RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 TEX48A0A1B0GUV7 120 aa7.42□□□□□ -1.22
LIG1-210ENST00000596332 CXCL1P09341 107 aa7.42□□□□□ -1.22
LIG1-210ENST00000596332 ARMS2P0C7Q2 107 aa7.42□□□□□ -1.22
LIG1-210ENST00000596332 IGLC6P0CF74 106 aa7.42□□□□□ -1.22
LIG1-210ENST00000596332 GZMBP10144 247 aa7.42□□□□□ -1.22
LIG1-210ENST00000596332 MGST1P10620 155 aaKnown RBP7.42□□□□□ -1.22
LIG1-210ENST00000596332 CEBPGP53567 150 aa7.42□□□□□ -1.22
LIG1-210ENST00000596332 DAD1P61803 113 aa7.42□□□□□ -1.22
LIG1-210ENST00000596332 RPL23P62829 140 aaKnown RBP7.42□□□□□ -1.22
LIG1-210ENST00000596332 UFSP1Q6NVU6 142 aa7.42□□□□□ -1.22
LIG1-210ENST00000596332 SMIM7Q9BQ49 75 aa7.42□□□□□ -1.22
LIG1-210ENST00000596332 JPT2Q9H910 190 aa7.42□□□□□ -1.22
LIG1-210ENST00000596332 IL36BQ9NZH7 164 aa7.42□□□□□ -1.22
LIG1-210ENST00000596332 APLNQ9ULZ1 77 aa7.42□□□□□ -1.22
LIG1-210ENST00000596332 DEFB131BA0A096LNP1 70 aa7.41□□□□□ -1.22
LIG1-210ENST00000596332 TRGV1A0A0A0MS02 117 aa7.41□□□□□ -1.22
LIG1-210ENST00000596332 TRAV10A0A0B4J240 114 aa7.41□□□□□ -1.22
LIG1-210ENST00000596332 TMEM218A2RU14 115 aa7.41□□□□□ -1.22
LIG1-210ENST00000596332 ZNF727A8MUV8 499 aa7.41□□□□□ -1.22
LIG1-210ENST00000596332 M0R2P5 195 aa7.41□□□□□ -1.22
LIG1-210ENST00000596332 SNAI2O43623 268 aa7.41□□□□□ -1.22
LIG1-210ENST00000596332 ADCYAP1P18509 176 aa7.41□□□□□ -1.22
LIG1-210ENST00000596332 FHL2Q14192 279 aa7.41□□□□□ -1.22
LIG1-210ENST00000596332 FAM231DQ6ZW35 169 aa7.41□□□□□ -1.22
LIG1-210ENST00000596332 CLRN3Q8NCR9 226 aa7.41□□□□□ -1.22
LIG1-210ENST00000596332 ZNF479Q96JC4 524 aa7.41□□□□□ -1.22
LIG1-210ENST00000596332 LYSTQ99698 3801 aa7.4□□□□□ -1.22
LIG1-210ENST00000596332 H3BVH4 76 aa7.4□□□□□ -1.22
LIG1-210ENST00000596332 RS1O15537 224 aa7.4□□□□□ -1.22
LIG1-210ENST00000596332 NXPH4O95158 308 aa7.4□□□□□ -1.22
LIG1-210ENST00000596332 SNAPINO95295 136 aa7.4□□□□□ -1.22
LIG1-210ENST00000596332 ASIPP42127 132 aa7.4□□□□□ -1.22
LIG1-210ENST00000596332 TMEM241Q24JQ0 296 aa7.4□□□□□ -1.22
LIG1-210ENST00000596332 FAM74A3Q4VXF1 159 aa7.4□□□□□ -1.22
LIG1-210ENST00000596332 GTSF1Q8WW33 167 aa7.4□□□□□ -1.22
LIG1-210ENST00000596332 ISOC2Q96AB3 205 aa7.4□□□□□ -1.22
LIG1-210ENST00000596332 VSIG2Q96IQ7 327 aa7.4□□□□□ -1.22
LIG1-210ENST00000596332 CARHSP1Q9Y2V2 147 aaKnown RBP7.4□□□□□ -1.22
LIG1-210ENST00000596332 ATP5G1P05496 136 aa7.39□□□□□ -1.23
LIG1-210ENST00000596332 OR5AL1P0C617 328 aa7.39□□□□□ -1.23
LIG1-210ENST00000596332 SFTA3P0C7M3 94 aa7.39□□□□□ -1.23
LIG1-210ENST00000596332 MED14OSP0DP75 135 aa7.39□□□□□ -1.23
LIG1-210ENST00000596332 SOHLH1Q5JUK2 328 aa7.39□□□□□ -1.23
LIG1-210ENST00000596332 PIK3CD-AS1Q5SR53 167 aa7.39□□□□□ -1.23
LIG1-210ENST00000596332 C10orf91Q5T1B1 145 aa7.39□□□□□ -1.23
LIG1-210ENST00000596332 CFAP126Q5VTH2 177 aa7.39□□□□□ -1.23
LIG1-210ENST00000596332 Q6ZSN1 163 aa7.39□□□□□ -1.23
LIG1-210ENST00000596332 OR2D3Q8NGH3 330 aa7.39□□□□□ -1.23
LIG1-210ENST00000596332 OR10AG1Q8NH19 301 aa7.39□□□□□ -1.23
LIG1-210ENST00000596332 SEC11CQ9BY50 192 aa7.39□□□□□ -1.23
LIG1-210ENST00000596332 SAMD10Q9BYL1 202 aa7.39□□□□□ -1.23
LIG1-210ENST00000596332 V9GYV3 84 aa7.39□□□□□ -1.23
LIG1-210ENST00000596332 DNAH1Q9P2D7 4330 aa7.39□□□□□ -1.23
LIG1-210ENST00000596332 VPS13DQ5THJ4 4388 aa7.38□□□□□ -1.23
LIG1-210ENST00000596332 MUC21A0A0G2JKD1 596 aa7.38□□□□□ -1.23
LIG1-210ENST00000596332 MUC21A0A140T8X8 626 aa7.38□□□□□ -1.23
LIG1-210ENST00000596332 NUPR2A6NF83 97 aa7.38□□□□□ -1.23
LIG1-210ENST00000596332 CRYGDP07320 174 aa7.38□□□□□ -1.23
LIG1-210ENST00000596332 FOXA3P55318 350 aaPredicted RBP7.38□□□□□ -1.23
LIG1-210ENST00000596332 LINC00315P59091 139 aa7.38□□□□□ -1.23
LIG1-210ENST00000596332 ZNF876PQ49A33 203 aa7.38□□□□□ -1.23
LIG1-210ENST00000596332 OSTCQ9NRP0 149 aa7.38□□□□□ -1.23
LIG1-210ENST00000596332 MSRB1Q9NZV6 116 aa7.38□□□□□ -1.23
LIG1-210ENST00000596332 Q9UF83 564 aa7.38□□□□□ -1.23
LIG1-210ENST00000596332 NAT8Q9UHE5 227 aa7.38□□□□□ -1.23
LIG1-210ENST00000596332 KIF25-AS1Q9Y6Z4 181 aa7.38□□□□□ -1.23
LIG1-210ENST00000596332 NACAE9PAV3 2078 aa7.38□□□□□ -1.23
LIG1-210ENST00000596332 SACSQ9NZJ4 4579 aa7.38□□□□□ -1.23
LIG1-210ENST00000596332 IGHV4-4A0A075B6R2 117 aa7.37□□□□□ -1.23
LIG1-210ENST00000596332 TRAV4A0A0B4J268 109 aa7.37□□□□□ -1.23
LIG1-210ENST00000596332 F8W036 122 aa7.37□□□□□ -1.23
LIG1-210ENST00000596332 P01737 135 aa7.37□□□□□ -1.23
LIG1-210ENST00000596332 IGHV3-53P01767 116 aa7.37□□□□□ -1.23
LIG1-210ENST00000596332 TMEM88Q6PEY1 159 aa7.37□□□□□ -1.23
LIG1-210ENST00000596332 NDUFAF3Q9BU61 184 aa7.37□□□□□ -1.23
LIG1-210ENST00000596332 CNFNQ9BYD5 112 aa7.37□□□□□ -1.23
LIG1-210ENST00000596332 RPP21Q9H633 154 aaKnown RBP7.37□□□□□ -1.23
LIG1-210ENST00000596332 BIN3Q9NQY0 253 aa7.37□□□□□ -1.23
LIG1-210ENST00000596332 TRGV2A0A075B6R0 118 aa7.36□□□□□ -1.23
LIG1-210ENST00000596332 IGLL5B9A064 214 aa7.36□□□□□ -1.23
LIG1-210ENST00000596332 F5H768 121 aa7.36□□□□□ -1.23
LIG1-210ENST00000596332 HTN3P15516 51 aa7.36□□□□□ -1.23
LIG1-210ENST00000596332 S100A4P26447 101 aaKnown RBP7.36□□□□□ -1.23
LIG1-210ENST00000596332 CRYBA4P53673 196 aa7.36□□□□□ -1.23
LIG1-210ENST00000596332 LYZL1Q6UWQ5 148 aa7.36□□□□□ -1.23
LIG1-210ENST00000596332 DAZAP1Q96EP5 407 aaKnown RBP7.36□□□□□ -1.23
LIG1-210ENST00000596332 SFRP2Q96HF1 295 aa7.36□□□□□ -1.23
LIG1-210ENST00000596332 FAM210BQ96KR6 192 aa7.36□□□□□ -1.23
LIG1-210ENST00000596332 GATCO43716 136 aaKnown RBP7.35□□□□□ -1.23
LIG1-210ENST00000596332 GATA1P15976 413 aaPredicted RBP7.35□□□□□ -1.23
LIG1-210ENST00000596332 CTRLP40313 264 aa7.35□□□□□ -1.23
LIG1-210ENST00000596332 ERVFC1-1P60608 527 aa7.35□□□□□ -1.23
LIG1-210ENST00000596332 RPS20P60866 119 aaKnown RBP7.35□□□□□ -1.23
LIG1-210ENST00000596332 CT83Q5H943 113 aa7.35□□□□□ -1.23
LIG1-210ENST00000596332 FER1L6-AS1Q8NA97 138 aa7.35□□□□□ -1.23
LIG1-210ENST00000596332 RYR3Q15413 4870 aa7.34□□□□□ -1.23
LIG1-210ENST00000596332 ALMS1Q8TCU4 4167 aa7.34□□□□□ -1.23
LIG1-210ENST00000596332 TRAV26-1A0A087WT03 109 aa7.34□□□□□ -1.23
LIG1-210ENST00000596332 H3BNG1 76 aa7.34□□□□□ -1.23
LIG1-210ENST00000596332 M0R381 172 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms