RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 TRGV11A0A075B6L2 103 aa10.45□□□□□ -0.74
TGFB1-202ENST00000597453 TRGV2A0A075B6R0 118 aa10.45□□□□□ -0.74
TGFB1-202ENST00000597453 A0A096LPF7 62 aa10.45□□□□□ -0.74
TGFB1-202ENST00000597453 TRGV1A0A0A0MS02 117 aa10.45□□□□□ -0.74
TGFB1-202ENST00000597453 SRSF3P84103 164 aaKnown RBP10.45□□□□□ -0.74
TGFB1-202ENST00000597453 FAM74A3Q4VXF1 159 aa10.45□□□□□ -0.74
TGFB1-202ENST00000597453 SMUG1Q53HV7 270 aa10.45□□□□□ -0.74
TGFB1-202ENST00000597453 TTC32Q5I0X7 151 aa10.45□□□□□ -0.74
TGFB1-202ENST00000597453 FMC1Q96HJ9 113 aa10.45□□□□□ -0.74
TGFB1-202ENST00000597453 C18orf15Q96N68 181 aa10.45□□□□□ -0.74
TGFB1-202ENST00000597453 MANBALQ9NQG1 85 aa10.45□□□□□ -0.74
TGFB1-202ENST00000597453 NAGKQ9UJ70 344 aa10.45□□□□□ -0.74
TGFB1-202ENST00000597453 MRPS16Q9Y3D3 137 aaKnown RBP10.45□□□□□ -0.74
TGFB1-202ENST00000597453 SPINK4O60575 86 aa10.44□□□□□ -0.74
TGFB1-202ENST00000597453 GCGP01275 180 aa10.44□□□□□ -0.74
TGFB1-202ENST00000597453 PFN1P07737 140 aaKnown RBP10.44□□□□□ -0.74
TGFB1-202ENST00000597453 SFTA3P0C7M3 94 aa10.44□□□□□ -0.74
TGFB1-202ENST00000597453 ZNF80P51504 273 aaPredicted RBP10.44□□□□□ -0.74
TGFB1-202ENST00000597453 KCNS1Q96KK3 526 aa10.44□□□□□ -0.74
TGFB1-202ENST00000597453 TRBV6-1A0A0K0K1D8 114 aa10.43□□□□□ -0.74
TGFB1-202ENST00000597453 AKR1C3P42330 323 aa10.43□□□□□ -0.74
TGFB1-202ENST00000597453 UBE2G1P62253 170 aa10.43□□□□□ -0.74
TGFB1-202ENST00000597453 TMEM183BQ1AE95 376 aa10.43□□□□□ -0.74
TGFB1-202ENST00000597453 COX8CQ7Z4L0 72 aa10.43□□□□□ -0.74
TGFB1-202ENST00000597453 SPATA12Q7Z6I5 190 aa10.43□□□□□ -0.74
TGFB1-202ENST00000597453 TMEM183AQ8IXX5 376 aa10.43□□□□□ -0.74
TGFB1-202ENST00000597453 SDF2L1Q9HCN8 221 aa10.43□□□□□ -0.74
TGFB1-202ENST00000597453 MDFICQ9P1T7 246 aa10.43□□□□□ -0.74
TGFB1-202ENST00000597453 GNG13Q9P2W3 67 aa10.43□□□□□ -0.74
TGFB1-202ENST00000597453 ZFP30Q9Y2G7 519 aa10.43□□□□□ -0.74
TGFB1-202ENST00000597453 A0A1W2PPQ1 181 aa10.42□□□□□ -0.74
TGFB1-202ENST00000597453 CDK2AP2O75956 126 aa10.42□□□□□ -0.74
TGFB1-202ENST00000597453 TYMSP04818 313 aa10.42□□□□□ -0.74
TGFB1-202ENST00000597453 CCL20P78556 96 aa10.42□□□□□ -0.74
TGFB1-202ENST00000597453 MRPL16Q9NX20 251 aaKnown RBP10.42□□□□□ -0.74
TGFB1-202ENST00000597453 IGHV3-16A0A0C4DH30 117 aa10.41□□□□□ -0.74
TGFB1-202ENST00000597453 SCO2A0A1W2PP80 73 aa10.41□□□□□ -0.74
TGFB1-202ENST00000597453 LTAP01374 205 aa10.41□□□□□ -0.74
TGFB1-202ENST00000597453 IGHV3-53P01767 116 aa10.41□□□□□ -0.74
TGFB1-202ENST00000597453 TXNDC17Q9BRA2 123 aa10.41□□□□□ -0.74
TGFB1-202ENST00000597453 SPXQ9BT56 116 aa10.41□□□□□ -0.74
TGFB1-202ENST00000597453 SMCO4Q9NRQ5 59 aa10.41□□□□□ -0.74
TGFB1-202ENST00000597453 C11orf21Q9P2W6 132 aa10.41□□□□□ -0.74
TGFB1-202ENST00000597453 GNRH2O43555 120 aa10.4□□□□□ -0.74
TGFB1-202ENST00000597453 S100A9P06702 114 aaKnown RBP10.4□□□□□ -0.74
TGFB1-202ENST00000597453 KRTAP10-2P60368 255 aa10.4□□□□□ -0.74
TGFB1-202ENST00000597453 C15orf54Q8N8G6 183 aa10.4□□□□□ -0.74
TGFB1-202ENST00000597453 ZC2HC1AQ96GY0 325 aa10.4□□□□□ -0.74
TGFB1-202ENST00000597453 FABP5P3A8MUU1 101 aa10.39□□□□□ -0.75
TGFB1-202ENST00000597453 NDUFS6O75380 124 aaKnown RBP10.39□□□□□ -0.75
TGFB1-202ENST00000597453 IFNA1P01562 189 aa10.39□□□□□ -0.75
TGFB1-202ENST00000597453 RHEBQ15382 184 aa10.39□□□□□ -0.75
TGFB1-202ENST00000597453 MAPKAPK5-AS1Q8N8E1 139 aa10.39□□□□□ -0.75
TGFB1-202ENST00000597453 C11orf52Q96A22 123 aa10.39□□□□□ -0.75
TGFB1-202ENST00000597453 C9JQL5 133 aa10.38□□□□□ -0.75
TGFB1-202ENST00000597453 PAX4O43316 350 aa10.38□□□□□ -0.75
TGFB1-202ENST00000597453 BTF3P20290 206 aaKnown RBP10.38□□□□□ -0.75
TGFB1-202ENST00000597453 LINC00315P59091 139 aa10.38□□□□□ -0.75
TGFB1-202ENST00000597453 RASL10AQ92737 203 aa10.38□□□□□ -0.75
TGFB1-202ENST00000597453 ICOSQ9Y6W8 199 aa10.38□□□□□ -0.75
TGFB1-202ENST00000597453 M0R2P5 195 aa10.37□□□□□ -0.75
TGFB1-202ENST00000597453 BCL2P10415 239 aa10.37□□□□□ -0.75
TGFB1-202ENST00000597453 TAGLN2P37802 199 aaKnown RBP10.37□□□□□ -0.75
TGFB1-202ENST00000597453 CRYBA4P53673 196 aa10.37□□□□□ -0.75
TGFB1-202ENST00000597453 MEF2BQ02080 365 aaPredicted RBP10.37□□□□□ -0.75
TGFB1-202ENST00000597453 FHL2Q14192 279 aa10.37□□□□□ -0.75
TGFB1-202ENST00000597453 ZNF506Q5JVG8 444 aa10.37□□□□□ -0.75
TGFB1-202ENST00000597453 FAM162BQ5T6X4 162 aa10.37□□□□□ -0.75
TGFB1-202ENST00000597453 Q6ZRN7 208 aaPredicted RBP10.37□□□□□ -0.75
TGFB1-202ENST00000597453 IGKV3D-20A0A0C4DH25 116 aa10.36□□□□□ -0.75
TGFB1-202ENST00000597453 SIVA1O15304 175 aa10.36□□□□□ -0.75
TGFB1-202ENST00000597453 PDE6DO43924 150 aa10.36□□□□□ -0.75
TGFB1-202ENST00000597453 SH2D1AO60880 128 aa10.36□□□□□ -0.75
TGFB1-202ENST00000597453 NXPH4O95158 308 aa10.36□□□□□ -0.75
TGFB1-202ENST00000597453 CRIP1P50238 77 aa10.36□□□□□ -0.75
TGFB1-202ENST00000597453 ZNF674Q2M3X9 581 aa10.36□□□□□ -0.75
TGFB1-202ENST00000597453 CBLN2Q8IUK8 224 aa10.36□□□□□ -0.75
TGFB1-202ENST00000597453 C9orf85Q96MD7 179 aa10.36□□□□□ -0.75
TGFB1-202ENST00000597453 EIF5A2Q9GZV4 153 aaKnown RBP10.36□□□□□ -0.75
TGFB1-202ENST00000597453 PRO0255Q9UI72 69 aa10.36□□□□□ -0.75
TGFB1-202ENST00000597453 RBFOX3A6NFN3 312 aa10.35□□□□□ -0.75
TGFB1-202ENST00000597453 COLCA2A8K830 154 aa10.35□□□□□ -0.75
TGFB1-202ENST00000597453 RNASE3P12724 160 aaKnown RBP10.35□□□□□ -0.75
TGFB1-202ENST00000597453 RPL35P42766 123 aaKnown RBP10.35□□□□□ -0.75
TGFB1-202ENST00000597453 BAGE2Q86Y30 109 aa10.35□□□□□ -0.75
TGFB1-202ENST00000597453 MLST8Q9BVC4 326 aa10.35□□□□□ -0.75
TGFB1-202ENST00000597453 VAX2Q9UIW0 290 aa10.35□□□□□ -0.75
TGFB1-202ENST00000597453 HHLA3Q9XRX5 114 aa10.35□□□□□ -0.75
TGFB1-202ENST00000597453 ORM1P02763 201 aa10.34□□□□□ -0.75
TGFB1-202ENST00000597453 MT-ND4LP03901 98 aa10.34□□□□□ -0.75
TGFB1-202ENST00000597453 ASIPP42127 132 aa10.34□□□□□ -0.75
TGFB1-202ENST00000597453 LYPD5Q6UWN5 251 aa10.34□□□□□ -0.75
TGFB1-202ENST00000597453 NHLRC2Q8NBF2 726 aa10.34□□□□□ -0.75
TGFB1-202ENST00000597453 PTH2Q96A98 100 aa10.34□□□□□ -0.75
TGFB1-202ENST00000597453 ZNF479Q96JC4 524 aa10.34□□□□□ -0.75
TGFB1-202ENST00000597453 DERL1Q9BUN8 251 aa10.34□□□□□ -0.75
TGFB1-202ENST00000597453 BIN3Q9NQY0 253 aa10.34□□□□□ -0.75
TGFB1-202ENST00000597453 TNFRSF18Q9Y5U5 241 aa10.34□□□□□ -0.75
TGFB1-202ENST00000597453 TRAV4A0A0B4J268 109 aa10.33□□□□□ -0.76
TGFB1-202ENST00000597453 C7orf77A4D0Y5 90 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms