RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 BEAN1Q3B7T3 259 aa14.82□□□□□ -0.04
PNKP-214ENST00000600573 FAM19A2Q8N3H0 131 aa14.82□□□□□ -0.04
PNKP-214ENST00000600573 GSN-AS1Q9NRJ2 163 aa14.82□□□□□ -0.04
PNKP-214ENST00000600573 IGKV3-20P01619 116 aa14.81□□□□□ -0.04
PNKP-214ENST00000600573 LINC00614P0C842 121 aa14.81□□□□□ -0.04
PNKP-214ENST00000600573 CKS2P33552 79 aa14.81□□□□□ -0.04
PNKP-214ENST00000600573 ODF3L2Q3SX64 289 aa14.81□□□□□ -0.04
PNKP-214ENST00000600573 RNF185Q96GF1 192 aa14.81□□□□□ -0.04
PNKP-214ENST00000600573 C20orf144Q9BQM9 153 aa14.81□□□□□ -0.04
PNKP-214ENST00000600573 TRAV12-3A0A0B4J271 114 aa14.81□□□□□ -0.04
PNKP-214ENST00000600573 SPINK13Q1W4C9 94 aa14.81□□□□□ -0.04
PNKP-214ENST00000600573 C9orf66Q5T8R8 295 aa14.81□□□□□ -0.04
PNKP-214ENST00000600573 MCRIP2Q9BUT9 160 aaKnown RBP14.81□□□□□ -0.04
PNKP-214ENST00000600573 RAB4AP20338 218 aa14.8□□□□□ -0.04
PNKP-214ENST00000600573 FA2HQ7L5A8 372 aa14.8□□□□□ -0.04
PNKP-214ENST00000600573 STHQ8IWL8 128 aa14.8□□□□□ -0.04
PNKP-214ENST00000600573 LAMTOR2Q9Y2Q5 125 aa14.8□□□□□ -0.04
PNKP-214ENST00000600573 TIMM8BQ9Y5J9 83 aaPredicted RBP14.8□□□□□ -0.04
PNKP-214ENST00000600573 C2CD3Q4AC94 2353 aa14.8□□□□□ -0.04
PNKP-214ENST00000600573 KRTDAPP60985 99 aa14.79□□□□□ -0.04
PNKP-214ENST00000600573 SCRT2Q9NQ03 307 aa14.79□□□□□ -0.04
PNKP-214ENST00000600573 NUTF2P61970 127 aaKnown RBP14.78□□□□□ -0.04
PNKP-214ENST00000600573 PHLDA3Q9Y5J5 127 aa14.78□□□□□ -0.04
PNKP-214ENST00000600573 IGHV1OR15-1A0A075B7D0 117 aa14.77□□□□□ -0.04
PNKP-214ENST00000600573 IGHV1-24A0A0C4DH33 117 aa14.77□□□□□ -0.04
PNKP-214ENST00000600573 PRSS3P2Q8NHM4 247 aa14.77□□□□□ -0.04
PNKP-214ENST00000600573 NCR2O95944 276 aa14.77□□□□□ -0.05
PNKP-214ENST00000600573 AP5S1Q9NUS5 200 aa14.77□□□□□ -0.05
PNKP-214ENST00000600573 TRGV11A0A075B6L2 103 aa14.76□□□□□ -0.05
PNKP-214ENST00000600573 TRAV12-2A0A075B6T6 113 aa14.76□□□□□ -0.05
PNKP-214ENST00000600573 SMKR1H3BMG3 65 aa14.76□□□□□ -0.05
PNKP-214ENST00000600573 GNRH2O43555 120 aa14.76□□□□□ -0.05
PNKP-214ENST00000600573 NXPH4O95158 308 aa14.76□□□□□ -0.05
PNKP-214ENST00000600573 NPYP01303 97 aa14.76□□□□□ -0.05
PNKP-214ENST00000600573 RNASE3P12724 160 aaKnown RBP14.76□□□□□ -0.05
PNKP-214ENST00000600573 EVI2AP22794 236 aa14.76□□□□□ -0.05
PNKP-214ENST00000600573 LINC00467Q9BRT7 94 aa14.76□□□□□ -0.05
PNKP-214ENST00000600573 ZNF747Q9BV97 191 aa14.76□□□□□ -0.05
PNKP-214ENST00000600573 M0R381 172 aa14.75□□□□□ -0.05
PNKP-214ENST00000600573 TRPT1Q86TN4 253 aaKnown RBP14.75□□□□□ -0.05
PNKP-214ENST00000600573 WFDC9Q8NEX5 89 aa14.75□□□□□ -0.05
PNKP-214ENST00000600573 MAP1LC3AQ9H492 121 aa14.75□□□□□ -0.05
PNKP-214ENST00000600573 AGRNO00468 2067 aa14.74□□□□□ -0.05
PNKP-214ENST00000600573 RBMY1BA6NDE4 496 aaKnown RBP14.74□□□□□ -0.05
PNKP-214ENST00000600573 RBMY1EA6NEQ0 496 aaKnown RBP14.74□□□□□ -0.05
PNKP-214ENST00000600573 CRXO43186 299 aaPredicted RBP14.74□□□□□ -0.05
PNKP-214ENST00000600573 CD7P09564 240 aa14.74□□□□□ -0.05
PNKP-214ENST00000600573 RBMY1DP0C7P1 496 aaKnown RBP14.74□□□□□ -0.05
PNKP-214ENST00000600573 C3orf79P0CE67 100 aa14.74□□□□□ -0.05
PNKP-214ENST00000600573 PKIAP61925 76 aa14.74□□□□□ -0.05
PNKP-214ENST00000600573 INSP01308 110 aa14.74□□□□□ -0.05
PNKP-214ENST00000600573 ZNF124Q15973 351 aa14.74□□□□□ -0.05
PNKP-214ENST00000600573 PMCHL1Q16048 86 aa14.74□□□□□ -0.05
PNKP-214ENST00000600573 KRTAP24-1Q3LI83 254 aa14.74□□□□□ -0.05
PNKP-214ENST00000600573 MRAP2Q96G30 205 aa14.74□□□□□ -0.05
PNKP-214ENST00000600573 AP1S3Q96PC3 154 aa14.74□□□□□ -0.05
PNKP-214ENST00000600573 NIPBLQ6KC79 2804 aaeCLIP14.73□□□□□ -0.05
PNKP-214ENST00000600573 SETD2Q9BYW2 2564 aaPredicted RBP14.73□□□□□ -0.05
PNKP-214ENST00000600573 TSTD3H0UI37 97 aa14.73□□□□□ -0.05
PNKP-214ENST00000600573 IFI27P40305 119 aaPredicted RBP14.73□□□□□ -0.05
PNKP-214ENST00000600573 DPH3P1Q9H4G8 78 aa14.73□□□□□ -0.05
PNKP-214ENST00000600573 IGHV3-16A0A0C4DH30 117 aa14.72□□□□□ -0.05
PNKP-214ENST00000600573 LOC389332A0A1B0GUA5 103 aa14.72□□□□□ -0.05
PNKP-214ENST00000600573 TEX43Q6ZNM6 134 aa14.72□□□□□ -0.05
PNKP-214ENST00000600573 C19orf73Q9NVV2 129 aa14.72□□□□□ -0.05
PNKP-214ENST00000600573 LEPROTL1O95214 131 aa14.71□□□□□ -0.05
PNKP-214ENST00000600573 TNFRSF6BO95407 300 aa14.71□□□□□ -0.05
PNKP-214ENST00000600573 Q8N976 141 aa14.71□□□□□ -0.05
PNKP-214ENST00000600573 TMEM158Q8WZ71 300 aa14.71□□□□□ -0.05
PNKP-214ENST00000600573 BTF3P20290 206 aaKnown RBP14.7□□□□□ -0.06
PNKP-214ENST00000600573 MORN3Q6PF18 240 aaPredicted RBP14.7□□□□□ -0.06
PNKP-214ENST00000600573 Q8N1Y9 231 aa14.7□□□□□ -0.06
PNKP-214ENST00000600573 SYT8Q8NBV8 401 aa14.7□□□□□ -0.06
PNKP-214ENST00000600573 C9orf85Q96MD7 179 aa14.7□□□□□ -0.06
PNKP-214ENST00000600573 NXT2Q9NPJ8 142 aaKnown RBP14.7□□□□□ -0.06
PNKP-214ENST00000600573 HSPB8Q9UJY1 196 aa14.7□□□□□ -0.06
PNKP-214ENST00000600573 FXYD7P58549 80 aa14.7□□□□□ -0.06
PNKP-214ENST00000600573 SHISA2Q6UWI4 295 aa14.7□□□□□ -0.06
PNKP-214ENST00000600573 GTSCR1Q86UQ5 136 aa14.7□□□□□ -0.06
PNKP-214ENST00000600573 CBY3A6NI87 242 aa14.69□□□□□ -0.06
PNKP-214ENST00000600573 C1QTNF4Q9BXJ3 329 aa14.69□□□□□ -0.06
PNKP-214ENST00000600573 SPRY2O43597 315 aa14.68□□□□□ -0.06
PNKP-214ENST00000600573 ZNF664Q8N3J9 261 aa14.68□□□□□ -0.06
PNKP-214ENST00000600573 TMEM70Q9BUB7 260 aa14.68□□□□□ -0.06
PNKP-214ENST00000600573 PRO1933Q9H354 126 aa14.68□□□□□ -0.06
PNKP-214ENST00000600573 LINC01546A6NGU7 62 aa14.67□□□□□ -0.06
PNKP-214ENST00000600573 WIPF1O43516 503 aa14.67□□□□□ -0.06
PNKP-214ENST00000600573 C3orf56Q8N813 242 aa14.67□□□□□ -0.06
PNKP-214ENST00000600573 NRACQ8N912 160 aa14.67□□□□□ -0.06
PNKP-214ENST00000600573 MUC4Q99102 2169 aa14.67□□□□□ -0.06
PNKP-214ENST00000600573 LINC01587Q99440 93 aa14.67□□□□□ -0.06
PNKP-214ENST00000600573 WNK1Q9H4A3 2382 aa14.67□□□□□ -0.06
PNKP-214ENST00000600573 GAS8-AS1O95177 125 aa14.66□□□□□ -0.06
PNKP-214ENST00000600573 GATA1P15976 413 aaPredicted RBP14.66□□□□□ -0.06
PNKP-214ENST00000600573 PIK3CD-AS1Q5SR53 167 aa14.66□□□□□ -0.06
PNKP-214ENST00000600573 PRIMA1Q86XR5 153 aa14.66□□□□□ -0.06
PNKP-214ENST00000600573 C14orf178Q8N769 122 aaPredicted RBP14.66□□□□□ -0.06
PNKP-214ENST00000600573 PTH2Q96A98 100 aa14.66□□□□□ -0.06
PNKP-214ENST00000600573 VAMP8Q9BV40 100 aa14.66□□□□□ -0.06
PNKP-214ENST00000600573 SORL1Q92673 2214 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms