RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 OR5AC2Q9NZP5 309 aa3.97□□□□□ -1.77
VRK3-220ENST00000600259 NAGKQ9UJ70 344 aa3.97□□□□□ -1.77
VRK3-220ENST00000600259 RBFOX3A6NFN3 312 aa3.96□□□□□ -1.78
VRK3-220ENST00000600259 F6UZH7 168 aa3.96□□□□□ -1.78
VRK3-220ENST00000600259 MGST1P10620 155 aaKnown RBP3.96□□□□□ -1.78
VRK3-220ENST00000600259 UBE2L3P68036 154 aaKnown RBP3.96□□□□□ -1.78
VRK3-220ENST00000600259 ZNF506Q5JVG8 444 aa3.96□□□□□ -1.78
VRK3-220ENST00000600259 GOLT1AQ6ZVE7 132 aa3.96□□□□□ -1.78
VRK3-220ENST00000600259 Q8N976 141 aa3.96□□□□□ -1.78
VRK3-220ENST00000600259 ASB13Q8WXK3 278 aa3.96□□□□□ -1.78
VRK3-220ENST00000600259 HYLS1Q96M11 299 aa3.96□□□□□ -1.78
VRK3-220ENST00000600259 SDF2L1Q9HCN8 221 aa3.96□□□□□ -1.78
VRK3-220ENST00000600259 TREM1Q9NP99 234 aa3.96□□□□□ -1.78
VRK3-220ENST00000600259 NUDT15Q9NV35 164 aa3.96□□□□□ -1.78
VRK3-220ENST00000600259 MBD2Q9UBB5 411 aa3.96□□□□□ -1.78
VRK3-220ENST00000600259 TNXBP22105 4242 aa3.96□□□□□ -1.78
VRK3-220ENST00000600259 GAGE12JA6NER3 117 aa3.95□□□□□ -1.78
VRK3-220ENST00000600259 SIX6O95475 246 aa3.95□□□□□ -1.78
VRK3-220ENST00000600259 IGLV2-11P01706 119 aa3.95□□□□□ -1.78
VRK3-220ENST00000600259 H2AFB2P0C5Z0 115 aa3.95□□□□□ -1.78
VRK3-220ENST00000600259 GNG5P63218 68 aa3.95□□□□□ -1.78
VRK3-220ENST00000600259 GAGE1Q13065 139 aa3.95□□□□□ -1.78
VRK3-220ENST00000600259 GAGE4Q13068 117 aa3.95□□□□□ -1.78
VRK3-220ENST00000600259 GAGE5Q13069 117 aa3.95□□□□□ -1.78
VRK3-220ENST00000600259 GAGE13Q4V321 117 aa3.95□□□□□ -1.78
VRK3-220ENST00000600259 FFAR4Q5NUL3 377 aa3.95□□□□□ -1.78
VRK3-220ENST00000600259 ATRAIDQ6UW56 229 aa3.95□□□□□ -1.78
VRK3-220ENST00000600259 ZFP2Q6ZN57 461 aa3.95□□□□□ -1.78
VRK3-220ENST00000600259 NIT1Q86X76 327 aa3.95□□□□□ -1.78
VRK3-220ENST00000600259 CYB561D1Q8N8Q1 229 aa3.95□□□□□ -1.78
VRK3-220ENST00000600259 TMEM75Q8N9X5 138 aa3.95□□□□□ -1.78
VRK3-220ENST00000600259 SGK494Q96LW2 274 aa3.95□□□□□ -1.78
VRK3-220ENST00000600259 SSBP4Q9BWG4 385 aaPredicted RBP3.95□□□□□ -1.78
VRK3-220ENST00000600259 SAMD10Q9BYL1 202 aa3.95□□□□□ -1.78
VRK3-220ENST00000600259 PARLQ9H300 379 aa3.95□□□□□ -1.78
VRK3-220ENST00000600259 JPT2Q9H910 190 aa3.95□□□□□ -1.78
VRK3-220ENST00000600259 COX11Q9Y6N1 276 aa3.95□□□□□ -1.78
VRK3-220ENST00000600259 IGKV3D-20A0A0C4DH25 116 aa3.94□□□□□ -1.78
VRK3-220ENST00000600259 GGTLC3B5MD39 225 aa3.94□□□□□ -1.78
VRK3-220ENST00000600259 TAAR5O14804 337 aa3.94□□□□□ -1.78
VRK3-220ENST00000600259 ACOT6Q3I5F7 207 aaPredicted RBP3.94□□□□□ -1.78
VRK3-220ENST00000600259 KHDC3LQ587J8 217 aa3.94□□□□□ -1.78
VRK3-220ENST00000600259 TOR2AQ5JU69 321 aa3.94□□□□□ -1.78
VRK3-220ENST00000600259 PIK3CD-AS1Q5SR53 167 aa3.94□□□□□ -1.78
VRK3-220ENST00000600259 C14orf178Q8N769 122 aaPredicted RBP3.94□□□□□ -1.78
VRK3-220ENST00000600259 OR2T35Q8NGX2 323 aa3.94□□□□□ -1.78
VRK3-220ENST00000600259 SUN5Q8TC36 379 aa3.94□□□□□ -1.78
VRK3-220ENST00000600259 ATP5SQ99766 215 aa3.94□□□□□ -1.78
VRK3-220ENST00000600259 NMES1Q9C002 83 aa3.94□□□□□ -1.78
VRK3-220ENST00000600259 WFDC1Q9HC57 220 aa3.94□□□□□ -1.78
VRK3-220ENST00000600259 KCNIP2Q9NS61 270 aa3.94□□□□□ -1.78
VRK3-220ENST00000600259 KLK12Q9UKR0 248 aa3.94□□□□□ -1.78
VRK3-220ENST00000600259 RNF213Q63HN8 5207 aa3.94□□□□□ -1.78
VRK3-220ENST00000600259 IGKV2D-24A0A075B6R9 120 aa3.93□□□□□ -1.78
VRK3-220ENST00000600259 A0A087WWC5 75 aa3.93□□□□□ -1.78
VRK3-220ENST00000600259 C17orf112F2Z3M2 114 aa3.93□□□□□ -1.78
VRK3-220ENST00000600259 PANO1I0J062 215 aa3.93□□□□□ -1.78
VRK3-220ENST00000600259 PTTG1O95997 202 aa3.93□□□□□ -1.78
VRK3-220ENST00000600259 GCGP01275 180 aa3.93□□□□□ -1.78
VRK3-220ENST00000600259 TAS2R45P59539 299 aa3.93□□□□□ -1.78
VRK3-220ENST00000600259 RPL37AP61513 92 aaKnown RBP3.93□□□□□ -1.78
VRK3-220ENST00000600259 ENHOQ6UWT2 76 aa3.93□□□□□ -1.78
VRK3-220ENST00000600259 PQLC2Q6ZP29 291 aa3.93□□□□□ -1.78
VRK3-220ENST00000600259 CMTM2Q8TAZ6 248 aa3.93□□□□□ -1.78
VRK3-220ENST00000600259 RPH3ALQ9UNE2 315 aa3.93□□□□□ -1.78
VRK3-220ENST00000600259 PSG8Q9UQ74 426 aa3.93□□□□□ -1.78
VRK3-220ENST00000600259 HSPB11Q9Y547 144 aa3.93□□□□□ -1.78
VRK3-220ENST00000600259 A8MWV9 139 aa3.92□□□□□ -1.78
VRK3-220ENST00000600259 UPK1BO75841 260 aa3.92□□□□□ -1.78
VRK3-220ENST00000600259 TCRAP04437 139 aa3.92□□□□□ -1.78
VRK3-220ENST00000600259 FGF8P55075 233 aaPredicted RBP3.92□□□□□ -1.78
VRK3-220ENST00000600259 H2BFSP57053 126 aa3.92□□□□□ -1.78
VRK3-220ENST00000600259 RAB2AP61019 212 aa3.92□□□□□ -1.78
VRK3-220ENST00000600259 LRRC37A5PQ49AS3 106 aa3.92□□□□□ -1.78
VRK3-220ENST00000600259 FAM74A1Q5RGS3 127 aa3.92□□□□□ -1.78
VRK3-220ENST00000600259 DNLZQ5SXM8 178 aa3.92□□□□□ -1.78
VRK3-220ENST00000600259 KRTAP26-1Q6PEX3 210 aa3.92□□□□□ -1.78
VRK3-220ENST00000600259 SDIM1Q6ZPB5 146 aa3.92□□□□□ -1.78
VRK3-220ENST00000600259 AKAP14Q86UN6 197 aa3.92□□□□□ -1.78
VRK3-220ENST00000600259 C9orf163Q8N9P6 203 aa3.92□□□□□ -1.78
VRK3-220ENST00000600259 UBE2WQ96B02 151 aa3.92□□□□□ -1.78
VRK3-220ENST00000600259 RMI2Q96E14 147 aa3.92□□□□□ -1.78
VRK3-220ENST00000600259 CHCHD7Q9BUK0 85 aa3.92□□□□□ -1.78
VRK3-220ENST00000600259 SH3BGRL3Q9H299 93 aa3.92□□□□□ -1.78
VRK3-220ENST00000600259 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.92□□□□□ -1.78
VRK3-220ENST00000600259 FAM240BA0A1B0GVZ2 78 aa3.91□□□□□ -1.78
VRK3-220ENST00000600259 SERTM2A0A1B0GWG4 89 aa3.91□□□□□ -1.78
VRK3-220ENST00000600259 HMGB3O15347 200 aaKnown RBP3.91□□□□□ -1.78
VRK3-220ENST00000600259 EIF4EBP3O60516 100 aaPredicted RBP3.91□□□□□ -1.78
VRK3-220ENST00000600259 PRSS1P07477 247 aa3.91□□□□□ -1.78
VRK3-220ENST00000600259 STAG3L2P0CL84 134 aa3.91□□□□□ -1.78
VRK3-220ENST00000600259 STAG3L3P0CL85 134 aa3.91□□□□□ -1.78
VRK3-220ENST00000600259 CRIP1P50238 77 aa3.91□□□□□ -1.78
VRK3-220ENST00000600259 SUMO1P63165 101 aaKnown RBP3.91□□□□□ -1.78
VRK3-220ENST00000600259 CYCSP99999 105 aaKnown RBP3.91□□□□□ -1.78
VRK3-220ENST00000600259 FLI1Q01543 452 aaPredicted RBP3.91□□□□□ -1.78
VRK3-220ENST00000600259 IFITM3Q01628 133 aa3.91□□□□□ -1.78
VRK3-220ENST00000600259 LGALSLQ3ZCW2 172 aaPredicted RBP3.91□□□□□ -1.78
VRK3-220ENST00000600259 SMUG1Q53HV7 270 aa3.91□□□□□ -1.78
VRK3-220ENST00000600259 Q6ZRU5 148 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms