RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 C6orf223Q8N319 242 aa11.06□□□□□ -0.64
USHBP1-205ENST00000595993 LYPD6BQ8NI32 183 aa11.06□□□□□ -0.64
USHBP1-205ENST00000595993 RASL10AQ92737 203 aa11.06□□□□□ -0.64
USHBP1-205ENST00000595993 C9orf85Q96MD7 179 aa11.06□□□□□ -0.64
USHBP1-205ENST00000595993 MLST8Q9BVC4 326 aa11.06□□□□□ -0.64
USHBP1-205ENST00000595993 TRAV26-1A0A087WT03 109 aa11.05□□□□□ -0.64
USHBP1-205ENST00000595993 A0A0J9YY99 117 aa11.05□□□□□ -0.64
USHBP1-205ENST00000595993 M0R2P5 195 aa11.05□□□□□ -0.64
USHBP1-205ENST00000595993 RNASE3P12724 160 aaKnown RBP11.05□□□□□ -0.64
USHBP1-205ENST00000595993 BLOC1S1P78537 153 aa11.05□□□□□ -0.64
USHBP1-205ENST00000595993 FAM162BQ5T6X4 162 aa11.05□□□□□ -0.64
USHBP1-205ENST00000595993 BAGE2Q86Y30 109 aa11.05□□□□□ -0.64
USHBP1-205ENST00000595993 TXNDC17Q9BRA2 123 aa11.05□□□□□ -0.64
USHBP1-205ENST00000595993 VAX2Q9UIW0 290 aa11.05□□□□□ -0.64
USHBP1-205ENST00000595993 HERC1Q15751 4861 aa11.05□□□□□ -0.64
USHBP1-205ENST00000595993 KRBOX1C9JBD0 128 aa11.04□□□□□ -0.64
USHBP1-205ENST00000595993 M0R036 132 aa11.04□□□□□ -0.64
USHBP1-205ENST00000595993 SFTA3P0C7M3 94 aa11.04□□□□□ -0.64
USHBP1-205ENST00000595993 MAPKAPK5-AS1Q8N8E1 139 aa11.04□□□□□ -0.64
USHBP1-205ENST00000595993 VSIG2Q96IQ7 327 aa11.04□□□□□ -0.64
USHBP1-205ENST00000595993 RAB19A4D1S5 217 aa11.03□□□□□ -0.64
USHBP1-205ENST00000595993 B4DEV8 164 aa11.03□□□□□ -0.64
USHBP1-205ENST00000595993 PDE6DO43924 150 aa11.03□□□□□ -0.64
USHBP1-205ENST00000595993 NUDT3O95989 172 aa11.03□□□□□ -0.64
USHBP1-205ENST00000595993 ORM1P02763 201 aa11.03□□□□□ -0.64
USHBP1-205ENST00000595993 CENPWQ5EE01 88 aa11.03□□□□□ -0.64
USHBP1-205ENST00000595993 ZNF479Q96JC4 524 aa11.03□□□□□ -0.64
USHBP1-205ENST00000595993 TRBV20OR9-2A0A075B6H5 130 aa11.02□□□□□ -0.65
USHBP1-205ENST00000595993 GRIFINA4D1Z8 144 aa11.02□□□□□ -0.65
USHBP1-205ENST00000595993 PGPEP1LA6NFU8 196 aa11.02□□□□□ -0.65
USHBP1-205ENST00000595993 IGLV2-8P01709 118 aa11.02□□□□□ -0.65
USHBP1-205ENST00000595993 FHL2Q14192 279 aa11.02□□□□□ -0.65
USHBP1-205ENST00000595993 LINC01559Q495D7 138 aa11.02□□□□□ -0.65
USHBP1-205ENST00000595993 Q8N1X5 172 aa11.02□□□□□ -0.65
USHBP1-205ENST00000595993 MED9Q9NWA0 146 aa11.02□□□□□ -0.65
USHBP1-205ENST00000595993 LINC00588Q9Y4M8 146 aa11.02□□□□□ -0.65
USHBP1-205ENST00000595993 TMSB15BA0A087X1C1 80 aa11.01□□□□□ -0.65
USHBP1-205ENST00000595993 C9JCJ5 164 aa11.01□□□□□ -0.65
USHBP1-205ENST00000595993 ASIPP42127 132 aa11.01□□□□□ -0.65
USHBP1-205ENST00000595993 DNLZQ5SXM8 178 aa11.01□□□□□ -0.65
USHBP1-205ENST00000595993 PCNPQ8WW12 178 aaKnown RBP11.01□□□□□ -0.65
USHBP1-205ENST00000595993 TRAV4A0A0B4J268 109 aa11□□□□□ -0.65
USHBP1-205ENST00000595993 H3BVH4 76 aa11□□□□□ -0.65
USHBP1-205ENST00000595993 TAGLN2P37802 199 aaKnown RBP11□□□□□ -0.65
USHBP1-205ENST00000595993 CCL18P55774 89 aa11□□□□□ -0.65
USHBP1-205ENST00000595993 RPL19P84098 196 aaKnown RBP11□□□□□ -0.65
USHBP1-205ENST00000595993 ZNF876PQ49A33 203 aa11□□□□□ -0.65
USHBP1-205ENST00000595993 ZNF506Q5JVG8 444 aa11□□□□□ -0.65
USHBP1-205ENST00000595993 PRR27Q6MZM9 219 aa11□□□□□ -0.65
USHBP1-205ENST00000595993 TEX261Q6UWH6 196 aa11□□□□□ -0.65
USHBP1-205ENST00000595993 RBFOX3A6NFN3 312 aa10.99□□□□□ -0.65
USHBP1-205ENST00000595993 H3BNG1 76 aa10.99□□□□□ -0.65
USHBP1-205ENST00000595993 S100A4P26447 101 aaKnown RBP10.99□□□□□ -0.65
USHBP1-205ENST00000595993 CRYBA4P53673 196 aa10.99□□□□□ -0.65
USHBP1-205ENST00000595993 PTH2Q96A98 100 aa10.99□□□□□ -0.65
USHBP1-205ENST00000595993 IL36BQ9NZH7 164 aa10.99□□□□□ -0.65
USHBP1-205ENST00000595993 TRGV4A0A0C4DH28 118 aa10.98□□□□□ -0.65
USHBP1-205ENST00000595993 RS1O15537 224 aa10.98□□□□□ -0.65
USHBP1-205ENST00000595993 ARMS2P0C7Q2 107 aa10.98□□□□□ -0.65
USHBP1-205ENST00000595993 GNG4P50150 75 aa10.98□□□□□ -0.65
USHBP1-205ENST00000595993 TOR2AQ5JU69 321 aa10.98□□□□□ -0.65
USHBP1-205ENST00000595993 OR4C5Q8NGB2 326 aa10.98□□□□□ -0.65
USHBP1-205ENST00000595993 KRTAP1-5Q9BYS1 174 aa10.98□□□□□ -0.65
USHBP1-205ENST00000595993 PRO0255Q9UI72 69 aa10.98□□□□□ -0.65
USHBP1-205ENST00000595993 HHLA3Q9XRX5 114 aa10.98□□□□□ -0.65
USHBP1-205ENST00000595993 A0A096LPF7 62 aa10.97□□□□□ -0.65
USHBP1-205ENST00000595993 PAX4O43316 350 aa10.97□□□□□ -0.65
USHBP1-205ENST00000595993 MGST1P10620 155 aaKnown RBP10.97□□□□□ -0.65
USHBP1-205ENST00000595993 CFAP126Q5VTH2 177 aa10.97□□□□□ -0.65
USHBP1-205ENST00000595993 SCRT2Q9NQ03 307 aa10.97□□□□□ -0.65
USHBP1-205ENST00000595993 SMIM12Q96EX1 92 aa10.96□□□□□ -0.65
USHBP1-205ENST00000595993 FAM210AQ96ND0 272 aa10.96□□□□□ -0.65
USHBP1-205ENST00000595993 PARLQ9H300 379 aa10.96□□□□□ -0.65
USHBP1-205ENST00000595993 C19orf71A6NCJ1 209 aa10.95□□□□□ -0.66
USHBP1-205ENST00000595993 TMEM250H0YL14 139 aa10.95□□□□□ -0.66
USHBP1-205ENST00000595993 BTF3P20290 206 aaKnown RBP10.95□□□□□ -0.66
USHBP1-205ENST00000595993 DMRTA1Q5VZB9 504 aa10.95□□□□□ -0.66
USHBP1-205ENST00000595993 SPATA12Q7Z6I5 190 aa10.95□□□□□ -0.66
USHBP1-205ENST00000595993 UPK3BQ9BT76 320 aa10.95□□□□□ -0.66
USHBP1-205ENST00000595993 Q9H8V8 135 aa10.95□□□□□ -0.66
USHBP1-205ENST00000595993 JPT2Q9H910 190 aa10.95□□□□□ -0.66
USHBP1-205ENST00000595993 IGHV3-73A0A0B4J1V6 119 aa10.94□□□□□ -0.66
USHBP1-205ENST00000595993 LOC100131303A0A0U1RQF7 123 aa10.94□□□□□ -0.66
USHBP1-205ENST00000595993 K7EN84 100 aa10.94□□□□□ -0.66
USHBP1-205ENST00000595993 CXCL1P09341 107 aa10.94□□□□□ -0.66
USHBP1-205ENST00000595993 GATA1P15976 413 aaPredicted RBP10.94□□□□□ -0.66
USHBP1-205ENST00000595993 SLAQ13239 276 aa10.94□□□□□ -0.66
USHBP1-205ENST00000595993 ESRGQ1W209 222 aa10.94□□□□□ -0.66
USHBP1-205ENST00000595993 EIF5A2Q9GZV4 153 aaKnown RBP10.94□□□□□ -0.66
USHBP1-205ENST00000595993 ICOSQ9Y6W8 199 aa10.94□□□□□ -0.66
USHBP1-205ENST00000595993 KRTAP10-2P60368 255 aa10.93□□□□□ -0.66
USHBP1-205ENST00000595993 TTC32Q5I0X7 151 aa10.93□□□□□ -0.66
USHBP1-205ENST00000595993 PIK3CD-AS1Q5SR53 167 aa10.93□□□□□ -0.66
USHBP1-205ENST00000595993 SAMD10Q9BYL1 202 aa10.93□□□□□ -0.66
USHBP1-205ENST00000595993 A0A1W2PPQ1 181 aa10.92□□□□□ -0.66
USHBP1-205ENST00000595993 M0R381 172 aa10.92□□□□□ -0.66
USHBP1-205ENST00000595993 SRP19P09132 144 aaKnown RBP10.92□□□□□ -0.66
USHBP1-205ENST00000595993 GZMBP10144 247 aa10.92□□□□□ -0.66
USHBP1-205ENST00000595993 GYPEP15421 78 aa10.92□□□□□ -0.66
USHBP1-205ENST00000595993 UFSP1Q6NVU6 142 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms