602140 OR2T35Q8NGX2 323 aa8.73□□□□□ -1.01
RPS28-204ENST00000602140 JPT2Q9H910 190 aa8.73□□□□□ -1.01
RPS28-204ENST00000602140 BATF3Q9NR55 127 aa8.73□□□□□ -1.01
RPS28-204ENST00000602140 DAZ3Q9NR90 486 aaKnown RBP8.73□□□□□ -1.01
RPS28-204ENST00000602140 Q9UF83 564 aa8.73□□□□□ -1.01
RPS28-204ENST00000602140 ARL2-SNX15V9GYD0 113 aa8.73□□□□□ -1.01
RPS28-204ENST00000602140 DNAH8Q96JB1 4490 aa8.72□□□□□ -1.01
RPS28-204ENST00000602140 TRAV8-3A0A0A6YYJ7 113 aa8.72□□□□□ -1.01
RPS28-204ENST00000602140 A0A1W2PRE2 83 aa8.72□□□□□ -1.01
RPS28-204ENST00000602140 FABP5P3A8MUU1 101 aa8.72□□□□□ -1.01
RPS28-204ENST00000602140 LECT2O14960 151 aa8.72□□□□□ -1.01
RPS28-204ENST00000602140 C1QBP02746 253 aa8.72□□□□□ -1.01
RPS28-204ENST00000602140 LINC00694P0DN24 101 aa8.72□□□□□ -1.01
RPS28-204ENST00000602140 PIK3CD-AS1Q5SR53 167 aa8.72□□□□□ -1.01
RPS28-204ENST00000602140 SAMD10Q9BYL1 202 aa8.72□□□□□ -1.01
RPS28-204ENST00000602140 IFNA7P01567 189 aa8.71□□□□□ -1.02
RPS28-204ENST00000602140 Q5BKY6 102 aa8.71□□□□□ -1.02
RPS28-204ENST00000602140 C14orf178Q8N769 122 aaPredicted RBP8.71□□□□□ -1.02
RPS28-204ENST00000602140 MED28Q9H204 178 aa8.71□□□□□ -1.02
RPS28-204ENST00000602140 IL36BQ9NZH7 164 aa8.71□□□□□ -1.02
RPS28-204ENST00000602140 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.7□□□□□ -1.02
RPS28-204ENST00000602140 A0A087WWC5 75 aa8.7□□□□□ -1.02
RPS28-204ENST00000602140 B4DEV8 164 aa8.7□□□□□ -1.02
RPS28-204ENST00000602140 H3BVH4 76 aa8.7□□□□□ -1.02
RPS28-204ENST00000602140 FGF8P55075 233 aaPredicted RBP8.7□□□□□ -1.02
RPS28-204ENST00000602140 UBE2G2P60604 165 aa8.7□□□□□ -1.02
RPS28-204ENST00000602140 ZNF726P1Q15940 193 aa8.7□□□□□ -1.02
RPS28-204ENST00000602140 TOR2AQ5JU69 321 aa8.7□□□□□ -1.02
RPS28-204ENST00000602140 RPL7L1Q6DKI1 246 aaKnown RBP8.7□□□□□ -1.02
RPS28-204ENST00000602140 UFSP1Q6NVU6 142 aa8.7□□□□□ -1.02
RPS28-204ENST00000602140 M0R036 132 aa8.69□□□□□ -1.02
RPS28-204ENST00000602140 PEX7O00628 323 aa8.69□□□□□ -1.02
RPS28-204ENST00000602140 Q6ZSA8 131 aa8.69□□□□□ -1.02
RPS28-204ENST00000602140 Q86TA4 180 aa8.69□□□□□ -1.02
RPS28-204ENST00000602140 INO80EQ8NBZ0 244 aaPredicted RBP8.69□□□□□ -1.02
RPS28-204ENST00000602140 BAALCQ8WXS3 180 aa8.69□□□□□ -1.02
RPS28-204ENST00000602140 BORCS7-ASMTA0A0B4J1R7 106 aa8.68□□□□□ -1.02
RPS28-204ENST00000602140 CTXND1A0A1B0GTU2 59 aa8.68□□□□□ -1.02
RPS28-204ENST00000602140 GRIFINA4D1Z8 144 aa8.68□□□□□ -1.02
RPS28-204ENST00000602140 RNF222A6NCQ9 220 aa8.68□□□□□ -1.02
RPS28-204ENST00000602140 KRBOX1C9JBD0 128 aa8.68□□□□□ -1.02
RPS28-204ENST00000602140 RHODO00212 210 aa8.68□□□□□ -1.02
RPS28-204ENST00000602140 ARMS2P0C7Q2 107 aa8.68□□□□□ -1.02
RPS28-204ENST00000602140 CRIP1P50238 77 aa8.68□□□□□ -1.02
RPS28-204ENST00000602140 FAM74A4Q5TZK3 123 aa8.68□□□□□ -1.02
RPS28-204ENST00000602140 SYT8Q8NBV8 401 aa8.68□□□□□ -1.02
RPS28-204ENST00000602140 ZC2HC1AQ96GY0 325 aa8.68□□□□□ -1.02
RPS28-204ENST00000602140 URGCP-MRPS24S4R325 110 aa8.68□□□□□ -1.02
RPS28-204ENST00000602140 FAM74A7A6NL05 159 aa8.67□□□□□ -1.02
RPS28-204ENST00000602140 J3QL48 77 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms