RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 SUMO2P61956 95 aaKnown RBP7.49□□□□□ -1.21
NFKB1-212ENST00000600343 DCANP1Q8TF63 244 aa7.49□□□□□ -1.21
NFKB1-212ENST00000600343 TIMM21Q9BVV7 248 aa7.49□□□□□ -1.21
NFKB1-212ENST00000600343 PRIMA1Q86XR5 153 aa7.49□□□□□ -1.21
NFKB1-212ENST00000600343 ZNF784Q8NCA9 323 aaPredicted RBP7.49□□□□□ -1.21
NFKB1-212ENST00000600343 AHCTF1Q8WYP5 2266 aa7.49□□□□□ -1.21
NFKB1-212ENST00000600343 PRSS2P07478 247 aa7.49□□□□□ -1.21
NFKB1-212ENST00000600343 CGB3P0DN86 165 aa7.49□□□□□ -1.21
NFKB1-212ENST00000600343 CGB7P0DN87 165 aa7.49□□□□□ -1.21
NFKB1-212ENST00000600343 PCOLCEQ15113 449 aa7.49□□□□□ -1.21
NFKB1-212ENST00000600343 SPANXN1Q5VSR9 72 aa7.48□□□□□ -1.21
NFKB1-212ENST00000600343 SPEGQ15772 3267 aa7.48□□□□□ -1.21
NFKB1-212ENST00000600343 C16orf92Q96LL3 132 aa7.48□□□□□ -1.21
NFKB1-212ENST00000600343 PDE6HQ13956 83 aa7.48□□□□□ -1.21
NFKB1-212ENST00000600343 FHL2Q14192 279 aa7.48□□□□□ -1.21
NFKB1-212ENST00000600343 ABCA1O95477 2261 aa7.47□□□□□ -1.21
NFKB1-212ENST00000600343 I3L3M4 83 aa7.47□□□□□ -1.21
NFKB1-212ENST00000600343 LINC01561Q8N1V8 128 aa7.47□□□□□ -1.21
NFKB1-212ENST00000600343 BRK1Q8WUW1 75 aa7.47□□□□□ -1.21
NFKB1-212ENST00000600343 TRAV12-2A0A075B6T6 113 aa7.47□□□□□ -1.21
NFKB1-212ENST00000600343 TRAV12-3A0A0B4J271 114 aa7.47□□□□□ -1.21
NFKB1-212ENST00000600343 TMEM200BQ69YZ2 307 aa7.47□□□□□ -1.21
NFKB1-212ENST00000600343 TMEM243Q9BU79 118 aa7.47□□□□□ -1.21
NFKB1-212ENST00000600343 VPS13AQ96RL7 3174 aa7.47□□□□□ -1.21
NFKB1-212ENST00000600343 NDUFC2-KCTD14E9PQ53 114 aa7.46□□□□□ -1.21
NFKB1-212ENST00000600343 NDUFC2O95298 119 aa7.46□□□□□ -1.21
NFKB1-212ENST00000600343 PSMB8P28062 276 aa7.46□□□□□ -1.21
NFKB1-212ENST00000600343 IGHV3-64A0A075B6Q5 118 aa7.46□□□□□ -1.22
NFKB1-212ENST00000600343 WT1P19544 449 aaPredicted RBP7.46□□□□□ -1.22
NFKB1-212ENST00000600343 VMA21Q3ZAQ7 101 aa7.46□□□□□ -1.22
NFKB1-212ENST00000600343 SLC50A1Q9BRV3 221 aa7.46□□□□□ -1.22
NFKB1-212ENST00000600343 Q6ZSV7 163 aa7.46□□□□□ -1.22
NFKB1-212ENST00000600343 SERP1Q9Y6X1 66 aa7.46□□□□□ -1.22
NFKB1-212ENST00000600343 USP17L23D6RBM5 183 aa7.45□□□□□ -1.22
NFKB1-212ENST00000600343 LEPROTO15243 131 aa7.45□□□□□ -1.22
NFKB1-212ENST00000600343 ZNF833PQ6ZTB9 187 aa7.45□□□□□ -1.22
NFKB1-212ENST00000600343 RPL39LQ96EH5 51 aaKnown RBP7.45□□□□□ -1.22
NFKB1-212ENST00000600343 IGKV3D-7A0A0C4DH55 119 aa7.45□□□□□ -1.22
NFKB1-212ENST00000600343 SRRM5B3KS81 715 aa7.45□□□□□ -1.22
NFKB1-212ENST00000600343 DAZ2Q13117 558 aaKnown RBP7.45□□□□□ -1.22
NFKB1-212ENST00000600343 DAZ4Q86SG3 579 aaKnown RBP7.45□□□□□ -1.22
NFKB1-212ENST00000600343 MDS2Q8NDY4 140 aa7.45□□□□□ -1.22
NFKB1-212ENST00000600343 PSMG3-AS1Q96PY0 264 aa7.45□□□□□ -1.22
NFKB1-212ENST00000600343 SIRPDQ9H106 197 aa7.45□□□□□ -1.22
NFKB1-212ENST00000600343 DAZ1Q9NQZ3 744 aaKnown RBP7.45□□□□□ -1.22
NFKB1-212ENST00000600343 DAZ3Q9NR90 486 aaKnown RBP7.45□□□□□ -1.22
NFKB1-212ENST00000600343 TMEM178BH3BS89 294 aa7.45□□□□□ -1.22
NFKB1-212ENST00000600343 TSHBP01222 138 aa7.45□□□□□ -1.22
NFKB1-212ENST00000600343 RPL27AP46776 148 aaKnown RBP7.45□□□□□ -1.22
NFKB1-212ENST00000600343 C9orf139Q6ZV77 190 aa7.45□□□□□ -1.22
NFKB1-212ENST00000600343 FAM223AQ8IWN6 122 aa7.45□□□□□ -1.22
NFKB1-212ENST00000600343 TP53TG1Q9Y2A0 90 aa7.45□□□□□ -1.22
NFKB1-212ENST00000600343 A0A087WVE0 104 aa7.44□□□□□ -1.22
NFKB1-212ENST00000600343 AVPP01185 164 aa7.44□□□□□ -1.22
NFKB1-212ENST00000600343 IGKV1-17P01599 117 aa7.44□□□□□ -1.22
NFKB1-212ENST00000600343 CDSNQ15517 529 aa7.44□□□□□ -1.22
NFKB1-212ENST00000600343 FAM201AQ5SY85 155 aa7.44□□□□□ -1.22
NFKB1-212ENST00000600343 IGKV3D-20A0A0C4DH25 116 aa7.44□□□□□ -1.22
NFKB1-212ENST00000600343 TIRAPP58753 221 aa7.44□□□□□ -1.22
NFKB1-212ENST00000600343 IGFL4Q6B9Z1 124 aa7.44□□□□□ -1.22
NFKB1-212ENST00000600343 PVRIGQ6DKI7 326 aa7.44□□□□□ -1.22
NFKB1-212ENST00000600343 DAND5Q8N907 189 aa7.44□□□□□ -1.22
NFKB1-212ENST00000600343 SAP25Q8TEE9 199 aa7.44□□□□□ -1.22
NFKB1-212ENST00000600343 A0A1W2PRX2 142 aa7.44□□□□□ -1.22
NFKB1-212ENST00000600343 LMO7DNF2Z398 122 aa7.44□□□□□ -1.22
NFKB1-212ENST00000600343 IGLV2-23P01705 113 aa7.44□□□□□ -1.22
NFKB1-212ENST00000600343 PLCE1Q9P212 2302 aa7.43□□□□□ -1.22
NFKB1-212ENST00000600343 A0A0J9YXY3 114 aa7.43□□□□□ -1.22
NFKB1-212ENST00000600343 DSCAMO60469 2012 aa7.43□□□□□ -1.22
NFKB1-212ENST00000600343 ZNF491Q8N8L2 437 aa7.43□□□□□ -1.22
NFKB1-212ENST00000600343 SDHAF1A6NFY7 115 aa7.43□□□□□ -1.22
NFKB1-212ENST00000600343 IL17DQ8TAD2 202 aa7.43□□□□□ -1.22
NFKB1-212ENST00000600343 IMMP1LQ96LU5 166 aa7.43□□□□□ -1.22
NFKB1-212ENST00000600343 IGHV1-69DA0A0B4J2H0 117 aa7.43□□□□□ -1.22
NFKB1-212ENST00000600343 CIRBPQ14011 172 aaKnown RBP7.43□□□□□ -1.22
NFKB1-212ENST00000600343 NBEAQ8NFP9 2946 aa7.42□□□□□ -1.22
NFKB1-212ENST00000600343 IGHV7-4-1A0A0J9YVY3 117 aa7.42□□□□□ -1.22
NFKB1-212ENST00000600343 M0R1W7 72 aa7.42□□□□□ -1.22
NFKB1-212ENST00000600343 INAFM2P0DMQ5 153 aa7.42□□□□□ -1.22
NFKB1-212ENST00000600343 NBL1P41271 181 aa7.42□□□□□ -1.22
NFKB1-212ENST00000600343 DYNAPQ8N1N2 210 aa7.42□□□□□ -1.22
NFKB1-212ENST00000600343 C20orf173Q96LM9 149 aa7.42□□□□□ -1.22
NFKB1-212ENST00000600343 FAM223BA6NKX1 122 aa7.42□□□□□ -1.22
NFKB1-212ENST00000600343 DEFB104AQ8WTQ1 72 aa7.42□□□□□ -1.22
NFKB1-212ENST00000600343 C16orf95Q9H693 158 aa7.42□□□□□ -1.22
NFKB1-212ENST00000600343 MGPP08493 103 aa7.42□□□□□ -1.22
NFKB1-212ENST00000600343 NUP37Q8NFH4 326 aa7.42□□□□□ -1.22
NFKB1-212ENST00000600343 C11orf21Q9P2W6 132 aa7.42□□□□□ -1.22
NFKB1-212ENST00000600343 SMIM26A0A096LP01 95 aa7.41□□□□□ -1.22
NFKB1-212ENST00000600343 PINLYPA6NC86 204 aa7.41□□□□□ -1.22
NFKB1-212ENST00000600343 IGIPA6NJ69 53 aa7.41□□□□□ -1.22
NFKB1-212ENST00000600343 EPM2AB3EWF7 344 aa7.41□□□□□ -1.22
NFKB1-212ENST00000600343 NBR2O15453 112 aa7.41□□□□□ -1.22
NFKB1-212ENST00000600343 ZNF876PQ49A33 203 aa7.41□□□□□ -1.22
NFKB1-212ENST00000600343 TMEM141Q96I45 108 aa7.41□□□□□ -1.22
NFKB1-212ENST00000600343 NACAE9PAV3 2078 aa7.41□□□□□ -1.22
NFKB1-212ENST00000600343 TRGV5A0A0B4J1U4 118 aa7.41□□□□□ -1.22
NFKB1-212ENST00000600343 ADARB2-AS1A8MUL3 147 aa7.41□□□□□ -1.22
NFKB1-212ENST00000600343 LOXP28300 417 aaPredicted RBP7.41□□□□□ -1.22
NFKB1-212ENST00000600343 A0A0J9YX75 114 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms