RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 ASIPP42127 132 aa8.33□□□□□ -1.08
CHMP2A-207ENST00000600804 FOXA3P55318 350 aaPredicted RBP8.33□□□□□ -1.08
CHMP2A-207ENST00000600804 LGALS9BQ3B8N2 356 aa8.33□□□□□ -1.08
CHMP2A-207ENST00000600804 LINC00612Q8N6U2 182 aa8.33□□□□□ -1.08
CHMP2A-207ENST00000600804 C15orf54Q8N8G6 183 aa8.33□□□□□ -1.08
CHMP2A-207ENST00000600804 OR2D3Q8NGH3 330 aa8.33□□□□□ -1.08
CHMP2A-207ENST00000600804 C9orf85Q96MD7 179 aa8.33□□□□□ -1.08
CHMP2A-207ENST00000600804 SSBP4Q9BWG4 385 aaPredicted RBP8.33□□□□□ -1.08
CHMP2A-207ENST00000600804 SCRT2Q9NQ03 307 aa8.33□□□□□ -1.08
CHMP2A-207ENST00000600804 TIMM8BQ9Y5J9 83 aaPredicted RBP8.33□□□□□ -1.08
CHMP2A-207ENST00000600804 A0A1W2PPQ1 181 aa8.32□□□□□ -1.08
CHMP2A-207ENST00000600804 A8MWL6 223 aa8.32□□□□□ -1.08
CHMP2A-207ENST00000600804 SNURFLB1AK76 121 aa8.32□□□□□ -1.08
CHMP2A-207ENST00000600804 M0R036 132 aa8.32□□□□□ -1.08
CHMP2A-207ENST00000600804 PPP1R2P9O14990 202 aa8.32□□□□□ -1.08
CHMP2A-207ENST00000600804 GATCO43716 136 aaKnown RBP8.32□□□□□ -1.08
CHMP2A-207ENST00000600804 PRM2P04554 102 aa8.32□□□□□ -1.08
CHMP2A-207ENST00000600804 OR5AL1P0C617 328 aa8.32□□□□□ -1.08
CHMP2A-207ENST00000600804 RNASE3P12724 160 aaKnown RBP8.32□□□□□ -1.08
CHMP2A-207ENST00000600804 RPL19P84098 196 aaKnown RBP8.32□□□□□ -1.08
CHMP2A-207ENST00000600804 SLC7A5P1Q8MH63 180 aa8.32□□□□□ -1.08
CHMP2A-207ENST00000600804 OR10G8Q8NGN5 311 aa8.32□□□□□ -1.08
CHMP2A-207ENST00000600804 ANAPC16Q96DE5 110 aa8.32□□□□□ -1.08
CHMP2A-207ENST00000600804 C18orf15Q96N68 181 aa8.32□□□□□ -1.08
CHMP2A-207ENST00000600804 GFRA4Q9GZZ7 299 aa8.32□□□□□ -1.08
CHMP2A-207ENST00000600804 GSN-AS1Q9NRJ2 163 aa8.32□□□□□ -1.08
CHMP2A-207ENST00000600804 MDFICQ9P1T7 246 aa8.32□□□□□ -1.08
CHMP2A-207ENST00000600804 V9GYV3 84 aa8.32□□□□□ -1.08
CHMP2A-207ENST00000600804 FAT2Q9NYQ8 4349 aa8.32□□□□□ -1.08
CHMP2A-207ENST00000600804 SNAI2O43623 268 aa8.31□□□□□ -1.08
CHMP2A-207ENST00000600804 SPINK4O60575 86 aa8.31□□□□□ -1.08
CHMP2A-207ENST00000600804 IGLC6P0CF74 106 aa8.31□□□□□ -1.08
CHMP2A-207ENST00000600804 S100A4P26447 101 aaKnown RBP8.31□□□□□ -1.08
CHMP2A-207ENST00000600804 WDR73Q6P4I2 378 aa8.31□□□□□ -1.08
CHMP2A-207ENST00000600804 RASL10AQ92737 203 aa8.31□□□□□ -1.08
CHMP2A-207ENST00000600804 DKK2Q9UBU2 259 aa8.31□□□□□ -1.08
CHMP2A-207ENST00000600804 DNAH17Q9UFH2 4485 aa8.31□□□□□ -1.08
CHMP2A-207ENST00000600804 A0A0J9YWU9 116 aa8.3□□□□□ -1.08
CHMP2A-207ENST00000600804 F2Z2F3 143 aa8.3□□□□□ -1.08
CHMP2A-207ENST00000600804 M0R2P5 195 aa8.3□□□□□ -1.08
CHMP2A-207ENST00000600804 NXPH4O95158 308 aa8.3□□□□□ -1.08
CHMP2A-207ENST00000600804 MT-ND4LP03901 98 aa8.3□□□□□ -1.08
CHMP2A-207ENST00000600804 SPART-AS1P0CW21 52 aa8.3□□□□□ -1.08
CHMP2A-207ENST00000600804 RHEBQ15382 184 aa8.3□□□□□ -1.08
CHMP2A-207ENST00000600804 SVBPQ8N300 66 aa8.3□□□□□ -1.08
CHMP2A-207ENST00000600804 TSKUQ8WUA8 353 aa8.3□□□□□ -1.08
CHMP2A-207ENST00000600804 CNFNQ9BYD5 112 aa8.3□□□□□ -1.08
CHMP2A-207ENST00000600804 TMEM242Q9NWH2 141 aa8.3□□□□□ -1.08
CHMP2A-207ENST00000600804 NACAE9PAV3 2078 aa8.3□□□□□ -1.08
CHMP2A-207ENST00000600804 IGHV4-4A0A075B6R2 117 aa8.29□□□□□ -1.08
CHMP2A-207ENST00000600804 A0A087WWC5 75 aa8.29□□□□□ -1.08
CHMP2A-207ENST00000600804 TMSB15BA0A087X1C1 80 aa8.29□□□□□ -1.08
CHMP2A-207ENST00000600804 ARMS2P0C7Q2 107 aa8.29□□□□□ -1.08
CHMP2A-207ENST00000600804 CTRLP40313 264 aa8.29□□□□□ -1.08
CHMP2A-207ENST00000600804 RNF212Q495C1 297 aa8.29□□□□□ -1.08
CHMP2A-207ENST00000600804 FAM222AQ5U5X8 452 aa8.29□□□□□ -1.08
CHMP2A-207ENST00000600804 FER1L6-AS1Q8NA97 138 aa8.29□□□□□ -1.08
CHMP2A-207ENST00000600804 CTDSP1Q9GZU7 261 aa8.29□□□□□ -1.08
CHMP2A-207ENST00000600804 NOP10Q9NPE3 64 aaKnown RBP8.29□□□□□ -1.08
CHMP2A-207ENST00000600804 DYNC1H1Q14204 4646 aaKnown RBP8.29□□□□□ -1.08
CHMP2A-207ENST00000600804 SMIM27A0A1W2PRY6 76 aa8.28□□□□□ -1.08
CHMP2A-207ENST00000600804 GRIFINA4D1Z8 144 aa8.28□□□□□ -1.08
CHMP2A-207ENST00000600804 H3BVH4 76 aa8.28□□□□□ -1.08
CHMP2A-207ENST00000600804 CLRN3Q8NCR9 226 aa8.28□□□□□ -1.08
CHMP2A-207ENST00000600804 GTSF1Q8WW33 167 aa8.28□□□□□ -1.08
CHMP2A-207ENST00000600804 IMMP2LQ96T52 175 aa8.28□□□□□ -1.08
CHMP2A-207ENST00000600804 CXorf65A6NEN9 183 aa8.27□□□□□ -1.09
CHMP2A-207ENST00000600804 DEFB4AO15263 64 aa8.27□□□□□ -1.09
CHMP2A-207ENST00000600804 SNAPINO95295 136 aa8.27□□□□□ -1.09
CHMP2A-207ENST00000600804 APOC3P02656 99 aa8.27□□□□□ -1.09
CHMP2A-207ENST00000600804 EMP1P54849 157 aa8.27□□□□□ -1.09
CHMP2A-207ENST00000600804 CACNG7P62955 275 aa8.27□□□□□ -1.09
CHMP2A-207ENST00000600804 ZFP82Q8N141 532 aa8.27□□□□□ -1.09
CHMP2A-207ENST00000600804 SYT8Q8NBV8 401 aa8.27□□□□□ -1.09
CHMP2A-207ENST00000600804 LINC00476Q8WZB0 136 aa8.27□□□□□ -1.09
CHMP2A-207ENST00000600804 PHLDA3Q9Y5J5 127 aa8.27□□□□□ -1.09
CHMP2A-207ENST00000600804 PKHD1P08F94 4074 aa8.26□□□□□ -1.09
CHMP2A-207ENST00000600804 TRGV1A0A0A0MS02 117 aa8.26□□□□□ -1.09
CHMP2A-207ENST00000600804 C7orf77A4D0Y5 90 aa8.26□□□□□ -1.09
CHMP2A-207ENST00000600804 CIDEAO60543 219 aa8.26□□□□□ -1.09
CHMP2A-207ENST00000600804 GZMBP10144 247 aa8.26□□□□□ -1.09
CHMP2A-207ENST00000600804 C12orf74Q32Q52 190 aa8.26□□□□□ -1.09
CHMP2A-207ENST00000600804 ZNF876PQ49A33 203 aa8.26□□□□□ -1.09
CHMP2A-207ENST00000600804 Q6ZTI0 123 aa8.26□□□□□ -1.09
CHMP2A-207ENST00000600804 C11orf45Q8TAV5 145 aa8.26□□□□□ -1.09
CHMP2A-207ENST00000600804 NAT8BQ9UHF3 227 aa8.26□□□□□ -1.09
CHMP2A-207ENST00000600804 CELA1Q9UNI1 258 aa8.26□□□□□ -1.09
CHMP2A-207ENST00000600804 HIGD1CA8MV81 97 aa8.25□□□□□ -1.09
CHMP2A-207ENST00000600804 A8MWV9 139 aa8.25□□□□□ -1.09
CHMP2A-207ENST00000600804 DAD1P61803 113 aa8.25□□□□□ -1.09
CHMP2A-207ENST00000600804 DMRTA1Q5VZB9 504 aa8.25□□□□□ -1.09
CHMP2A-207ENST00000600804 LYZL1Q6UWQ5 148 aa8.25□□□□□ -1.09
CHMP2A-207ENST00000600804 OR10AG1Q8NH19 301 aa8.25□□□□□ -1.09
CHMP2A-207ENST00000600804 DNAH11Q96DT5 4516 aa8.25□□□□□ -1.09
CHMP2A-207ENST00000600804 TRAV4A0A0B4J268 109 aa8.24□□□□□ -1.09
CHMP2A-207ENST00000600804 RS1O15537 224 aa8.24□□□□□ -1.09
CHMP2A-207ENST00000600804 NUP35Q8NFH5 326 aa8.24□□□□□ -1.09
CHMP2A-207ENST00000600804 MRPL16Q9NX20 251 aaKnown RBP8.24□□□□□ -1.09
CHMP2A-207ENST00000600804 PKD1P98161 4303 aa8.24□□□□□ -1.09
CHMP2A-207ENST00000600804 TRAV9-1A0A075B6T8 112 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms