RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 MED14OSP0DP75 135 aa5.9□□□□□ -1.46
VRK3-211ENST00000596445 HTN3P15516 51 aa5.9□□□□□ -1.46
VRK3-211ENST00000596445 RPS20P60866 119 aaKnown RBP5.9□□□□□ -1.46
VRK3-211ENST00000596445 ZNF876PQ49A33 203 aa5.9□□□□□ -1.46
VRK3-211ENST00000596445 PIK3CD-AS1Q5SR53 167 aa5.9□□□□□ -1.46
VRK3-211ENST00000596445 FAM231DQ6ZW35 169 aa5.9□□□□□ -1.46
VRK3-211ENST00000596445 LINC01551Q86U37 167 aa5.9□□□□□ -1.46
VRK3-211ENST00000596445 NUDT10Q8NFP7 164 aa5.9□□□□□ -1.46
VRK3-211ENST00000596445 OR2D3Q8NGH3 330 aa5.9□□□□□ -1.46
VRK3-211ENST00000596445 NUDT11Q96G61 164 aa5.9□□□□□ -1.46
VRK3-211ENST00000596445 FAM210BQ96KR6 192 aa5.9□□□□□ -1.46
VRK3-211ENST00000596445 NDUFAF3Q9BU61 184 aa5.9□□□□□ -1.46
VRK3-211ENST00000596445 RNASE7Q9H1E1 156 aaKnown RBP5.9□□□□□ -1.46
VRK3-211ENST00000596445 SCRT2Q9NQ03 307 aa5.9□□□□□ -1.46
VRK3-211ENST00000596445 IGLL5B9A064 214 aa5.89□□□□□ -1.47
VRK3-211ENST00000596445 F5H768 121 aa5.89□□□□□ -1.47
VRK3-211ENST00000596445 SFTA3P0C7M3 94 aa5.89□□□□□ -1.47
VRK3-211ENST00000596445 TCTAP57738 103 aa5.89□□□□□ -1.47
VRK3-211ENST00000596445 UQCC3Q6UW78 93 aa5.89□□□□□ -1.47
VRK3-211ENST00000596445 SSBP4Q9BWG4 385 aaPredicted RBP5.89□□□□□ -1.47
VRK3-211ENST00000596445 RPP21Q9H633 154 aaKnown RBP5.89□□□□□ -1.47
VRK3-211ENST00000596445 NAT8Q9UHE5 227 aa5.89□□□□□ -1.47
VRK3-211ENST00000596445 PHLDA3Q9Y5J5 127 aa5.89□□□□□ -1.47
VRK3-211ENST00000596445 PLECQ15149 4684 aaKnown RBP5.89□□□□□ -1.47
VRK3-211ENST00000596445 IGHV4-4A0A075B6R2 117 aa5.88□□□□□ -1.47
VRK3-211ENST00000596445 TRAV4A0A0B4J268 109 aa5.88□□□□□ -1.47
VRK3-211ENST00000596445 LINC00862A6NCI5 91 aa5.88□□□□□ -1.47
VRK3-211ENST00000596445 SNAI2O43623 268 aa5.88□□□□□ -1.47
VRK3-211ENST00000596445 GATCO43716 136 aaKnown RBP5.88□□□□□ -1.47
VRK3-211ENST00000596445 OR5AL1P0C617 328 aa5.88□□□□□ -1.47
VRK3-211ENST00000596445 IGLC6P0CF74 106 aa5.88□□□□□ -1.47
VRK3-211ENST00000596445 GZMBP10144 247 aa5.88□□□□□ -1.47
VRK3-211ENST00000596445 HOXA5P20719 270 aa5.88□□□□□ -1.47
VRK3-211ENST00000596445 ERVFC1-1P60608 527 aa5.88□□□□□ -1.47
VRK3-211ENST00000596445 RPL23P62829 140 aaKnown RBP5.88□□□□□ -1.47
VRK3-211ENST00000596445 ADIRFQ15847 76 aa5.88□□□□□ -1.47
VRK3-211ENST00000596445 DMRTA1Q5VZB9 504 aa5.88□□□□□ -1.47
VRK3-211ENST00000596445 POM121L12Q8N7R1 296 aa5.88□□□□□ -1.47
VRK3-211ENST00000596445 SYT8Q8NBV8 401 aa5.88□□□□□ -1.47
VRK3-211ENST00000596445 OR4C5Q8NGB2 326 aa5.88□□□□□ -1.47
VRK3-211ENST00000596445 ISOC2Q96AB3 205 aa5.88□□□□□ -1.47
VRK3-211ENST00000596445 OSTCQ9NRP0 149 aa5.88□□□□□ -1.47
VRK3-211ENST00000596445 A0A1W2PPQ1 181 aa5.87□□□□□ -1.47
VRK3-211ENST00000596445 A8MWL6 223 aa5.87□□□□□ -1.47
VRK3-211ENST00000596445 A8MWV9 139 aa5.87□□□□□ -1.47
VRK3-211ENST00000596445 F2Z2F3 143 aa5.87□□□□□ -1.47
VRK3-211ENST00000596445 RS1O15537 224 aa5.87□□□□□ -1.47
VRK3-211ENST00000596445 CIDEAO60543 219 aa5.87□□□□□ -1.47
VRK3-211ENST00000596445 NXPH4O95158 308 aa5.87□□□□□ -1.47
VRK3-211ENST00000596445 IGHV3-53P01767 116 aa5.87□□□□□ -1.47
VRK3-211ENST00000596445 SLAQ13239 276 aa5.87□□□□□ -1.47
VRK3-211ENST00000596445 FHL2Q14192 279 aa5.87□□□□□ -1.47
VRK3-211ENST00000596445 CT83Q5H943 113 aa5.87□□□□□ -1.47
VRK3-211ENST00000596445 CFAP126Q5VTH2 177 aa5.87□□□□□ -1.47
VRK3-211ENST00000596445 TMEM88Q6PEY1 159 aa5.87□□□□□ -1.47
VRK3-211ENST00000596445 COMMD7Q86VX2 200 aa5.87□□□□□ -1.47
VRK3-211ENST00000596445 ZFP82Q8N141 532 aa5.87□□□□□ -1.47
VRK3-211ENST00000596445 C15orf54Q8N8G6 183 aa5.87□□□□□ -1.47
VRK3-211ENST00000596445 FER1L6-AS1Q8NA97 138 aa5.87□□□□□ -1.47
VRK3-211ENST00000596445 OR10AG1Q8NH19 301 aa5.87□□□□□ -1.47
VRK3-211ENST00000596445 SFRP2Q96HF1 295 aa5.87□□□□□ -1.47
VRK3-211ENST00000596445 ZNF479Q96JC4 524 aa5.87□□□□□ -1.47
VRK3-211ENST00000596445 TRAV26-1A0A087WT03 109 aa5.86□□□□□ -1.47
VRK3-211ENST00000596445 TRGV4A0A0C4DH28 118 aa5.86□□□□□ -1.47
VRK3-211ENST00000596445 H3BNG1 76 aa5.86□□□□□ -1.47
VRK3-211ENST00000596445 M0R381 172 aa5.86□□□□□ -1.47
VRK3-211ENST00000596445 SPANXN1Q5VSR9 72 aa5.86□□□□□ -1.47
VRK3-211ENST00000596445 ZFP2Q6ZN57 461 aa5.86□□□□□ -1.47
VRK3-211ENST00000596445 C15orf53Q8NAA6 179 aa5.86□□□□□ -1.47
VRK3-211ENST00000596445 TPPP3Q9BW30 176 aa5.86□□□□□ -1.47
VRK3-211ENST00000596445 PRO0255Q9UI72 69 aa5.86□□□□□ -1.47
VRK3-211ENST00000596445 APLNQ9ULZ1 77 aa5.86□□□□□ -1.47
VRK3-211ENST00000596445 HHLA3Q9XRX5 114 aa5.86□□□□□ -1.47
VRK3-211ENST00000596445 MUC21A0A0G2JKD1 596 aa5.85□□□□□ -1.47
VRK3-211ENST00000596445 MUC21A0A140T8X8 626 aa5.85□□□□□ -1.47
VRK3-211ENST00000596445 TMEM218A2RU14 115 aa5.85□□□□□ -1.47
VRK3-211ENST00000596445 CTRLP40313 264 aa5.85□□□□□ -1.47
VRK3-211ENST00000596445 CRYBA4P53673 196 aa5.85□□□□□ -1.47
VRK3-211ENST00000596445 CACNG7P62955 275 aa5.85□□□□□ -1.47
VRK3-211ENST00000596445 PNRC1Q12796 327 aaPredicted RBP5.85□□□□□ -1.47
VRK3-211ENST00000596445 WDR73Q6P4I2 378 aa5.85□□□□□ -1.47
VRK3-211ENST00000596445 LYZL1Q6UWQ5 148 aa5.85□□□□□ -1.47
VRK3-211ENST00000596445 OR10G8Q8NGN5 311 aa5.85□□□□□ -1.47
VRK3-211ENST00000596445 GTSF1Q8WW33 167 aa5.85□□□□□ -1.47
VRK3-211ENST00000596445 VSIG2Q96IQ7 327 aa5.85□□□□□ -1.47
VRK3-211ENST00000596445 GFRA4Q9GZZ7 299 aa5.85□□□□□ -1.47
VRK3-211ENST00000596445 JPT2Q9H910 190 aa5.85□□□□□ -1.47
VRK3-211ENST00000596445 V9GYV3 84 aa5.85□□□□□ -1.47
VRK3-211ENST00000596445 IGHV3-73A0A0B4J1V6 119 aa5.84□□□□□ -1.47
VRK3-211ENST00000596445 A0A0J9YY99 117 aa5.84□□□□□ -1.47
VRK3-211ENST00000596445 FAM231BA6NCW3 169 aa5.84□□□□□ -1.47
VRK3-211ENST00000596445 F8W036 122 aa5.84□□□□□ -1.47
VRK3-211ENST00000596445 RHODO00212 210 aa5.84□□□□□ -1.47
VRK3-211ENST00000596445 PAX4O43316 350 aa5.84□□□□□ -1.47
VRK3-211ENST00000596445 GATA1P15976 413 aaPredicted RBP5.84□□□□□ -1.47
VRK3-211ENST00000596445 FOXA3P55318 350 aaPredicted RBP5.84□□□□□ -1.47
VRK3-211ENST00000596445 UFSP1Q6NVU6 142 aa5.84□□□□□ -1.47
VRK3-211ENST00000596445 TSKUQ8WUA8 353 aa5.84□□□□□ -1.47
VRK3-211ENST00000596445 SEC11CQ9BY50 192 aa5.84□□□□□ -1.47
VRK3-211ENST00000596445 CNFNQ9BYD5 112 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms