RNA–Protein interactions for RNA: ENST00000595235.5

SSX4B-201, Transcript of SSX family member 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4B, Length 1,221 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-201ENST00000595235 NEGR1Q7Z3B1 354 aa3.99□□□□□ -1.77
SSX4B-201ENST00000595235 WFDC10BQ8IUB3 73 aa3.99□□□□□ -1.77
SSX4B-201ENST00000595235 KCNRGQ8N5I3 272 aa3.99□□□□□ -1.77
SSX4B-201ENST00000595235 TNFRSF18Q9Y5U5 241 aa3.99□□□□□ -1.77
SSX4B-201ENST00000595235 PCLOQ9Y6V0 5065 aa3.99□□□□□ -1.77
SSX4B-201ENST00000595235 PKHD1P08F94 4074 aa3.98□□□□□ -1.77
SSX4B-201ENST00000595235 FBLL1A6NHQ2 334 aaKnown RBP3.98□□□□□ -1.77
SSX4B-201ENST00000595235 C16orf90A8MZG2 172 aa3.98□□□□□ -1.77
SSX4B-201ENST00000595235 BCL2L11O43521 198 aa3.98□□□□□ -1.77
SSX4B-201ENST00000595235 ORM1P02763 201 aa3.98□□□□□ -1.77
SSX4B-201ENST00000595235 CRIP1P50238 77 aa3.98□□□□□ -1.77
SSX4B-201ENST00000595235 KRTAP10-2P60368 255 aa3.98□□□□□ -1.77
SSX4B-201ENST00000595235 ZNF876PQ49A33 203 aa3.98□□□□□ -1.77
SSX4B-201ENST00000595235 ZNF506Q5JVG8 444 aa3.98□□□□□ -1.77
SSX4B-201ENST00000595235 SAPCD1Q5SSQ6 148 aa3.98□□□□□ -1.77
SSX4B-201ENST00000595235 CFAP126Q5VTH2 177 aa3.98□□□□□ -1.77
SSX4B-201ENST00000595235 SPATA12Q7Z6I5 190 aa3.98□□□□□ -1.77
SSX4B-201ENST00000595235 PCNPQ8WW12 178 aaKnown RBP3.98□□□□□ -1.77
SSX4B-201ENST00000595235 HIST1H2BAQ96A08 127 aa3.98□□□□□ -1.77
SSX4B-201ENST00000595235 ZC2HC1AQ96GY0 325 aa3.98□□□□□ -1.77
SSX4B-201ENST00000595235 A0A1B0GV50 99 aa3.97□□□□□ -1.77
SSX4B-201ENST00000595235 HMSDA8MTL9 139 aa3.97□□□□□ -1.77
SSX4B-201ENST00000595235 FABP5P3A8MUU1 101 aa3.97□□□□□ -1.77
SSX4B-201ENST00000595235 H3BVH4 76 aa3.97□□□□□ -1.77
SSX4B-201ENST00000595235 M0R036 132 aa3.97□□□□□ -1.77
SSX4B-201ENST00000595235 PAGE4O60829 102 aa3.97□□□□□ -1.77
SSX4B-201ENST00000595235 SEC11BP0C7V7 166 aa3.97□□□□□ -1.77
SSX4B-201ENST00000595235 BTF3P20290 206 aaKnown RBP3.97□□□□□ -1.77
SSX4B-201ENST00000595235 FUSP35637 526 aaKnown RBP eCLIP3.97□□□□□ -1.77
SSX4B-201ENST00000595235 ASIPP42127 132 aa3.97□□□□□ -1.77
SSX4B-201ENST00000595235 PPT1P50897 306 aa3.97□□□□□ -1.77
SSX4B-201ENST00000595235 CST9LP1Q5W188 147 aa3.97□□□□□ -1.77
SSX4B-201ENST00000595235 SLC25A29Q8N8R3 303 aa3.97□□□□□ -1.77
SSX4B-201ENST00000595235 NHLRC2Q8NBF2 726 aa3.97□□□□□ -1.77
SSX4B-201ENST00000595235 FAM213BQ8TBF2 198 aa3.97□□□□□ -1.77
SSX4B-201ENST00000595235 PTH2Q96A98 100 aa3.97□□□□□ -1.77
SSX4B-201ENST00000595235 FMC1Q96HJ9 113 aa3.97□□□□□ -1.77
SSX4B-201ENST00000595235 TXNDC17Q9BRA2 123 aa3.97□□□□□ -1.77
SSX4B-201ENST00000595235 ZNF471Q9BX82 626 aaPredicted RBP3.97□□□□□ -1.77
SSX4B-201ENST00000595235 NKX6-2Q9C056 277 aaPredicted RBP3.97□□□□□ -1.77
SSX4B-201ENST00000595235 PARLQ9H300 379 aa3.97□□□□□ -1.77
SSX4B-201ENST00000595235 JPT2Q9H910 190 aa3.97□□□□□ -1.77
SSX4B-201ENST00000595235 A0A0D9SG52 128 aa3.96□□□□□ -1.78
SSX4B-201ENST00000595235 TRBV6-1A0A0K0K1D8 114 aa3.96□□□□□ -1.78
SSX4B-201ENST00000595235 TRBV6-4A0A1B0GX49 114 aa3.96□□□□□ -1.78
SSX4B-201ENST00000595235 KANTRA0A1W2PQU2 76 aa3.96□□□□□ -1.78
SSX4B-201ENST00000595235 GRIFINA4D1Z8 144 aa3.96□□□□□ -1.78
SSX4B-201ENST00000595235 B4DEV8 164 aa3.96□□□□□ -1.78
SSX4B-201ENST00000595235 KRBOX1C9JBD0 128 aa3.96□□□□□ -1.78
SSX4B-201ENST00000595235 SH2D1AO60880 128 aa3.96□□□□□ -1.78
SSX4B-201ENST00000595235 LTAP01374 205 aa3.96□□□□□ -1.78
SSX4B-201ENST00000595235 DNAH10OSP0CZ25 163 aa3.96□□□□□ -1.78
SSX4B-201ENST00000595235 S100A4P26447 101 aaKnown RBP3.96□□□□□ -1.78
SSX4B-201ENST00000595235 AKR1C3P42330 323 aa3.96□□□□□ -1.78
SSX4B-201ENST00000595235 UBE2G1P62253 170 aa3.96□□□□□ -1.78
SSX4B-201ENST00000595235 RHOHQ15669 191 aa3.96□□□□□ -1.78
SSX4B-201ENST00000595235 ZNF674Q2M3X9 581 aa3.96□□□□□ -1.78
SSX4B-201ENST00000595235 UFSP1Q6NVU6 142 aa3.96□□□□□ -1.78
SSX4B-201ENST00000595235 Q6ZSN1 163 aa3.96□□□□□ -1.78
SSX4B-201ENST00000595235 TMUB2Q71RG4 321 aa3.96□□□□□ -1.78
SSX4B-201ENST00000595235 COX8CQ7Z4L0 72 aa3.96□□□□□ -1.78
SSX4B-201ENST00000595235 STOML3Q8TAV4 291 aa3.96□□□□□ -1.78
SSX4B-201ENST00000595235 SFT2D1Q8WV19 159 aa3.96□□□□□ -1.78
SSX4B-201ENST00000595235 MBD3L1Q8WWY6 194 aa3.96□□□□□ -1.78
SSX4B-201ENST00000595235 PRADC1Q9BSG0 188 aa3.96□□□□□ -1.78
SSX4B-201ENST00000595235 SAMD10Q9BYL1 202 aa3.96□□□□□ -1.78
SSX4B-201ENST00000595235 KRTAP4-5Q9BYR2 181 aa3.96□□□□□ -1.78
SSX4B-201ENST00000595235 IL36BQ9NZH7 164 aa3.96□□□□□ -1.78
SSX4B-201ENST00000595235 Q9UF83 564 aa3.96□□□□□ -1.78
SSX4B-201ENST00000595235 ZFP30Q9Y2G7 519 aa3.96□□□□□ -1.78
SSX4B-201ENST00000595235 LY96Q9Y6Y9 160 aa3.96□□□□□ -1.78
SSX4B-201ENST00000595235 DNAH5Q8TE73 4624 aa3.96□□□□□ -1.78
SSX4B-201ENST00000595235 LRP1BQ9NZR2 4599 aa3.96□□□□□ -1.78
SSX4B-201ENST00000595235 ABCA13Q86UQ4 5058 aa3.95□□□□□ -1.78
SSX4B-201ENST00000595235 TMSB15BA0A087X1C1 80 aa3.95□□□□□ -1.78
SSX4B-201ENST00000595235 UMAD1C9J7I0 102 aa3.95□□□□□ -1.78
SSX4B-201ENST00000595235 CIDEAO60543 219 aa3.95□□□□□ -1.78
SSX4B-201ENST00000595235 ARMS2P0C7Q2 107 aa3.95□□□□□ -1.78
SSX4B-201ENST00000595235 LINC00694P0DN24 101 aa3.95□□□□□ -1.78
SSX4B-201ENST00000595235 MGST1P10620 155 aaKnown RBP3.95□□□□□ -1.78
SSX4B-201ENST00000595235 TIRAPP58753 221 aa3.95□□□□□ -1.78
SSX4B-201ENST00000595235 LGALSLQ3ZCW2 172 aaPredicted RBP3.95□□□□□ -1.78
SSX4B-201ENST00000595235 DNLZQ5SXM8 178 aa3.95□□□□□ -1.78
SSX4B-201ENST00000595235 FAM162BQ5T6X4 162 aa3.95□□□□□ -1.78
SSX4B-201ENST00000595235 SH2D6Q7Z4S9 175 aa3.95□□□□□ -1.78
SSX4B-201ENST00000595235 C14orf178Q8N769 122 aaPredicted RBP3.95□□□□□ -1.78
SSX4B-201ENST00000595235 TCEAL7Q9BRU2 100 aa3.95□□□□□ -1.78
SSX4B-201ENST00000595235 MSRB1Q9NZV6 116 aa3.95□□□□□ -1.78
SSX4B-201ENST00000595235 APOBP04114 4563 aaKnown RBP3.95□□□□□ -1.78
SSX4B-201ENST00000595235 HSPG2P98160 4391 aa3.94□□□□□ -1.78
SSX4B-201ENST00000595235 A0A087WWL8 130 aa3.94□□□□□ -1.78
SSX4B-201ENST00000595235 IGHV3-38A0A0C4DH36 116 aa3.94□□□□□ -1.78
SSX4B-201ENST00000595235 GAGE12JA6NER3 117 aa3.94□□□□□ -1.78
SSX4B-201ENST00000595235 A8MWV9 139 aa3.94□□□□□ -1.78
SSX4B-201ENST00000595235 M0R381 172 aa3.94□□□□□ -1.78
SSX4B-201ENST00000595235 PFDN1O60925 122 aa3.94□□□□□ -1.78
SSX4B-201ENST00000595235 CDK2AP2O75956 126 aa3.94□□□□□ -1.78
SSX4B-201ENST00000595235 IGHV3-30P01768 117 aa3.94□□□□□ -1.78
SSX4B-201ENST00000595235 IGHV3-33P01772 117 aa3.94□□□□□ -1.78
SSX4B-201ENST00000595235 CRYGDP07320 174 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms