RNA–Protein interactions for RNA: ENST00000600237.5

SYMPK-215, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 5,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-215ENST00000600237 KIF26AQ9ULI4 1882 aaPredicted RBP11.31□□□□□ -0.6
SYMPK-215ENST00000600237 PLXNB3Q9ULL4 1909 aa11.31□□□□□ -0.6
SYMPK-215ENST00000600237 DEFB112Q30KQ8 113 aa11.31□□□□□ -0.6
SYMPK-215ENST00000600237 NKAPP1Q8N9T2 125 aa11.31□□□□□ -0.6
SYMPK-215ENST00000600237 IGHV4-61A0A0C4DH41 118 aa11.3□□□□□ -0.6
SYMPK-215ENST00000600237 GATA1P15976 413 aaPredicted RBP11.3□□□□□ -0.6
SYMPK-215ENST00000600237 RPL32P62910 135 aaKnown RBP11.3□□□□□ -0.6
SYMPK-215ENST00000600237 C2orf16Q68DN1 1984 aa11.3□□□□□ -0.6
SYMPK-215ENST00000600237 DAZAP2Q15038 168 aaPredicted RBP11.3□□□□□ -0.6
SYMPK-215ENST00000600237 NCOA6Q14686 2063 aaPredicted RBP11.3□□□□□ -0.6
SYMPK-215ENST00000600237 SCRT2Q9NQ03 307 aa11.29□□□□□ -0.6
SYMPK-215ENST00000600237 FREM1Q5H8C1 2179 aa11.29□□□□□ -0.6
SYMPK-215ENST00000600237 IFITM1P13164 125 aa11.29□□□□□ -0.6
SYMPK-215ENST00000600237 CACNA1AO00555 2505 aa11.29□□□□□ -0.6
SYMPK-215ENST00000600237 IGLV1-47P01700 117 aa11.29□□□□□ -0.6
SYMPK-215ENST00000600237 IGHV4-59P01825 116 aa11.29□□□□□ -0.6
SYMPK-215ENST00000600237 NTN5Q8WTR8 489 aaPredicted RBP11.29□□□□□ -0.6
SYMPK-215ENST00000600237 KMT2EQ8IZD2 1858 aa11.29□□□□□ -0.6
SYMPK-215ENST00000600237 PRSS47A8MTI9 375 aa11.29□□□□□ -0.6
SYMPK-215ENST00000600237 IGHG4P01861 327 aa11.29□□□□□ -0.6
SYMPK-215ENST00000600237 HERV-K104P63124 156 aa11.29□□□□□ -0.6
SYMPK-215ENST00000600237 U3KQE9 123 aa11.29□□□□□ -0.6
SYMPK-215ENST00000600237 WNK1Q9H4A3 2382 aa11.28□□□□□ -0.6
SYMPK-215ENST00000600237 IGHV4-30-2A0A087WSY4 118 aa11.28□□□□□ -0.6
SYMPK-215ENST00000600237 CCL25O15444 150 aa11.28□□□□□ -0.6
SYMPK-215ENST00000600237 CRYGCP07315 174 aa11.28□□□□□ -0.6
SYMPK-215ENST00000600237 ANKRD39Q53RE8 183 aa11.28□□□□□ -0.6
SYMPK-215ENST00000600237 C11orf1Q9H5F2 150 aa11.28□□□□□ -0.6
SYMPK-215ENST00000600237 CRLF1O75462 422 aa11.28□□□□□ -0.6
SYMPK-215ENST00000600237 IGLV2-14P01704 120 aa11.28□□□□□ -0.6
SYMPK-215ENST00000600237 C16orf54Q6UWD8 224 aa11.28□□□□□ -0.6
SYMPK-215ENST00000600237 SEM1Q6ZVN7 128 aa11.28□□□□□ -0.6
SYMPK-215ENST00000600237 IGKV1OR2-108A0A075B7D4 117 aa11.28□□□□□ -0.6
SYMPK-215ENST00000600237 WI2-2373I1.2A0A1W2PRP0 233 aa11.28□□□□□ -0.6
SYMPK-215ENST00000600237 ANGP03950 147 aaKnown RBP11.27□□□□□ -0.6
SYMPK-215ENST00000600237 RNASE13Q5GAN3 156 aaKnown RBP11.27□□□□□ -0.61
SYMPK-215ENST00000600237 Q8N9W7 124 aa11.27□□□□□ -0.61
SYMPK-215ENST00000600237 GTSF1Q8WW33 167 aa11.27□□□□□ -0.61
SYMPK-215ENST00000600237 TRBV6-1A0A0K0K1D8 114 aa11.27□□□□□ -0.61
SYMPK-215ENST00000600237 HAMPP81172 84 aa11.27□□□□□ -0.61
SYMPK-215ENST00000600237 SLC25A29Q8N8R3 303 aa11.27□□□□□ -0.61
SYMPK-215ENST00000600237 TMEM126AQ9H061 195 aa11.27□□□□□ -0.61
SYMPK-215ENST00000600237 MSRB1Q9NZV6 116 aa11.27□□□□□ -0.61
SYMPK-215ENST00000600237 RBMY1FQ15415 496 aaKnown RBP11.27□□□□□ -0.61
SYMPK-215ENST00000600237 Q9H8V8 135 aa11.27□□□□□ -0.61
SYMPK-215ENST00000600237 LINC00173Q6ZV60 143 aa11.26□□□□□ -0.61
SYMPK-215ENST00000600237 C10orf105Q8TEF2 133 aa11.26□□□□□ -0.61
SYMPK-215ENST00000600237 AJUBAQ96IF1 538 aa11.26□□□□□ -0.61
SYMPK-215ENST00000600237 RITA1Q96K30 269 aa11.26□□□□□ -0.61
SYMPK-215ENST00000600237 TEX22C9J3V5 150 aa11.26□□□□□ -0.61
SYMPK-215ENST00000600237 IGLV2-23P01705 113 aa11.26□□□□□ -0.61
SYMPK-215ENST00000600237 SUMO4Q6EEV6 95 aa11.26□□□□□ -0.61
SYMPK-215ENST00000600237 ANKRD29Q8N6D5 301 aa11.26□□□□□ -0.61
SYMPK-215ENST00000600237 DSCR8Q96T75 97 aa11.26□□□□□ -0.61
SYMPK-215ENST00000600237 HIGD1BQ9P298 99 aa11.26□□□□□ -0.61
SYMPK-215ENST00000600237 NACAE9PAV3 2078 aa11.26□□□□□ -0.61
SYMPK-215ENST00000600237 TNCP24821 2201 aa11.26□□□□□ -0.61
SYMPK-215ENST00000600237 IGLL5B9A064 214 aa11.26□□□□□ -0.61
SYMPK-215ENST00000600237 Q6ZVH6 145 aa11.26□□□□□ -0.61
SYMPK-215ENST00000600237 RMI2Q96E14 147 aa11.26□□□□□ -0.61
SYMPK-215ENST00000600237 RPL39LQ96EH5 51 aaKnown RBP11.26□□□□□ -0.61
SYMPK-215ENST00000600237 FBXL19-AS1Q494R0 122 aa11.25□□□□□ -0.61
SYMPK-215ENST00000600237 CTRLP40313 264 aa11.25□□□□□ -0.61
SYMPK-215ENST00000600237 TDRG1Q3Y452 100 aa11.25□□□□□ -0.61
SYMPK-215ENST00000600237 ZFP2Q6ZN57 461 aa11.25□□□□□ -0.61
SYMPK-215ENST00000600237 ODF3L1Q8IXM7 274 aa11.25□□□□□ -0.61
SYMPK-215ENST00000600237 TRAV12-1A0A0B4J245 112 aa11.25□□□□□ -0.61
SYMPK-215ENST00000600237 C9orf47Q6ZRZ4 202 aa11.25□□□□□ -0.61
SYMPK-215ENST00000600237 Q8NA96 180 aa11.25□□□□□ -0.61
SYMPK-215ENST00000600237 NOP10Q9NPE3 64 aaKnown RBP11.25□□□□□ -0.61
SYMPK-215ENST00000600237 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.24□□□□□ -0.61
SYMPK-215ENST00000600237 IGKV2-29A2NJV5 120 aaPredicted RBP11.24□□□□□ -0.61
SYMPK-215ENST00000600237 PLA2G5P39877 138 aa11.24□□□□□ -0.61
SYMPK-215ENST00000600237 MED14OSP0DP75 135 aa11.24□□□□□ -0.61
SYMPK-215ENST00000600237 CSPG4Q6UVK1 2322 aa11.24□□□□□ -0.61
SYMPK-215ENST00000600237 P0C879 139 aa11.24□□□□□ -0.61
SYMPK-215ENST00000600237 K7EMT4 169 aa11.23□□□□□ -0.61
SYMPK-215ENST00000600237 CCL24O00175 119 aa11.23□□□□□ -0.61
SYMPK-215ENST00000600237 C15orf53Q8NAA6 179 aa11.23□□□□□ -0.61
SYMPK-215ENST00000600237 ACYP1P07311 99 aa11.23□□□□□ -0.61
SYMPK-215ENST00000600237 C5orf56Q8N8D9 126 aa11.23□□□□□ -0.61
SYMPK-215ENST00000600237 NCKAP5O14513 1909 aa11.22□□□□□ -0.61
SYMPK-215ENST00000600237 A0A0J9YXV3 536 aa11.22□□□□□ -0.61
SYMPK-215ENST00000600237 BLCAPP62952 87 aa11.22□□□□□ -0.61
SYMPK-215ENST00000600237 COL4A3Q01955 1670 aa11.22□□□□□ -0.61
SYMPK-215ENST00000600237 IGHV4-38-2P0DP08 117 aa11.22□□□□□ -0.61
SYMPK-215ENST00000600237 TRAV25A0A0B4J276 109 aa11.21□□□□□ -0.61
SYMPK-215ENST00000600237 SPRY2O43597 315 aa11.21□□□□□ -0.61
SYMPK-215ENST00000600237 MRPL36Q9P0J6 103 aaKnown RBP11.21□□□□□ -0.61
SYMPK-215ENST00000600237 TEX48A0A1B0GUV7 120 aa11.21□□□□□ -0.61
SYMPK-215ENST00000600237 BAALC-AS2P0C853 105 aa11.21□□□□□ -0.61
SYMPK-215ENST00000600237 TIMM17AQ99595 171 aa11.21□□□□□ -0.61
SYMPK-215ENST00000600237 C19orf71A6NCJ1 209 aa11.21□□□□□ -0.62
SYMPK-215ENST00000600237 XCL1P47992 114 aa11.21□□□□□ -0.62
SYMPK-215ENST00000600237 PRORYQ9H606 182 aa11.21□□□□□ -0.62
SYMPK-215ENST00000600237 SPANXCQ9NY87 97 aa11.21□□□□□ -0.62
SYMPK-215ENST00000600237 PRAC2D3DTV9 90 aa11.2□□□□□ -0.62
SYMPK-215ENST00000600237 CITED1Q99966 193 aa11.2□□□□□ -0.62
SYMPK-215ENST00000600237 DAZ2Q13117 558 aaKnown RBP11.2□□□□□ -0.62
SYMPK-215ENST00000600237 DAZ4Q86SG3 579 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms