RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 ELANEP08246 267 aa12.32□□□□□ -0.44
SYDE1-204ENST00000600440 RPL39P62891 51 aaKnown RBP12.32□□□□□ -0.44
SYDE1-204ENST00000600440 SRD5A1P18405 259 aa12.31□□□□□ -0.44
SYDE1-204ENST00000600440 COL6A6A6NMZ7 2263 aa12.31□□□□□ -0.44
SYDE1-204ENST00000600440 MBD3L4A6NDZ8 208 aaPredicted RBP12.31□□□□□ -0.44
SYDE1-204ENST00000600440 MBD3L3A6NE82 208 aaPredicted RBP12.31□□□□□ -0.44
SYDE1-204ENST00000600440 MBD3L5A6NJ08 208 aaPredicted RBP12.31□□□□□ -0.44
SYDE1-204ENST00000600440 LINC01619G3V211 115 aa12.31□□□□□ -0.44
SYDE1-204ENST00000600440 CTSGP08311 255 aa12.31□□□□□ -0.44
SYDE1-204ENST00000600440 C8orf31Q8N9H6 132 aa12.31□□□□□ -0.44
SYDE1-204ENST00000600440 MBD3L2Q8NHZ7 208 aaPredicted RBP12.31□□□□□ -0.44
SYDE1-204ENST00000600440 COX6B1P14854 86 aa12.31□□□□□ -0.44
SYDE1-204ENST00000600440 TP53TG1Q9Y2A0 90 aa12.31□□□□□ -0.44
SYDE1-204ENST00000600440 PTPRZ1P23471 2315 aaPredicted RBP12.31□□□□□ -0.44
SYDE1-204ENST00000600440 IGKV3-7A0A075B6H7 116 aa12.3□□□□□ -0.44
SYDE1-204ENST00000600440 ASCL5Q7RTU5 278 aa12.3□□□□□ -0.44
SYDE1-204ENST00000600440 COX8CQ7Z4L0 72 aa12.3□□□□□ -0.44
SYDE1-204ENST00000600440 TIMD4Q96H15 378 aa12.3□□□□□ -0.44
SYDE1-204ENST00000600440 PHLDA3Q9Y5J5 127 aa12.3□□□□□ -0.44
SYDE1-204ENST00000600440 IGHV3-30P01768 117 aa12.3□□□□□ -0.44
SYDE1-204ENST00000600440 IGHV3-30-5P0DP03 117 aa12.3□□□□□ -0.44
SYDE1-204ENST00000600440 FAM110AQ9BQ89 295 aa12.3□□□□□ -0.44
SYDE1-204ENST00000600440 LGALS3P17931 250 aaKnown RBP12.29□□□□□ -0.44
SYDE1-204ENST00000600440 ECSCRQ19T08 205 aa12.29□□□□□ -0.44
SYDE1-204ENST00000600440 CHCHD5Q9BSY4 110 aa12.29□□□□□ -0.44
SYDE1-204ENST00000600440 MSRB2Q9Y3D2 182 aa12.29□□□□□ -0.44
SYDE1-204ENST00000600440 DCHS2Q6V1P9 2916 aa12.29□□□□□ -0.44
SYDE1-204ENST00000600440 IGLV11-55A0A075B6I3 123 aa12.29□□□□□ -0.44
SYDE1-204ENST00000600440 ADARB2-AS1A8MUL3 147 aa12.28□□□□□ -0.44
SYDE1-204ENST00000600440 PRR9Q5T870 116 aa12.28□□□□□ -0.44
SYDE1-204ENST00000600440 SLC50A1Q9BRV3 221 aa12.28□□□□□ -0.44
SYDE1-204ENST00000600440 BRI3O95415 125 aa12.28□□□□□ -0.44
SYDE1-204ENST00000600440 NPC2P61916 151 aa12.28□□□□□ -0.44
SYDE1-204ENST00000600440 ZNF56Q15929 161 aa12.28□□□□□ -0.44
SYDE1-204ENST00000600440 RNASE6Q93091 150 aaKnown RBP12.28□□□□□ -0.44
SYDE1-204ENST00000600440 F5H697 171 aa12.27□□□□□ -0.44
SYDE1-204ENST00000600440 PRSS2P07478 247 aa12.27□□□□□ -0.44
SYDE1-204ENST00000600440 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.27□□□□□ -0.44
SYDE1-204ENST00000600440 LY6HO94772 140 aa12.27□□□□□ -0.45
SYDE1-204ENST00000600440 CRYGDP07320 174 aa12.26□□□□□ -0.45
SYDE1-204ENST00000600440 OPRPNQ99935 248 aaPredicted RBP12.26□□□□□ -0.45
SYDE1-204ENST00000600440 CUL9Q8IWT3 2517 aa12.26□□□□□ -0.45
SYDE1-204ENST00000600440 FAM57AQ8TBR7 257 aa12.26□□□□□ -0.45
SYDE1-204ENST00000600440 ASIPP42127 132 aa12.26□□□□□ -0.45
SYDE1-204ENST00000600440 C15orf32Q32M92 178 aa12.26□□□□□ -0.45
SYDE1-204ENST00000600440 CLEC19AQ6UXS0 136 aa12.26□□□□□ -0.45
SYDE1-204ENST00000600440 SBSPONQ8IVN8 264 aa12.26□□□□□ -0.45
SYDE1-204ENST00000600440 J3QQQ9 107 aa12.25□□□□□ -0.45
SYDE1-204ENST00000600440 FOXC1Q12948 553 aa12.25□□□□□ -0.45
SYDE1-204ENST00000600440 PSMG3-AS1Q96PY0 264 aa12.25□□□□□ -0.45
SYDE1-204ENST00000600440 SRSF2Q01130 221 aaKnown RBP12.25□□□□□ -0.45
SYDE1-204ENST00000600440 LINC01620Q4KN68 170 aa12.25□□□□□ -0.45
SYDE1-204ENST00000600440 MUSTN1Q8IVN3 82 aa12.25□□□□□ -0.45
SYDE1-204ENST00000600440 C16orf92Q96LL3 132 aa12.25□□□□□ -0.45
SYDE1-204ENST00000600440 DUX3Q96PT4 197 aa12.25□□□□□ -0.45
SYDE1-204ENST00000600440 ODF3Q96PU9 254 aa12.25□□□□□ -0.45
SYDE1-204ENST00000600440 TTC28Q96AY4 2481 aa12.25□□□□□ -0.45
SYDE1-204ENST00000600440 IGLV4-69A0A075B6H9 119 aa12.24□□□□□ -0.45
SYDE1-204ENST00000600440 CD59P13987 128 aa12.24□□□□□ -0.45
SYDE1-204ENST00000600440 SLC25A29Q8N8R3 303 aa12.24□□□□□ -0.45
SYDE1-204ENST00000600440 TMEM190Q8WZ59 177 aa12.24□□□□□ -0.45
SYDE1-204ENST00000600440 IGHV3-33P01772 117 aa12.24□□□□□ -0.45
SYDE1-204ENST00000600440 ID1P41134 155 aa12.24□□□□□ -0.45
SYDE1-204ENST00000600440 C2orf82Q6UX34 121 aa12.24□□□□□ -0.45
SYDE1-204ENST00000600440 DPH3P1Q9H4G8 78 aa12.24□□□□□ -0.45
SYDE1-204ENST00000600440 ZNF256Q9Y2P7 627 aaPredicted RBP12.24□□□□□ -0.45
SYDE1-204ENST00000600440 SORL1Q92673 2214 aa12.24□□□□□ -0.45
SYDE1-204ENST00000600440 GNRH2O43555 120 aa12.24□□□□□ -0.45
SYDE1-204ENST00000600440 RPL11P62913 178 aaKnown RBP12.24□□□□□ -0.45
SYDE1-204ENST00000600440 NUP37Q8NFH4 326 aa12.24□□□□□ -0.45
SYDE1-204ENST00000600440 PPDPFQ9H3Y8 114 aa12.24□□□□□ -0.45
SYDE1-204ENST00000600440 H3BMM0 161 aa12.23□□□□□ -0.45
SYDE1-204ENST00000600440 BUB3O43684 328 aa12.23□□□□□ -0.45
SYDE1-204ENST00000600440 TSHBP01222 138 aa12.23□□□□□ -0.45
SYDE1-204ENST00000600440 ZNF672Q499Z4 452 aaPredicted RBP12.23□□□□□ -0.45
SYDE1-204ENST00000600440 UBE2WQ96B02 151 aa12.23□□□□□ -0.45
SYDE1-204ENST00000600440 JPT2Q9H910 190 aa12.23□□□□□ -0.45
SYDE1-204ENST00000600440 DPM3Q9P2X0 92 aa12.23□□□□□ -0.45
SYDE1-204ENST00000600440 A0A087WWL8 130 aa12.23□□□□□ -0.45
SYDE1-204ENST00000600440 EIF4EBP3O60516 100 aaPredicted RBP12.23□□□□□ -0.45
SYDE1-204ENST00000600440 COL27A1Q8IZC6 1860 aaPredicted RBP12.23□□□□□ -0.45
SYDE1-204ENST00000600440 ANKHD1Q8IWZ3 2542 aaKnown RBP12.23□□□□□ -0.45
SYDE1-204ENST00000600440 ATXN8Q156A1 80 aa12.22□□□□□ -0.45
SYDE1-204ENST00000600440 FAM74A4Q5TZK3 123 aa12.22□□□□□ -0.45
SYDE1-204ENST00000600440 ZNRF2Q8NHG8 242 aa12.22□□□□□ -0.45
SYDE1-204ENST00000600440 ANKRD11Q6UB99 2663 aaPredicted RBP12.22□□□□□ -0.45
SYDE1-204ENST00000600440 RNASE4P34096 147 aaKnown RBP12.22□□□□□ -0.45
SYDE1-204ENST00000600440 PMVKQ15126 192 aa12.22□□□□□ -0.45
SYDE1-204ENST00000600440 ZNF580Q9UK33 172 aa12.22□□□□□ -0.45
SYDE1-204ENST00000600440 CREBBPQ92793 2442 aa12.22□□□□□ -0.45
SYDE1-204ENST00000600440 Q6ZSV7 163 aa12.21□□□□□ -0.45
SYDE1-204ENST00000600440 OR10J6PQ8NGY7 276 aa12.21□□□□□ -0.46
SYDE1-204ENST00000600440 RIF1Q5UIP0 2472 aaKnown RBP12.21□□□□□ -0.46
SYDE1-204ENST00000600440 KAAG1Q9UBP8 84 aa12.2□□□□□ -0.46
SYDE1-204ENST00000600440 SPTAN1Q13813 2472 aaKnown RBP12.2□□□□□ -0.46
SYDE1-204ENST00000600440 F6UB75 175 aa12.2□□□□□ -0.46
SYDE1-204ENST00000600440 CLEC2BQ92478 149 aa12.19□□□□□ -0.46
SYDE1-204ENST00000600440 LINC00527Q9UJ94 153 aa12.19□□□□□ -0.46
SYDE1-204ENST00000600440 CENPVL3A0A0U1RRI6 287 aa12.19□□□□□ -0.46
SYDE1-204ENST00000600440 TRIAP1O43715 76 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms