RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 HIST1H2BJP06899 126 aa16.97■□□□□ 0.31
SYMPK-212ENST00000598896 TRGC1P0CF51 173 aa16.97■□□□□ 0.31
SYMPK-212ENST00000598896 HIST1H2BOP23527 126 aa16.97■□□□□ 0.31
SYMPK-212ENST00000598896 HIST1H2BBP33778 126 aa16.97■□□□□ 0.31
SYMPK-212ENST00000598896 HIST1H2BDP58876 126 aa16.97■□□□□ 0.31
SYMPK-212ENST00000598896 HIST1H2BCP62807 126 aa16.97■□□□□ 0.31
SYMPK-212ENST00000598896 HIST2H2BEQ16778 126 aa16.97■□□□□ 0.31
SYMPK-212ENST00000598896 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.97■□□□□ 0.31
SYMPK-212ENST00000598896 GATD1Q8NB37 220 aa16.97■□□□□ 0.31
SYMPK-212ENST00000598896 CSNK1G2-AS1Q8NCQ2 148 aa16.97■□□□□ 0.31
SYMPK-212ENST00000598896 HIST1H2BHQ93079 126 aa16.97■□□□□ 0.31
SYMPK-212ENST00000598896 HIST1H2BNQ99877 126 aa16.97■□□□□ 0.31
SYMPK-212ENST00000598896 HIST1H2BMQ99879 126 aa16.97■□□□□ 0.31
SYMPK-212ENST00000598896 IGHV4-4A0A075B6R2 117 aa16.97■□□□□ 0.31
SYMPK-212ENST00000598896 IGHV3OR16-12A0A075B7B8 117 aa16.97■□□□□ 0.31
SYMPK-212ENST00000598896 C9orf85Q96MD7 179 aa16.97■□□□□ 0.31
SYMPK-212ENST00000598896 KIAA1644Q3SXP7 199 aa16.96■□□□□ 0.31
SYMPK-212ENST00000598896 SPANXN1Q5VSR9 72 aa16.96■□□□□ 0.31
SYMPK-212ENST00000598896 LINC00467Q9BRT7 94 aa16.96■□□□□ 0.31
SYMPK-212ENST00000598896 TMEM208Q9BTX3 173 aa16.96■□□□□ 0.31
SYMPK-212ENST00000598896 PHLDA3Q9Y5J5 127 aa16.96■□□□□ 0.31
SYMPK-212ENST00000598896 TRGV11A0A075B6L2 103 aa16.95■□□□□ 0.3
SYMPK-212ENST00000598896 M0R381 172 aa16.95■□□□□ 0.3
SYMPK-212ENST00000598896 APCSP02743 223 aa16.95■□□□□ 0.3
SYMPK-212ENST00000598896 ZNF493Q6ZR52 646 aa16.95■□□□□ 0.3
SYMPK-212ENST00000598896 TMEM256Q8N2U0 113 aa16.95■□□□□ 0.3
SYMPK-212ENST00000598896 C1QTNF4Q9BXJ3 329 aa16.95■□□□□ 0.3
SYMPK-212ENST00000598896 CSTL1Q9H114 145 aa16.95■□□□□ 0.3
SYMPK-212ENST00000598896 S100A8P05109 93 aa16.95■□□□□ 0.3
SYMPK-212ENST00000598896 CACNG7P62955 275 aa16.94■□□□□ 0.3
SYMPK-212ENST00000598896 SAMD5Q5TGI4 173 aa16.93■□□□□ 0.3
SYMPK-212ENST00000598896 DMRTA1Q5VZB9 504 aa16.93■□□□□ 0.3
SYMPK-212ENST00000598896 LOC102724200A0A096LPH7 203 aaPredicted RBP16.93■□□□□ 0.3
SYMPK-212ENST00000598896 IGHV4-30-4P0DP06 118 aa16.93■□□□□ 0.3
SYMPK-212ENST00000598896 AZU1P20160 251 aa16.93■□□□□ 0.3
SYMPK-212ENST00000598896 NXPH4O95158 308 aa16.92■□□□□ 0.3
SYMPK-212ENST00000598896 AMN1Q8IY45 258 aa16.92■□□□□ 0.3
SYMPK-212ENST00000598896 C11orf72Q8NBR9 251 aa16.92■□□□□ 0.3
SYMPK-212ENST00000598896 EVI2AP22794 236 aa16.91■□□□□ 0.3
SYMPK-212ENST00000598896 TMEM191AQ9H0A3 160 aa16.91■□□□□ 0.3
SYMPK-212ENST00000598896 ZNF705AQ6ZN79 300 aaPredicted RBP16.9■□□□□ 0.3
SYMPK-212ENST00000598896 GOLT1BQ9Y3E0 138 aa16.9■□□□□ 0.3
SYMPK-212ENST00000598896 GSN-AS1Q9NRJ2 163 aa16.9■□□□□ 0.3
SYMPK-212ENST00000598896 FAM104BQ5XKR9 115 aa16.89■□□□□ 0.29
SYMPK-212ENST00000598896 DNAH3Q8TD57 4116 aa16.88■□□□□ 0.29
SYMPK-212ENST00000598896 SRIP30626 198 aa16.88■□□□□ 0.29
SYMPK-212ENST00000598896 ZNF415Q09FC8 603 aa16.88■□□□□ 0.29
SYMPK-212ENST00000598896 RNASE8Q8TDE3 154 aaKnown RBP16.88■□□□□ 0.29
SYMPK-212ENST00000598896 KIR2DL5BA0A0G2JN68 375 aa16.87■□□□□ 0.29
SYMPK-212ENST00000598896 KIR2DL5BA0A0G2JPC4 375 aa16.87■□□□□ 0.29
SYMPK-212ENST00000598896 KIR2DL5AQ8N109 375 aa16.87■□□□□ 0.29
SYMPK-212ENST00000598896 KIR2DL5BQ8NHK3 375 aa16.87■□□□□ 0.29
SYMPK-212ENST00000598896 RNF185Q96GF1 192 aa16.87■□□□□ 0.29
SYMPK-212ENST00000598896 ZMAT5Q9UDW3 170 aaKnown RBP16.86■□□□□ 0.29
SYMPK-212ENST00000598896 JPT2Q9H910 190 aa16.86■□□□□ 0.29
SYMPK-212ENST00000598896 APOC4P55056 127 aa16.85■□□□□ 0.29
SYMPK-212ENST00000598896 MRPL51Q4U2R6 128 aaKnown RBP16.85■□□□□ 0.29
SYMPK-212ENST00000598896 C14orf178Q8N769 122 aaPredicted RBP16.85■□□□□ 0.29
SYMPK-212ENST00000598896 RCHY1Q96PM5 261 aa16.85■□□□□ 0.29
SYMPK-212ENST00000598896 ALKBH7Q9BT30 221 aaPredicted RBP16.85■□□□□ 0.29
SYMPK-212ENST00000598896 RAB4AP20338 218 aa16.84■□□□□ 0.29
SYMPK-212ENST00000598896 NDUFA6P56556 154 aa16.84■□□□□ 0.29
SYMPK-212ENST00000598896 ZNF876PQ49A33 203 aa16.84■□□□□ 0.29
SYMPK-212ENST00000598896 IL17DQ8TAD2 202 aa16.84■□□□□ 0.29
SYMPK-212ENST00000598896 TMEM263Q8WUH6 116 aaKnown RBP16.84■□□□□ 0.29
SYMPK-212ENST00000598896 RIPPLY3P57055 190 aa16.84■□□□□ 0.29
SYMPK-212ENST00000598896 AP1S3Q96PC3 154 aa16.84■□□□□ 0.29
SYMPK-212ENST00000598896 NOTCH1P46531 2555 aa16.83■□□□□ 0.29
SYMPK-212ENST00000598896 SMIM15Q7Z3B0 74 aa16.83■□□□□ 0.28
SYMPK-212ENST00000598896 SYT8Q8NBV8 401 aa16.83■□□□□ 0.28
SYMPK-212ENST00000598896 PLAC8L1A1L4L8 177 aa16.82■□□□□ 0.28
SYMPK-212ENST00000598896 S100A6P06703 90 aa16.82■□□□□ 0.28
SYMPK-212ENST00000598896 DEFB135Q30KP9 77 aa16.82■□□□□ 0.28
SYMPK-212ENST00000598896 KIF25-AS1Q9Y6Z4 181 aa16.82■□□□□ 0.28
SYMPK-212ENST00000598896 D6R8Y8 96 aa16.82■□□□□ 0.28
SYMPK-212ENST00000598896 M0R2P5 195 aa16.82■□□□□ 0.28
SYMPK-212ENST00000598896 GAS8-AS1O95177 125 aa16.82■□□□□ 0.28
SYMPK-212ENST00000598896 SNRPEP62304 92 aaKnown RBP16.82■□□□□ 0.28
SYMPK-212ENST00000598896 DPH3P1Q9H4G8 78 aa16.81■□□□□ 0.28
SYMPK-212ENST00000598896 A8MZ25 164 aa16.8■□□□□ 0.28
SYMPK-212ENST00000598896 SMKR1H3BMG3 65 aa16.8■□□□□ 0.28
SYMPK-212ENST00000598896 NCR2O95944 276 aa16.8■□□□□ 0.28
SYMPK-212ENST00000598896 RRN3P1Q2M238 152 aa16.8■□□□□ 0.28
SYMPK-212ENST00000598896 C18orf32Q8TCD1 76 aa16.8■□□□□ 0.28
SYMPK-212ENST00000598896 C16orf74Q96GX8 76 aa16.8■□□□□ 0.28
SYMPK-212ENST00000598896 SAMD10Q9BYL1 202 aa16.8■□□□□ 0.28
SYMPK-212ENST00000598896 X6R8D5 127 aa16.8■□□□□ 0.28
SYMPK-212ENST00000598896 NBEAL2Q6ZNJ1 2754 aa16.8■□□□□ 0.28
SYMPK-212ENST00000598896 NBEAL1Q6ZS30 2694 aa16.8■□□□□ 0.28
SYMPK-212ENST00000598896 A0A087WWL8 130 aa16.8■□□□□ 0.28
SYMPK-212ENST00000598896 C5orf52A6NGY3 159 aa16.8■□□□□ 0.28
SYMPK-212ENST00000598896 SPXQ9BT56 116 aa16.8■□□□□ 0.28
SYMPK-212ENST00000598896 MRPL16Q9NX20 251 aaKnown RBP16.8■□□□□ 0.28
SYMPK-212ENST00000598896 U3KQK5 164 aa16.8■□□□□ 0.28
SYMPK-212ENST00000598896 MGAM2Q2M2H8 2515 aa16.79■□□□□ 0.28
SYMPK-212ENST00000598896 LINC00315P59091 139 aa16.79■□□□□ 0.28
SYMPK-212ENST00000598896 TRAV26-2A0A0B4J265 109 aa16.78■□□□□ 0.28
SYMPK-212ENST00000598896 IQCJQ1A5X6 159 aa16.78■□□□□ 0.28
SYMPK-212ENST00000598896 PRB2P02812 416 aaPredicted RBP16.78■□□□□ 0.28
SYMPK-212ENST00000598896 Q0VG73 95 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 163.4 ms