RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 NFE4Q86UQ8 179 aa17.71■□□□□ 0.43
PNKP-216ENST00000601816 LRP1BQ9NZR2 4599 aa17.71■□□□□ 0.42
PNKP-216ENST00000601816 TRBV6-4A0A1B0GX49 114 aa17.7■□□□□ 0.42
PNKP-216ENST00000601816 DNAH10OSP0CZ25 163 aa17.7■□□□□ 0.42
PNKP-216ENST00000601816 ASIPP42127 132 aa17.7■□□□□ 0.42
PNKP-216ENST00000601816 FHITP49789 147 aa17.7■□□□□ 0.42
PNKP-216ENST00000601816 TIRAPP58753 221 aa17.7■□□□□ 0.42
PNKP-216ENST00000601816 CST9LP1Q5W188 147 aa17.7■□□□□ 0.42
PNKP-216ENST00000601816 TNFRSF18Q9Y5U5 241 aa17.7■□□□□ 0.42
PNKP-216ENST00000601816 CDK2AP2O75956 126 aa17.69■□□□□ 0.42
PNKP-216ENST00000601816 KRTAP10-2P60368 255 aa17.69■□□□□ 0.42
PNKP-216ENST00000601816 UBE2G1P62253 170 aa17.69■□□□□ 0.42
PNKP-216ENST00000601816 FMC1Q96HJ9 113 aa17.69■□□□□ 0.42
PNKP-216ENST00000601816 TCEAL7Q9BRU2 100 aa17.69■□□□□ 0.42
PNKP-216ENST00000601816 ZFP30Q9Y2G7 519 aa17.69■□□□□ 0.42
PNKP-216ENST00000601816 HMSDA8MTL9 139 aa17.68■□□□□ 0.42
PNKP-216ENST00000601816 OR11H4Q8NGC9 324 aa17.68■□□□□ 0.42
PNKP-216ENST00000601816 ZC2HC1AQ96GY0 325 aa17.68■□□□□ 0.42
PNKP-216ENST00000601816 A0A0D9SG52 128 aa17.67■□□□□ 0.42
PNKP-216ENST00000601816 B4DEV8 164 aa17.67■□□□□ 0.42
PNKP-216ENST00000601816 SEC11BP0C7V7 166 aa17.67■□□□□ 0.42
PNKP-216ENST00000601816 MGST1P10620 155 aaKnown RBP17.67■□□□□ 0.42
PNKP-216ENST00000601816 FAM213BQ8TBF2 198 aa17.67■□□□□ 0.42
PNKP-216ENST00000601816 MSRB1Q9NZV6 116 aa17.67■□□□□ 0.42
PNKP-216ENST00000601816 PCLOQ9Y6V0 5065 aa17.66■□□□□ 0.42
PNKP-216ENST00000601816 KANTRA0A1W2PQU2 76 aa17.66■□□□□ 0.42
PNKP-216ENST00000601816 UMAD1C9J7I0 102 aa17.66■□□□□ 0.42
PNKP-216ENST00000601816 CRIP1P50238 77 aa17.66■□□□□ 0.42
PNKP-216ENST00000601816 ERVFC1-1P60608 527 aa17.66■□□□□ 0.42
PNKP-216ENST00000601816 LGALSLQ3ZCW2 172 aaPredicted RBP17.66■□□□□ 0.42
PNKP-216ENST00000601816 PIK3CD-AS1Q5SR53 167 aa17.66■□□□□ 0.42
PNKP-216ENST00000601816 COX8CQ7Z4L0 72 aa17.66■□□□□ 0.42
PNKP-216ENST00000601816 ZNF471Q9BX82 626 aaPredicted RBP17.66■□□□□ 0.42
PNKP-216ENST00000601816 IL36BQ9NZH7 164 aa17.66■□□□□ 0.42
PNKP-216ENST00000601816 TRBV6-1A0A0K0K1D8 114 aa17.65■□□□□ 0.42
PNKP-216ENST00000601816 A8MWV9 139 aa17.65■□□□□ 0.42
PNKP-216ENST00000601816 EREGO14944 169 aa17.65■□□□□ 0.42
PNKP-216ENST00000601816 BCL2L11O43521 198 aa17.65■□□□□ 0.42
PNKP-216ENST00000601816 SH2D1AO60880 128 aa17.65■□□□□ 0.42
PNKP-216ENST00000601816 CRYGDP07320 174 aa17.65■□□□□ 0.42
PNKP-216ENST00000601816 FAM162BQ5T6X4 162 aa17.65■□□□□ 0.42
PNKP-216ENST00000601816 C10orf126Q8N4M7 172 aa17.65■□□□□ 0.42
PNKP-216ENST00000601816 SFT2D1Q8WV19 159 aa17.65■□□□□ 0.42
PNKP-216ENST00000601816 PARLQ9H300 379 aa17.65■□□□□ 0.42
PNKP-216ENST00000601816 HSPG2P98160 4391 aa17.65■□□□□ 0.42
PNKP-216ENST00000601816 KRBOX1C9JBD0 128 aa17.64■□□□□ 0.41
PNKP-216ENST00000601816 H3BVH4 76 aa17.64■□□□□ 0.41
PNKP-216ENST00000601816 M0R036 132 aa17.64■□□□□ 0.41
PNKP-216ENST00000601816 PAGE4O60829 102 aa17.64■□□□□ 0.41
PNKP-216ENST00000601816 AKR1C3P42330 323 aa17.64■□□□□ 0.41
PNKP-216ENST00000601816 TRAV8-6A0A0B4J262 113 aa17.63■□□□□ 0.41
PNKP-216ENST00000601816 IGHV3-38A0A0C4DH36 116 aa17.63■□□□□ 0.41
PNKP-216ENST00000601816 ZFP2Q6ZN57 461 aa17.63■□□□□ 0.41
PNKP-216ENST00000601816 MBD3L1Q8WWY6 194 aa17.63■□□□□ 0.41
PNKP-216ENST00000601816 LTAP01374 205 aa17.62■□□□□ 0.41
PNKP-216ENST00000601816 EIF5AP63241 154 aaKnown RBP17.62■□□□□ 0.41
PNKP-216ENST00000601816 DNLZQ5SXM8 178 aa17.62■□□□□ 0.41
PNKP-216ENST00000601816 A0A1B0GV50 99 aa17.61■□□□□ 0.41
PNKP-216ENST00000601816 OR10J3Q5JRS4 329 aa17.61■□□□□ 0.41
PNKP-216ENST00000601816 SYT8Q8NBV8 401 aa17.61■□□□□ 0.41
PNKP-216ENST00000601816 BOLA1Q9Y3E2 137 aa17.61■□□□□ 0.41
PNKP-216ENST00000601816 GRIFINA4D1Z8 144 aa17.6■□□□□ 0.41
PNKP-216ENST00000601816 ARMS2P0C7Q2 107 aa17.6■□□□□ 0.41
PNKP-216ENST00000601816 ZNF674Q2M3X9 581 aa17.6■□□□□ 0.41
PNKP-216ENST00000601816 LINC01556Q5JQF7 62 aa17.6■□□□□ 0.41
PNKP-216ENST00000601816 Q6ZSN1 163 aa17.6■□□□□ 0.41
PNKP-216ENST00000601816 ATP6V0E2Q8NHE4 81 aa17.6■□□□□ 0.41
PNKP-216ENST00000601816 PFDN1O60925 122 aa17.59■□□□□ 0.41
PNKP-216ENST00000601816 LELP1Q5T871 98 aa17.59■□□□□ 0.41
PNKP-216ENST00000601816 DMRTA1Q5VZB9 504 aa17.59■□□□□ 0.41
PNKP-216ENST00000601816 GTSF1LQ9H1H1 148 aa17.59■□□□□ 0.41
PNKP-216ENST00000601816 JPT2Q9H910 190 aa17.59■□□□□ 0.41
PNKP-216ENST00000601816 PGPEP1Q9NXJ5 209 aa17.59■□□□□ 0.41
PNKP-216ENST00000601816 A0A087WTM6 91 aa17.58■□□□□ 0.4
PNKP-216ENST00000601816 LINC01559Q495D7 138 aa17.58■□□□□ 0.4
PNKP-216ENST00000601816 DNAH5Q8TE73 4624 aa17.57■□□□□ 0.4
PNKP-216ENST00000601816 TMSB15BA0A087X1C1 80 aa17.57■□□□□ 0.4
PNKP-216ENST00000601816 S100A9P06702 114 aaKnown RBP17.57■□□□□ 0.4
PNKP-216ENST00000601816 H2AFB1P0C5Y9 115 aa17.57■□□□□ 0.4
PNKP-216ENST00000601816 TPT1P13693 172 aaKnown RBP17.57■□□□□ 0.4
PNKP-216ENST00000601816 TMUB2Q71RG4 321 aa17.57■□□□□ 0.4
PNKP-216ENST00000601816 MAPKAPK5-AS1Q8N8E1 139 aa17.57■□□□□ 0.4
PNKP-216ENST00000601816 SAMD10Q9BYL1 202 aa17.57■□□□□ 0.4
PNKP-216ENST00000601816 PHLDA3Q9Y5J5 127 aa17.57■□□□□ 0.4
PNKP-216ENST00000601816 APOBP04114 4563 aaKnown RBP17.56■□□□□ 0.4
PNKP-216ENST00000601816 GAGE12JA6NER3 117 aa17.56■□□□□ 0.4
PNKP-216ENST00000601816 RHODO00212 210 aa17.56■□□□□ 0.4
PNKP-216ENST00000601816 GAGE1Q13065 139 aa17.56■□□□□ 0.4
PNKP-216ENST00000601816 GAGE4Q13068 117 aa17.56■□□□□ 0.4
PNKP-216ENST00000601816 GAGE5Q13069 117 aa17.56■□□□□ 0.4
PNKP-216ENST00000601816 GAGE13Q4V321 117 aa17.56■□□□□ 0.4
PNKP-216ENST00000601816 UFSP1Q6NVU6 142 aa17.56■□□□□ 0.4
PNKP-216ENST00000601816 SCO2A0A1W2PP80 73 aa17.55■□□□□ 0.4
PNKP-216ENST00000601816 CDPF1Q6NVV7 123 aa17.55■□□□□ 0.4
PNKP-216ENST00000601816 SCRT2Q9NQ03 307 aa17.55■□□□□ 0.4
PNKP-216ENST00000601816 LINC00694P0DN24 101 aa17.54■□□□□ 0.4
PNKP-216ENST00000601816 FUSP35637 526 aaKnown RBP eCLIP17.54■□□□□ 0.4
PNKP-216ENST00000601816 KRTAP4-5Q9BYR2 181 aa17.54■□□□□ 0.4
PNKP-216ENST00000601816 IBA57-AS1B1ANH7 110 aa17.53■□□□□ 0.4
PNKP-216ENST00000601816 FAM74A4Q5TZK3 123 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms