RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 RNASE4P34096 147 aaKnown RBP9.59□□□□□ -0.87
LIG1-207ENST00000594759 TMEM200BQ69YZ2 307 aa9.59□□□□□ -0.87
LIG1-207ENST00000594759 TRBV6-1A0A0K0K1D8 114 aa9.59□□□□□ -0.87
LIG1-207ENST00000594759 C1orf162Q8NEQ5 155 aaPredicted RBP9.59□□□□□ -0.87
LIG1-207ENST00000594759 NRGNQ92686 78 aa9.59□□□□□ -0.87
LIG1-207ENST00000594759 GAFA1Q96PS6 74 aa9.59□□□□□ -0.87
LIG1-207ENST00000594759 LOC107984640A0A0U1RRK4 108 aa9.59□□□□□ -0.87
LIG1-207ENST00000594759 A0A1B0GX51 115 aa9.59□□□□□ -0.87
LIG1-207ENST00000594759 MRPS12O15235 138 aaKnown RBP9.59□□□□□ -0.87
LIG1-207ENST00000594759 LRRC75A-AS1Q8N1F1 130 aa9.59□□□□□ -0.87
LIG1-207ENST00000594759 ZNF491Q8N8L2 437 aa9.59□□□□□ -0.87
LIG1-207ENST00000594759 TIMM21Q9BVV7 248 aa9.59□□□□□ -0.87
LIG1-207ENST00000594759 LGALS9O00182 355 aa9.58□□□□□ -0.88
LIG1-207ENST00000594759 SMCPP49901 116 aaPredicted RBP9.58□□□□□ -0.88
LIG1-207ENST00000594759 CRIP1P50238 77 aa9.58□□□□□ -0.88
LIG1-207ENST00000594759 SYNJ2BPP57105 145 aa9.58□□□□□ -0.88
LIG1-207ENST00000594759 FAM19A5Q7Z5A7 132 aaPredicted RBP9.58□□□□□ -0.88
LIG1-207ENST00000594759 TRGV3P03979 118 aa9.58□□□□□ -0.88
LIG1-207ENST00000594759 TLN2Q9Y4G6 2542 aa9.58□□□□□ -0.88
LIG1-207ENST00000594759 CNTFRP26992 372 aa9.58□□□□□ -0.88
LIG1-207ENST00000594759 IGKV3D-20A0A0C4DH25 116 aa9.58□□□□□ -0.88
LIG1-207ENST00000594759 IGKV3-15P01624 115 aa9.58□□□□□ -0.88
LIG1-207ENST00000594759 BAALCQ8WXS3 180 aa9.58□□□□□ -0.88
LIG1-207ENST00000594759 TMEM141Q96I45 108 aa9.58□□□□□ -0.88
LIG1-207ENST00000594759 MYO9AB2RTY4 2548 aa9.57□□□□□ -0.88
LIG1-207ENST00000594759 ADARB2-AS1A8MUL3 147 aa9.57□□□□□ -0.88
LIG1-207ENST00000594759 RNASE1P07998 156 aaKnown RBP9.57□□□□□ -0.88
LIG1-207ENST00000594759 C11orf86A6NJI1 115 aa9.57□□□□□ -0.88
LIG1-207ENST00000594759 CD28P10747 220 aa9.57□□□□□ -0.88
LIG1-207ENST00000594759 LINC00643Q86TS7 51 aa9.57□□□□□ -0.88
LIG1-207ENST00000594759 PEMTQ9UBM1 199 aa9.57□□□□□ -0.88
LIG1-207ENST00000594759 CEP192Q8TEP8 1941 aa9.57□□□□□ -0.88
LIG1-207ENST00000594759 VCANP13611 3396 aa9.57□□□□□ -0.88
LIG1-207ENST00000594759 ATP5G1P05496 136 aa9.57□□□□□ -0.88
LIG1-207ENST00000594759 SONP18583 2426 aaKnown RBP9.57□□□□□ -0.88
LIG1-207ENST00000594759 IGHV1-46P01743 117 aa9.56□□□□□ -0.88
LIG1-207ENST00000594759 ICOSQ9Y6W8 199 aa9.56□□□□□ -0.88
LIG1-207ENST00000594759 A0A0J9YY99 117 aa9.56□□□□□ -0.88
LIG1-207ENST00000594759 LINC01619G3V211 115 aa9.56□□□□□ -0.88
LIG1-207ENST00000594759 CFHR4Q92496 578 aa9.56□□□□□ -0.88
LIG1-207ENST00000594759 WDFY4Q6ZS81 3184 aa9.56□□□□□ -0.88
LIG1-207ENST00000594759 CFAP54Q96N23 3096 aa9.56□□□□□ -0.88
LIG1-207ENST00000594759 hADV29S1A0JD25 119 aa9.56□□□□□ -0.88
LIG1-207ENST00000594759 IGKV1-17P01599 117 aa9.56□□□□□ -0.88
LIG1-207ENST00000594759 IGHG3P01860 377 aa9.56□□□□□ -0.88
LIG1-207ENST00000594759 UBE2D3P61077 147 aa9.56□□□□□ -0.88
LIG1-207ENST00000594759 UBE2D2P62837 147 aa9.56□□□□□ -0.88
LIG1-207ENST00000594759 ZMAT4Q9H898 229 aa9.56□□□□□ -0.88
LIG1-207ENST00000594759 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.55□□□□□ -0.88
LIG1-207ENST00000594759 TMEM219Q86XT9 240 aa9.55□□□□□ -0.88
LIG1-207ENST00000594759 NBR2O15453 112 aa9.55□□□□□ -0.88
LIG1-207ENST00000594759 IGLV2-11P01706 119 aa9.55□□□□□ -0.88
LIG1-207ENST00000594759 A0A0B4J2C4 111 aa9.55□□□□□ -0.88
LIG1-207ENST00000594759 CLEC2BQ92478 149 aa9.55□□□□□ -0.88
LIG1-207ENST00000594759 TET2Q6N021 2002 aaPredicted RBP9.55□□□□□ -0.88
LIG1-207ENST00000594759 VPS13AQ96RL7 3174 aa9.55□□□□□ -0.88
LIG1-207ENST00000594759 SETD2Q9BYW2 2564 aaPredicted RBP9.55□□□□□ -0.88
LIG1-207ENST00000594759 C17orf100A8MU93 164 aa9.54□□□□□ -0.88
LIG1-207ENST00000594759 UBE2D1P51668 147 aa9.54□□□□□ -0.88
LIG1-207ENST00000594759 PIP4P1Q86T03 277 aa9.54□□□□□ -0.88
LIG1-207ENST00000594759 TOMM6Q96B49 74 aa9.54□□□□□ -0.88
LIG1-207ENST00000594759 IGHV3-33P01772 117 aa9.54□□□□□ -0.88
LIG1-207ENST00000594759 ZNF415Q09FC8 603 aa9.54□□□□□ -0.88
LIG1-207ENST00000594759 SLC25A29Q8N8R3 303 aa9.54□□□□□ -0.88
LIG1-207ENST00000594759 PRSS33Q8NF86 280 aa9.54□□□□□ -0.88
LIG1-207ENST00000594759 RPL39LQ96EH5 51 aaKnown RBP9.54□□□□□ -0.88
LIG1-207ENST00000594759 USP9YO00507 2555 aaPredicted RBP9.54□□□□□ -0.88
LIG1-207ENST00000594759 LAMA1P25391 3075 aa9.54□□□□□ -0.88
LIG1-207ENST00000594759 IGHV1-3A0A0C4DH29 117 aa9.54□□□□□ -0.88
LIG1-207ENST00000594759 INS-IGF2F8WCM5 200 aa9.54□□□□□ -0.88
LIG1-207ENST00000594759 GAS8-AS1O95177 125 aa9.54□□□□□ -0.88
LIG1-207ENST00000594759 SPRNQ5BIV9 151 aa9.54□□□□□ -0.88
LIG1-207ENST00000594759 DYNAPQ8N1N2 210 aa9.54□□□□□ -0.88
LIG1-207ENST00000594759 NDUFA12Q9UI09 145 aa9.54□□□□□ -0.88
LIG1-207ENST00000594759 A0A0G2JNJ9 132 aa9.53□□□□□ -0.88
LIG1-207ENST00000594759 RBAKDNA6NC62 111 aa9.53□□□□□ -0.88
LIG1-207ENST00000594759 C10orf142B7Z368 130 aa9.53□□□□□ -0.88
LIG1-207ENST00000594759 SPRY2O43597 315 aa9.53□□□□□ -0.88
LIG1-207ENST00000594759 CLEC19AQ6UXS0 136 aa9.53□□□□□ -0.88
LIG1-207ENST00000594759 Q9UFV3 132 aa9.53□□□□□ -0.88
LIG1-207ENST00000594759 IGHV1-8P0DP01 117 aa9.53□□□□□ -0.88
LIG1-207ENST00000594759 CRIP2P52943 208 aaPredicted RBP9.53□□□□□ -0.88
LIG1-207ENST00000594759 DPM3Q9P2X0 92 aa9.53□□□□□ -0.88
LIG1-207ENST00000594759 DNAH14Q0VDD8 3507 aa9.53□□□□□ -0.88
LIG1-207ENST00000594759 A0A087WWL8 130 aa9.53□□□□□ -0.88
LIG1-207ENST00000594759 LY6HO94772 140 aa9.53□□□□□ -0.88
LIG1-207ENST00000594759 ZNF80P51504 273 aaPredicted RBP9.53□□□□□ -0.88
LIG1-207ENST00000594759 PIP4P2Q8N4L2 257 aa9.53□□□□□ -0.88
LIG1-207ENST00000594759 RNF185Q96GF1 192 aa9.53□□□□□ -0.88
LIG1-207ENST00000594759 TRAV25A0A0B4J276 109 aa9.52□□□□□ -0.88
LIG1-207ENST00000594759 BAALC-AS2P0C853 105 aa9.52□□□□□ -0.88
LIG1-207ENST00000594759 SDHAF1A6NFY7 115 aa9.52□□□□□ -0.89
LIG1-207ENST00000594759 EEF1AKMT3Q96AZ1 226 aa9.52□□□□□ -0.89
LIG1-207ENST00000594759 ZNF625Q96I27 306 aaPredicted RBP9.52□□□□□ -0.89
LIG1-207ENST00000594759 IMUPQ9GZP8 106 aa9.52□□□□□ -0.89
LIG1-207ENST00000594759 ABCA2Q9BZC7 2435 aa9.52□□□□□ -0.89
LIG1-207ENST00000594759 ZNF876PQ49A33 203 aa9.52□□□□□ -0.89
LIG1-207ENST00000594759 KLK5Q9Y337 293 aaPredicted RBP9.52□□□□□ -0.89
LIG1-207ENST00000594759 IGKV3D-7A0A0C4DH55 119 aa9.51□□□□□ -0.89
LIG1-207ENST00000594759 KHDC1LQ5JSQ8 128 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 183.5 ms